RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 PMF1Q6P1K2 205 aa16.7■□□□□ 0.26
CCDC90B-201ENST00000260054 PIGZQ86VD9 579 aa16.7■□□□□ 0.26
CCDC90B-201ENST00000260054 FAM161BQ96MY7 647 aa16.7■□□□□ 0.26
CCDC90B-201ENST00000260054 HSFX1Q9UBD0 423 aa16.7■□□□□ 0.26
CCDC90B-201ENST00000260054 FBXW11Q9UKB1 542 aa16.7■□□□□ 0.26
CCDC90B-201ENST00000260054 TMCO5BA8MYB1 307 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 HHLA1C9JL84 531 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 NDUFA10O95299 355 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 ATF6P18850 670 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 NRIP1P48552 1158 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 RGS7P49802 495 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 SLC8A3P57103 927 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 PDCLQ13371 301 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 ADGRE1Q14246 886 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 DUSP6Q16828 381 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 ALKBH5Q6P6C2 394 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 TCEAL8Q8IYN2 117 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 SLC22A17Q8WUG5 538 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 C8orf48Q96LL4 319 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 CPXM1Q96SM3 734 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 TLE6Q9H808 572 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 TJP2Q9UDY2 1190 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 MAFFQ9ULX9 164 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 YIPF1Q9Y548 306 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 EPN1Q9Y6I3 576 aaPredicted RBP16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 MYH10P35580 1976 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 PRRG1O14668 218 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 TRIM66O15016 1216 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 ARHGAP6O43182 974 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 GABBR2O75899 941 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 GZMAP12544 262 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 EPCAMP16422 314 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 ELF1P32519 619 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 GTF2F1P35269 517 aaKnown RBP eCLIP16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 CYLC1P35663 651 aaPredicted RBP16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 PTPN20Q4JDL3 420 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 CCDC122Q5T0U0 273 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 ACAD10Q6JQN1 1059 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 GPRIN1Q7Z2K8 1008 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 KREMEN2Q8NCW0 462 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 STKLD1Q8NE28 680 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 STK32AQ8WU08 396 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 INSL5Q9Y5Q6 135 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 HCFC2Q9Y5Z7 792 aa16.69■□□□□ 0.26
CCDC90B-201ENST00000260054 EIF3CLB5ME19 914 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 LCA5LO95447 670 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 C1RP00736 705 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 NSFP46459 744 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 TUFMP49411 452 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 RBM10P98175 930 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 C2CD6Q53TS8 623 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 TCEAL5Q5H9L2 206 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 HABP4Q5JVS0 413 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 SLC7A14Q8TBB6 771 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 GPR152Q8TDT2 470 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 PPP1R13BQ96KQ4 1090 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 EIF3CQ99613 913 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 SLC4A5Q9BY07 1137 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 UBXN6Q9BZV1 441 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 ISCUQ9H1K1 167 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 NSUN3Q9H649 340 aaKnown RBP16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 PNPLA8Q9NP80 782 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 ST7Q9NRC1 585 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 LMCD1Q9NZU5 365 aa16.68■□□□□ 0.26
CCDC90B-201ENST00000260054 PIK3R2O00459 728 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 TNFRSF10BO14763 440 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 NRDCO43847 1150 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 RTN2O75298 545 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 C8AP07357 584 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 MMP8P22894 467 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 RPL34P49207 117 aaKnown RBP16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 RPL10AP62906 217 aaKnown RBP16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 PTP4A2Q12974 167 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 MMS22LQ6ZRQ5 1243 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 TOGARAM2Q6ZUX3 1019 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 MON1BQ7L1V2 547 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 PHF13Q86YI8 300 aaPredicted RBP16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 ACRBPQ8NEB7 543 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 KCTD13Q8WZ19 329 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 HSFY1Q96LI6 401 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 NOX5Q96PH1 765 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 DESI2Q9BSY9 194 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 MAN1C1Q9NR34 630 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 REXO2Q9Y3B8 237 aaKnown RBP16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 MTCH2Q9Y6C9 303 aa16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 PRRC2BQ5JSZ5 2229 aaKnown RBP16.67■□□□□ 0.26
CCDC90B-201ENST00000260054 E5RJQ4 531 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 FTLP02792 175 aaPredicted RBP16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 ERBB2P04626 1255 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 SLC5A3P53794 718 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 TWF1Q12792 350 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 HYAL1Q12794 435 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 KCNC3Q14003 757 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 RAB41Q5JT25 222 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 LIN9Q5TKA1 542 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 LLGL2Q6P1M3 1020 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 CCDC149Q6ZUS6 474 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 TMEM110Q86TL2 294 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 ERICH1Q86X53 443 aa16.66■□□□□ 0.26
CCDC90B-201ENST00000260054 VN1R2Q8NFZ6 395 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms