RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 AAASQ9NRG9 546 aa23.91■■□□□ 1.42
UFD1-201ENST00000263202 TMEM191CA6NGB0 347 aa23.9■■□□□ 1.42
UFD1-201ENST00000263202 SIGLEC16A6NMB1 481 aa23.9■■□□□ 1.42
UFD1-201ENST00000263202 SOD2P04179 222 aa23.9■■□□□ 1.42
UFD1-201ENST00000263202 ACADSBP45954 432 aa23.9■■□□□ 1.42
UFD1-201ENST00000263202 RPL7AP62424 266 aaKnown RBP23.9■■□□□ 1.42
UFD1-201ENST00000263202 TAP1Q03518 808 aa23.9■■□□□ 1.42
UFD1-201ENST00000263202 PRSS55Q6UWB4 352 aaPredicted RBP23.9■■□□□ 1.42
UFD1-201ENST00000263202 RSPO2Q6UXX9 243 aaPredicted RBP23.9■■□□□ 1.42
UFD1-201ENST00000263202 SPATA2LQ8IUW3 424 aaPredicted RBP23.9■■□□□ 1.42
UFD1-201ENST00000263202 KCTD13Q8WZ19 329 aa23.9■■□□□ 1.42
UFD1-201ENST00000263202 CLP1Q92989 425 aaKnown RBP23.9■■□□□ 1.42
UFD1-201ENST00000263202 KCNK16Q96T55 309 aa23.9■■□□□ 1.42
UFD1-201ENST00000263202 SELENOOQ9BVL4 669 aa23.9■■□□□ 1.42
UFD1-201ENST00000263202 OXCT2Q9BYC2 517 aaPredicted RBP23.9■■□□□ 1.42
UFD1-201ENST00000263202 NCK2O43639 380 aa23.89■■□□□ 1.42
UFD1-201ENST00000263202 TLL1O43897 1013 aa23.89■■□□□ 1.42
UFD1-201ENST00000263202 PAPD7Q5XG87 772 aaKnown RBP23.89■■□□□ 1.42
UFD1-201ENST00000263202 OR6B2Q6IFH4 312 aa23.89■■□□□ 1.42
UFD1-201ENST00000263202 NT5DC3Q86UY8 548 aa23.89■■□□□ 1.42
UFD1-201ENST00000263202 MCEEQ96PE7 176 aa23.89■■□□□ 1.42
UFD1-201ENST00000263202 TLR10Q9BXR5 811 aa23.89■■□□□ 1.42
UFD1-201ENST00000263202 PCDHB12Q9Y5F1 795 aa23.89■■□□□ 1.42
UFD1-201ENST00000263202 NR2E3Q9Y5X4 410 aa23.89■■□□□ 1.42
UFD1-201ENST00000263202 ALG6Q9Y672 507 aa23.89■■□□□ 1.42
UFD1-201ENST00000263202 PLXNA4Q9HCM2 1894 aa23.89■■□□□ 1.42
UFD1-201ENST00000263202 TMEM110-MUSTN1A8MSY1 372 aa23.89■■□□□ 1.41
UFD1-201ENST00000263202 PAPSS1O43252 624 aaPredicted RBP23.89■■□□□ 1.41
UFD1-201ENST00000263202 URI1O94763 535 aaPredicted RBP23.89■■□□□ 1.41
UFD1-201ENST00000263202 KRT3P12035 628 aa23.89■■□□□ 1.41
UFD1-201ENST00000263202 PPM1AP35813 382 aa23.89■■□□□ 1.41
UFD1-201ENST00000263202 NFE2Q16621 373 aaPredicted RBP23.89■■□□□ 1.41
UFD1-201ENST00000263202 OLFML1Q6UWY5 402 aa23.89■■□□□ 1.41
UFD1-201ENST00000263202 PEX26Q7Z412 305 aa23.89■■□□□ 1.41
UFD1-201ENST00000263202 DDX53Q86TM3 631 aaKnown RBP23.89■■□□□ 1.41
UFD1-201ENST00000263202 SCUBE3Q8IX30 993 aa23.89■■□□□ 1.41
UFD1-201ENST00000263202 RIN2Q8WYP3 895 aaPredicted RBP23.89■■□□□ 1.41
UFD1-201ENST00000263202 PIK3R5Q8WYR1 880 aa23.89■■□□□ 1.41
UFD1-201ENST00000263202 HERC2P3Q9BVR0 1158 aa23.89■■□□□ 1.41
UFD1-201ENST00000263202 UBXN6Q9BZV1 441 aa23.89■■□□□ 1.41
UFD1-201ENST00000263202 METTL5Q9NRN9 209 aaKnown RBP23.89■■□□□ 1.41
UFD1-201ENST00000263202 PACSIN2Q9UNF0 486 aaPredicted RBP23.89■■□□□ 1.41
UFD1-201ENST00000263202 HYOU1Q9Y4L1 999 aa23.89■■□□□ 1.41
UFD1-201ENST00000263202 GBF1Q92538 1859 aa23.88■■□□□ 1.41
UFD1-201ENST00000263202 HHLA1C9JL84 531 aa23.88■■□□□ 1.41
UFD1-201ENST00000263202 MYO1FO00160 1098 aa23.88■■□□□ 1.41
UFD1-201ENST00000263202 LCP1P13796 627 aa23.88■■□□□ 1.41
UFD1-201ENST00000263202 RABGGTBP53611 331 aa23.88■■□□□ 1.41
UFD1-201ENST00000263202 AMPD2Q01433 879 aa23.88■■□□□ 1.41
UFD1-201ENST00000263202 PTPROQ16827 1216 aa23.88■■□□□ 1.41
UFD1-201ENST00000263202 FAM102AQ5T9C2 384 aaPredicted RBP23.88■■□□□ 1.41
UFD1-201ENST00000263202 DCUN1D2Q6PH85 259 aa23.88■■□□□ 1.41
UFD1-201ENST00000263202 ZDHHC17Q8IUH5 632 aa23.88■■□□□ 1.41
UFD1-201ENST00000263202 PIWIL1Q96J94 861 aaKnown RBP23.88■■□□□ 1.41
UFD1-201ENST00000263202 MTRRQ9UBK8 725 aa23.88■■□□□ 1.41
UFD1-201ENST00000263202 LCHNA4D1U4 455 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 RFC1P35251 1148 aaPredicted RBP23.87■■□□□ 1.41
UFD1-201ENST00000263202 MAGEA10P43363 369 aaPredicted RBP23.87■■□□□ 1.41
UFD1-201ENST00000263202 CFAP221Q4G0U5 840 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 C9orf50Q5SZB4 431 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 KIAA1841Q6NSI8 718 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 JOSD2Q8TAC2 188 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 FUBP3Q96I24 572 aaKnown RBP eCLIP23.87■■□□□ 1.41
UFD1-201ENST00000263202 DMAP1Q9NPF5 467 aaPredicted RBP23.87■■□□□ 1.41
UFD1-201ENST00000263202 ABI2Q9NYB9 513 aaPredicted RBP23.87■■□□□ 1.41
UFD1-201ENST00000263202 AMFRQ9UKV5 643 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 BACE2Q9Y5Z0 518 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 CPB1P15086 417 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 COMTP21964 271 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 CYP2F1P24903 491 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 SLC6A3Q01959 620 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 DSG1Q02413 1049 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 PSMD5Q16401 504 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 FBXO22Q8NEZ5 403 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 CLEC4CQ8WTT0 213 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 PCDHB5Q9Y5E4 795 aa23.87■■□□□ 1.41
UFD1-201ENST00000263202 FGF18O76093 207 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 PROSCO94903 275 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 GLUD2P49448 558 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 ARPP19P56211 112 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 OGDHQ02218 1023 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 ZNF252P-AS1Q0IIN9 211 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 ADIGQ0VDE8 80 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 GPR17Q13304 367 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 RAB41Q5JT25 222 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 CPNE8Q86YQ8 564 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 PGLYRP2Q96PD5 576 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 LRRC4Q9HBW1 653 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 IP6K2Q9UHH9 426 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 TMEM59LQ9UK28 342 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 SNX12Q9UMY4 172 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 CDY1Q9Y6F8 540 aa23.86■■□□□ 1.41
UFD1-201ENST00000263202 C2CD2LO14523 706 aa23.85■■□□□ 1.41
UFD1-201ENST00000263202 SLC8B1Q6J4K2 584 aa23.85■■□□□ 1.41
UFD1-201ENST00000263202 GPRIN1Q7Z2K8 1008 aa23.85■■□□□ 1.41
UFD1-201ENST00000263202 KHSRPQ92945 711 aaKnown RBP eCLIP23.85■■□□□ 1.412e-12■■■□□ 15.4
UFD1-201ENST00000263202 HES6Q96HZ4 224 aa23.85■■□□□ 1.41
UFD1-201ENST00000263202 SAR1BQ9Y6B6 198 aa23.85■■□□□ 1.41
UFD1-201ENST00000263202 ADAM12O43184 909 aa23.84■■□□□ 1.41
UFD1-201ENST00000263202 SCNN1AP37088 669 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms