RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 ECHDC2Q86YB7 292 aa9.66□□□□□ -0.86
COL21A1-201ENST00000244728 FBXO36Q8NEA4 188 aa9.66□□□□□ -0.86
COL21A1-201ENST00000244728 TCP10LQ8TDR4 215 aa9.66□□□□□ -0.86
COL21A1-201ENST00000244728 ZNF317Q96PQ6 595 aaPredicted RBP9.66□□□□□ -0.86
COL21A1-201ENST00000244728 NT5C1AQ9BXI3 368 aa9.66□□□□□ -0.86
COL21A1-201ENST00000244728 PCMTD2Q9NV79 361 aa9.66□□□□□ -0.86
COL21A1-201ENST00000244728 ARMCX1Q9P291 453 aa9.66□□□□□ -0.86
COL21A1-201ENST00000244728 PRG3Q9Y2Y8 225 aaPredicted RBP9.66□□□□□ -0.86
COL21A1-201ENST00000244728 LOC100653049A0A140TA62 436 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 TRIM49D1C9J1S8 452 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 E7ENQ6 273 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 MAGEB2O15479 319 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 PPP1R11O60927 126 aaPredicted RBP9.65□□□□□ -0.86
COL21A1-201ENST00000244728 PIAS1O75925 651 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 KRT34O76011 436 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 VIL1P09327 827 aaKnown RBP9.65□□□□□ -0.86
COL21A1-201ENST00000244728 ZSCAN5DPP0CG00 497 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 CPB1P15086 417 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 BGNP21810 368 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 SSTR1P30872 391 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 CDH8P55286 799 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 DEUP1Q05D60 604 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 STX3Q13277 289 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 RASA2Q15283 850 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 SLC35G1Q2M3R5 365 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 GJC2Q5T442 439 aaPredicted RBP9.65□□□□□ -0.86
COL21A1-201ENST00000244728 IRGCQ6NXR0 463 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 C4orf19Q8IY42 314 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 E2F7Q96AV8 911 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 BTBD10Q9BSF8 475 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 WDR18Q9BV38 432 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 PRMT7Q9NVM4 692 aaPredicted RBP9.65□□□□□ -0.86
COL21A1-201ENST00000244728 AJAP1Q9UKB5 411 aaPredicted RBP9.65□□□□□ -0.86
COL21A1-201ENST00000244728 STARD13Q9Y3M8 1113 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 MRPL42Q9Y6G3 142 aaKnown RBP9.65□□□□□ -0.86
COL21A1-201ENST00000244728 CNTRLQ7Z7A1 2325 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 PSTPIP1O43586 416 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 CXCL8P10145 99 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 ITGB5P18084 799 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 PPATQ06203 517 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 FOXD4Q12950 439 aaPredicted RBP9.65□□□□□ -0.86
COL21A1-201ENST00000244728 CHI3L2Q15782 390 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 CRY2Q49AN0 593 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 EFHC2Q5JST6 749 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 PPIL6Q8IXY8 311 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 KCTD17Q8N5Z5 321 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 FAM13CQ8NE31 585 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 APPL2Q8NEU8 664 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 OPTNQ96CV9 577 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 TNIP3Q96KP6 325 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 FSD1LQ9BXM9 530 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 LRRC19Q9H756 370 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 SUDS3Q9H7L9 328 aaPredicted RBP9.65□□□□□ -0.86
COL21A1-201ENST00000244728 GRHL1Q9NZI5 618 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 ZC3H7BQ9UGR2 993 aaKnown RBP9.65□□□□□ -0.86
COL21A1-201ENST00000244728 CRYBG1Q9Y4K1 1723 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 MYH15Q9Y2K3 1946 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 ATP6V1C1P21283 382 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 YY1P25490 414 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 DSG3P32926 999 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 AP3M2P53677 418 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 TGFB2P61812 414 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 CLEC16AQ2KHT3 1053 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 MFSD14CQ5VZR4 134 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 MFSD5Q6N075 450 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 SCUBE1Q8IWY4 988 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 SLC25A41Q8N5S1 370 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 FAM71DQ8N9W8 422 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 SPOCK2Q92563 424 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 ZBED2Q9BTP6 218 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 EPS15L1Q9UBC2 864 aa9.65□□□□□ -0.86
COL21A1-201ENST00000244728 MAP1BP46821 2468 aaKnown RBP9.65□□□□□ -0.87
COL21A1-201ENST00000244728 KRT36O76013 467 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 SPATA31C1P0DKV0 1188 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 INSRRP14616 1297 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 EPHX2P34913 555 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 HABP4Q5JVS0 413 aaKnown RBP9.65□□□□□ -0.87
COL21A1-201ENST00000244728 XRRA1Q6P2D8 792 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 ZDHHC24Q6UX98 284 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 MCOLN2Q8IZK6 566 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 COPS5Q92905 334 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 DTNBP1Q96EV8 351 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 OSMRQ99650 979 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 ZDHHC18Q9NUE0 388 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 SETD4Q9NVD3 440 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 GPATCH2LQ9NWQ4 482 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 BFARQ9NZS9 450 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 SLC24A2Q9UI40 661 aa9.65□□□□□ -0.87
COL21A1-201ENST00000244728 SDK1Q7Z5N4 2213 aa9.64□□□□□ -0.87
COL21A1-201ENST00000244728 ARFGEF2Q9Y6D5 1785 aa9.64□□□□□ -0.87
COL21A1-201ENST00000244728 DFFAO00273 331 aa9.64□□□□□ -0.87
COL21A1-201ENST00000244728 DNALI1O14645 258 aaPredicted RBP9.64□□□□□ -0.87
COL21A1-201ENST00000244728 TAC1P20366 129 aa9.64□□□□□ -0.87
COL21A1-201ENST00000244728 XPAP23025 273 aaPredicted RBP9.64□□□□□ -0.87
COL21A1-201ENST00000244728 BLMHQ13867 455 aa9.64□□□□□ -0.87
COL21A1-201ENST00000244728 MORF4L2Q15014 288 aa9.64□□□□□ -0.87
COL21A1-201ENST00000244728 ANKRD20A4Q4UJ75 823 aa9.64□□□□□ -0.87
COL21A1-201ENST00000244728 BTBD8Q5XKL5 378 aa9.64□□□□□ -0.87
COL21A1-201ENST00000244728 OLFML2BQ68BL8 750 aa9.64□□□□□ -0.87
COL21A1-201ENST00000244728 PGBD4Q96DM1 585 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms