RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 SKAP2O75563 359 aaPredicted RBP14.26□□□□□ -0.13
VMP1-201ENST00000262291 HMGCRP04035 888 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 MIPP30301 263 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 CRYBB1P53674 252 aaPredicted RBP14.26□□□□□ -0.13
VMP1-201ENST00000262291 SLC25A11Q02978 314 aaKnown RBP14.26□□□□□ -0.13
VMP1-201ENST00000262291 CALCOCO2Q13137 446 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 RNF187Q5TA31 235 aaPredicted RBP14.26□□□□□ -0.13
VMP1-201ENST00000262291 RXFP2Q8WXD0 754 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 PEBP4Q96S96 227 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 PLEKHA5Q9HAU0 1116 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 TMBIM4Q9HC24 238 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 CNTN3Q9P232 1028 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 ACSL3O95573 720 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 MYZAPP0CAP1 466 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 TFE3P19532 575 aaPredicted RBP14.26□□□□□ -0.13
VMP1-201ENST00000262291 NRLP54845 237 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 MTM1Q13496 603 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 FBXO47Q5MNV8 452 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 PPP1R2P3Q6NXS1 205 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 SCYL2Q6P3W7 929 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 LCLAT1Q6UWP7 414 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 ATL2Q8NHH9 583 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 ART4Q93070 314 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 TMEM121Q9BTD3 319 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 TLL2Q9Y6L7 1015 aa14.26□□□□□ -0.13
VMP1-201ENST00000262291 hCG_1818297A0A087WSY0 165 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 GOLGA6L10A6NI86 522 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 DUSP11O75319 330 aaKnown RBP14.25□□□□□ -0.13
VMP1-201ENST00000262291 MAP3K6O95382 1288 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 IFNB1P01574 187 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 CYBAP13498 195 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 LCP1P13796 627 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 ATF2P15336 505 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 PDGFRAP16234 1089 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 IVDP26440 423 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 CDKN2BP42772 138 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 GUCY1A3Q02108 690 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 ZNF365Q70YC5 407 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 APBB1IPQ7Z5R6 666 aaPredicted RBP14.25□□□□□ -0.13
VMP1-201ENST00000262291 CD302Q8IX05 232 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 KBTBD7Q8WVZ9 684 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.25□□□□□ -0.133e-49■■■■■ 158.6
VMP1-201ENST00000262291 RBM41Q96IZ5 413 aaKnown RBP14.25□□□□□ -0.13
VMP1-201ENST00000262291 ATP6V1G3Q96LB4 118 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 KATNAL1Q9BW62 490 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 CALN1Q9BXU9 219 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 MAGEB5Q9BZ81 275 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 AAASQ9NRG9 546 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 MTRF1LQ9UGC7 380 aaKnown RBP14.25□□□□□ -0.13
VMP1-201ENST00000262291 UBQLN1Q9UMX0 589 aaKnown RBP14.25□□□□□ -0.13
VMP1-201ENST00000262291 ST3GAL5Q9UNP4 418 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 NOVA2Q9UNW9 492 aaKnown RBP14.25□□□□□ -0.13
VMP1-201ENST00000262291 TIMM13Q9Y5L4 95 aaPredicted RBP14.25□□□□□ -0.13
VMP1-201ENST00000262291 KPNA7A9QM74 516 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 CLDN5O00501 218 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 PPP1R12AO14974 1030 aaPredicted RBP14.25□□□□□ -0.13
VMP1-201ENST00000262291 CA12O43570 354 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 GAS8O95995 478 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 DRG2P55039 364 aaKnown RBP14.25□□□□□ -0.13
VMP1-201ENST00000262291 CACNB2Q08289 660 aaPredicted RBP14.25□□□□□ -0.13
VMP1-201ENST00000262291 ZNF268Q14587 947 aaPredicted RBP14.25□□□□□ -0.13
VMP1-201ENST00000262291 MCRS1Q96EZ8 462 aa14.25□□□□□ -0.13
VMP1-201ENST00000262291 C3orf70A6NLC5 250 aaPredicted RBP14.24□□□□□ -0.13
VMP1-201ENST00000262291 FOXO6A8MYZ6 492 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 PTGESO14684 152 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 LIASO43766 372 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 CST8O60676 142 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 CAND2O75155 1236 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 CHRNA1P02708 482 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 GNL1P36915 607 aaPredicted RBP14.24□□□□□ -0.13
VMP1-201ENST00000262291 MLH1P40692 756 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 ATXN1P54253 815 aaKnown RBP14.24□□□□□ -0.13
VMP1-201ENST00000262291 FCGRTP55899 365 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 SREBF2Q12772 1141 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 MTMR3Q13615 1198 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 CCNG2Q16589 344 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 TFDP3Q5H9I0 405 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 DENND2CQ68D51 928 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 KCTD6Q8NC69 237 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 EPS8L3Q8TE67 593 aaKnown RBP14.24□□□□□ -0.13
VMP1-201ENST00000262291 GAD1Q99259 594 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 MTG1Q9BT17 334 aaPredicted RBP14.24□□□□□ -0.13
VMP1-201ENST00000262291 NGRNQ9NPE2 291 aaKnown RBP14.24□□□□□ -0.13
VMP1-201ENST00000262291 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.24□□□□□ -0.13
VMP1-201ENST00000262291 TJP3O95049 919 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 IGHA2P01877 340 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 NR1D1P20393 614 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 MRPS6P82932 125 aaKnown RBP14.24□□□□□ -0.13
VMP1-201ENST00000262291 CDC42EP1Q00587 391 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 TAP1Q03518 808 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 PTK6Q13882 451 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 PAN2Q504Q3 1202 aaKnown RBP14.24□□□□□ -0.13
VMP1-201ENST00000262291 MFSD14CQ5VZR4 134 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 NPNTQ6UXI9 565 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 OSTM1Q86WC4 334 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 NT5DC4Q86YG4 428 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 CCDC33Q8N5R6 958 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 MAIP1Q8WWC4 291 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 SNF8Q96H20 258 aa14.24□□□□□ -0.13
VMP1-201ENST00000262291 PABPC3Q9H361 631 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms