RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 HADHQ16836 314 aaKnown RBP12.51□□□□□ -0.41
USHBP1-201ENST00000252597 SH3PXD2AQ5TCZ1 1133 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 KATNAL2Q8IYT4 538 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 CEP120Q8N960 986 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 ASAP3Q8TDY4 903 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 RANBP17Q9H2T7 1088 aaKnown RBP12.51□□□□□ -0.41
USHBP1-201ENST00000252597 SEPT10Q9P0V9 454 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 SLC17A6Q9P2U8 582 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 LGALS13Q9UHV8 139 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 FEM1BQ9UK73 627 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 CLUHO75153 1309 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 TTLL13PA6NNM8 815 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 ALADP13716 330 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 SP100P23497 879 aaPredicted RBP12.51□□□□□ -0.41
USHBP1-201ENST00000252597 ABCG1P45844 678 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 GCNT1Q02742 428 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 KLF1Q13351 362 aaPredicted RBP12.51□□□□□ -0.41
USHBP1-201ENST00000252597 OR6B2Q6IFH4 312 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 FAM160B2Q86V87 743 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 NDUFAF2Q8N183 169 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 CPT1BQ92523 772 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 MOV10L1Q9BXT6 1211 aaKnown RBP12.51□□□□□ -0.41
USHBP1-201ENST00000252597 CISHQ9NSE2 258 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 DNAH12Q6ZR08 3092 aa12.51□□□□□ -0.41
USHBP1-201ENST00000252597 IQANK1A0A1B0GTG1 560 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 E5RJQ4 531 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 PSMG1O95456 288 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 ICAM1P05362 532 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 MORF4L2Q15014 288 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 NFIL3Q16649 462 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 RAB6CQ53S08 254 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 PPP1R15BQ5SWA1 713 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 FAM102AQ5T9C2 384 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 PPIL6Q8IXY8 311 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 SHKBP1Q8TBC3 707 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 MTBPQ96DY7 904 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 RAB6CQ9H0N0 254 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 RPAP3Q9H6T3 665 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 RABGEF1Q9UJ41 708 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 EXTL3O43909 919 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 LYPLA1O75608 230 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 ZWINTO95229 277 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 MAPTP10636 758 aaKnown RBP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 KRT76Q01546 638 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 ZNF699Q32M78 642 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 RNASEH2BQ5TBB1 312 aaKnown RBP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 DENND1BQ6P3S1 775 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 RNF148Q8N7C7 305 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 MIS12Q9H081 205 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 CYP26B1Q9NR63 512 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 CFLARO15519 480 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 VNN1O95497 513 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 KCNA4P22459 653 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 EMC2Q15006 297 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 C15orf59Q2T9L4 293 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 KLHL38Q2WGJ6 581 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 ZACNQ401N2 412 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 SLC45A4Q5BKX6 768 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 TCHHL1Q5QJ38 904 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 CDHR3Q6ZTQ4 885 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 C4orf19Q8IY42 314 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 NRG4Q8WWG1 115 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 TFAP2BQ92481 460 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 SRPK1Q96SB4 655 aaKnown RBP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 IFT122Q9HBG6 1241 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 JPH1Q9HDC5 661 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 AVENQ9NQS1 362 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 NDE1Q9NXR1 346 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 ZC3H7BQ9UGR2 993 aaKnown RBP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 MRPL42Q9Y6G3 142 aaKnown RBP12.5□□□□□ -0.41
USHBP1-201ENST00000252597 AK5Q9Y6K8 562 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 SLC4A7Q9Y6M7 1214 aa12.5□□□□□ -0.41
USHBP1-201ENST00000252597 hCG_1818297A0A087WSY0 165 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 TCRBV9S1A1TA0A576 114 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 SPECC1L-ADORA2AF8WAN1 911 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 ALOX15BO15296 676 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 ASNSP08243 561 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 IL1R2P27930 398 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 RANBP1P43487 201 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 JAK3P52333 1124 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 NCKAP1LP55160 1127 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 ACTR2P61160 394 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 BTKQ06187 659 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 SLC34A1Q06495 639 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 BST1Q10588 318 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 MYBPC2Q14324 1141 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 CES3Q6UWW8 571 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 RASSF3Q86WH2 238 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 GSTCDQ8NEC7 633 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 OXNAD1Q96HP4 312 aaPredicted RBP12.49□□□□□ -0.41
USHBP1-201ENST00000252597 IRAK4Q9NWZ3 460 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 HERC5Q9UII4 1024 aaKnown RBP12.49□□□□□ -0.41
USHBP1-201ENST00000252597 KCNG1Q9UIX4 513 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 GJA3Q9Y6H8 435 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 C2CD2LO14523 706 aa12.49□□□□□ -0.41
USHBP1-201ENST00000252597 SESN2P58004 480 aaPredicted RBP12.49□□□□□ -0.41
USHBP1-201ENST00000252597 RPL10AP62906 217 aaKnown RBP12.49□□□□□ -0.41
USHBP1-201ENST00000252597 PARP6Q2NL67 630 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms