RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 A0A1B0GUA9 196 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 F2P00734 622 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 KDELR1P24390 212 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 MIPP30301 263 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 CPT1AP50416 773 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 TRNP1Q6NT89 227 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 CAPN12Q6ZSI9 719 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 LRRC34Q8IZ02 419 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 SLC35B2Q8TB61 432 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 PPM1EQ8WY54 764 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 NKD2Q969F2 451 aaPredicted RBP19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 ATXN2Q99700 1313 aaKnown RBP19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 TMEM120BA0PK00 339 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 GOLGA8MH3BSY2 632 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 BANF1O75531 89 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 GRAP2O75791 330 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 MYL3P08590 195 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 AKR1A1P14550 325 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 GAD2Q05329 585 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 ZNF268Q14587 947 aaPredicted RBP19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 SPRED3Q2MJR0 410 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 FNIP1Q8TF40 1166 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 MCRS1Q96EZ8 462 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 PEBP4Q96S96 227 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 ADPGKQ9BRR6 497 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 CYP3A43Q9HB55 503 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 TPX2Q9ULW0 747 aaKnown RBP19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 BARX2Q9UMQ3 279 aaPredicted RBP19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 DRG1Q9Y295 367 aaKnown RBP19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 HES2Q9Y543 173 aa19.63■□□□□ 0.73
PDLIM4-201ENST00000253754 NPTXRO95502 500 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 ITGAVP06756 1048 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 KRT7P08729 469 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 VDRP11473 427 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 P4HA1P13674 534 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 MPP2Q14168 576 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 RNASEH2BQ5TBB1 312 aaKnown RBP19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 GKAP1Q5VSY0 366 aaPredicted RBP19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 PACS2Q86VP3 889 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 ANKRD42Q8N9B4 389 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 CDHR5Q9HBB8 845 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 TSPAN16Q9UKR8 245 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 ITGA11Q9UKX5 1188 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 NAALADL1Q9UQQ1 740 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 E5RJQ4 531 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 SMIM10L2AP0DMW4 78 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 SMIM10L2BP0DMW5 78 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 GABRB2P47870 512 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 NRLP54845 237 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 RBP5P82980 135 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 SP3Q02447 781 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 MYO1EQ12965 1108 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 HADHQ16836 314 aaKnown RBP19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 MFSD14CQ5VZR4 134 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 RELL1Q8IUW5 271 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 CACNA2D3Q8IZS8 1091 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 KCTD6Q8NC69 237 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 CCHCR1Q8TD31 782 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 CABS1Q96KC9 395 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 ZMAT2Q96NC0 199 aaKnown RBP19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 SNTG2Q9NY99 539 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 WDR35Q9P2L0 1181 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 Q9Y3F1 56 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 C2CD2Q9Y426 696 aa19.62■□□□□ 0.73
PDLIM4-201ENST00000253754 HMGCRP04035 888 aa19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 PFKMP08237 780 aa19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 RGS7P49802 495 aa19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 GSCP56915 257 aaPredicted RBP19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 INCA1Q0VD86 236 aa19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 MTM1Q13496 603 aa19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 MFSD10Q14728 455 aa19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 FSCN1Q16658 493 aaKnown RBP19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 C15orf59Q2T9L4 293 aaPredicted RBP19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 FAM183BPQ6ZVS7 135 aa19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 EIF2AQ9BY44 585 aaKnown RBP19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 KCNK9Q9NPC2 374 aa19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 TRIP12Q14669 1992 aaPredicted RBP19.61■□□□□ 0.73
PDLIM4-201ENST00000253754 RRN3P2A6NIE6 340 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 C6orf222P0C671 652 aaPredicted RBP19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 HOXA11P31270 313 aaPredicted RBP19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 TRIM32Q13049 653 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 MMRN1Q13201 1228 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 GLRA4Q5JXX5 417 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 YTHDF3Q7Z739 585 aaKnown RBP19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 SRRM1Q8IYB3 904 aaKnown RBP19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 FAXDC2Q96IV6 333 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 LPIN3Q9BQK8 851 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 MRPL45Q9BRJ2 306 aaKnown RBP19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 CALN1Q9BXU9 219 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 PCDH9Q9HC56 1237 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 TUBGCP4Q9UGJ1 667 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 GGA2Q9UJY4 613 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 USP18Q9UMW8 372 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 TCEA3O75764 348 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 TRUB2O95900 331 aaKnown RBP19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 VIMP08670 466 aaKnown RBP19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 CYBAP13498 195 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 CDO1Q16878 200 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 ANKRD22Q5VYY1 191 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 OR6B2Q6IFH4 312 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms