RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ZBED6P86452 979 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 SMARCB1Q12824 385 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 NFE2Q16621 373 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 MDH1BQ5I0G3 518 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 PPM1LQ5SGD2 360 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 GJB7Q6PEY0 223 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 RRAGAQ7L523 313 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 ENOSF1Q7L5Y1 443 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 CCDC186Q7Z3E2 898 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 CACNA2D4Q7Z3S7 1137 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 ACOT1Q86TX2 421 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 CRYBG2Q8N1P7 616 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 PPM1KQ8N3J5 372 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 CCDC112Q8NEF3 446 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 SPPL2BQ8TCT7 592 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 C2orf15Q8WU43 125 aaKnown RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 PCED1BQ96HM7 432 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 KREMEN1Q96MU8 473 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 RHOBTB2Q9BYZ6 727 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 PRKD2Q9BZL6 878 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 ADAM7Q9H2U9 754 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 EPHX3Q9H6B9 360 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 ZNHIT6Q9NWK9 470 aaKnown RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 CEP72Q9P209 647 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 AJAP1Q9UKB5 411 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-201ENST00000261813 PCDHB5Q9Y5E4 795 aa12.3□□□□□ -0.44
PFDN1-201ENST00000261813 MTCL1Q9Y4B5 1905 aaKnown RBP12.29□□□□□ -0.44
PFDN1-201ENST00000261813 CCL16O15467 120 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 HNRNPA1P09651 372 aaKnown RBP eCLIP12.29□□□□□ -0.44
PFDN1-201ENST00000261813 CCDC172P0C7W6 258 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 HAPLN1P10915 354 aaPredicted RBP12.29□□□□□ -0.44
PFDN1-201ENST00000261813 USP46P62068 366 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 GCNT1Q02742 428 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 ITIH3Q06033 890 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 TWF1Q12792 350 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 SMAD4Q13485 552 aaKnown RBP12.29□□□□□ -0.44
PFDN1-201ENST00000261813 CFAP221Q4G0U5 840 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 ZNF394Q53GI3 561 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 RTL10Q7L3V2 364 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 GPR149Q86SP6 731 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 SPATA2LQ8IUW3 424 aaPredicted RBP12.29□□□□□ -0.44
PFDN1-201ENST00000261813 OR8K1Q8NGG5 319 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 SUSD6Q92537 303 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 TNIP3Q96KP6 325 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 PANX2Q96RD6 677 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 SEPT5Q99719 369 aaPredicted RBP12.29□□□□□ -0.44
PFDN1-201ENST00000261813 LSM14BQ9BX40 385 aaKnown RBP12.29□□□□□ -0.44
PFDN1-201ENST00000261813 NT5C1AQ9BXI3 368 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 NAA15Q9BXJ9 866 aaKnown RBP12.29□□□□□ -0.44
PFDN1-201ENST00000261813 B3GNT5Q9BYG0 378 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 FAM124BQ9H5Z6 455 aaPredicted RBP12.29□□□□□ -0.44
PFDN1-201ENST00000261813 HSFX1Q9UBD0 423 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 APEX2Q9UBZ4 518 aa12.29□□□□□ -0.44
PFDN1-201ENST00000261813 USP15Q9Y4E8 981 aaPredicted RBP12.29□□□□□ -0.44
PFDN1-201ENST00000261813 CLDN5O00501 218 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 GPR37L1O60883 481 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 LRG1P02750 347 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 POU2F2P09086 479 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 IL9P15248 144 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 ATF6P18850 670 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 CYP2F1P24903 491 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 GPR15P49685 360 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 KLK7P49862 253 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 CACNA2D1P54289 1103 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 RAD23BP54727 409 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 CYP27A1Q02318 531 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 MAPRE1Q15691 268 aaKnown RBP12.28□□□□□ -0.44
PFDN1-201ENST00000261813 MGAT5BQ3V5L5 792 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 KLHDC7AQ5VTJ3 777 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 PTCRAQ6ISU1 281 aaPredicted RBP12.28□□□□□ -0.44
PFDN1-201ENST00000261813 C4orf50Q6ZRC1 276 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 PAQR9Q6ZVX9 377 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 TTC39CQ8N584 583 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 C12orf29Q8N999 325 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 SLC4A11Q8NBS3 891 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 SMG7Q92540 1137 aaKnown RBP12.28□□□□□ -0.44
PFDN1-201ENST00000261813 SYN2Q92777 582 aaPredicted RBP12.28□□□□□ -0.44
PFDN1-201ENST00000261813 JAKMIP2Q96AA8 810 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 THAP11Q96EK4 314 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 FUBP3Q96I24 572 aaKnown RBP eCLIP12.28□□□□□ -0.44
PFDN1-201ENST00000261813 ZNF518BQ9C0D4 1074 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 ABCB6Q9NP58 842 aa12.28□□□□□ -0.44
PFDN1-201ENST00000261813 UBE2TQ9NPD8 197 aaPredicted RBP12.28□□□□□ -0.44
PFDN1-201ENST00000261813 FAM207AQ9NSI2 230 aaPredicted RBP12.28□□□□□ -0.44
PFDN1-201ENST00000261813 TCF20Q9UGU0 1960 aaKnown RBP12.27□□□□□ -0.44
PFDN1-201ENST00000261813 RNF225M0QZC1 329 aaPredicted RBP12.27□□□□□ -0.45
PFDN1-201ENST00000261813 MFAP3LO75121 409 aa12.27□□□□□ -0.45
PFDN1-201ENST00000261813 ADH1BP00325 375 aa12.27□□□□□ -0.45
PFDN1-201ENST00000261813 GYPCP04921 128 aa12.27□□□□□ -0.45
PFDN1-201ENST00000261813 CCDC130P13994 396 aa12.27□□□□□ -0.45
PFDN1-201ENST00000261813 UCHL3P15374 230 aa12.27□□□□□ -0.45
PFDN1-201ENST00000261813 BDNFP23560 247 aa12.27□□□□□ -0.45
PFDN1-201ENST00000261813 CASP14P31944 242 aa12.27□□□□□ -0.45
PFDN1-201ENST00000261813 KRT9P35527 623 aa12.27□□□□□ -0.45
PFDN1-201ENST00000261813 TUFMP49411 452 aaKnown RBP12.27□□□□□ -0.45
PFDN1-201ENST00000261813 MFAP3P55082 362 aa12.27□□□□□ -0.45
PFDN1-201ENST00000261813 YWHAEP62258 255 aaKnown RBP12.27□□□□□ -0.45
PFDN1-201ENST00000261813 NTHL1P78549 312 aa12.27□□□□□ -0.45
PFDN1-201ENST00000261813 SMAD2Q15796 467 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms