RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 MAP9Q49MG5 647 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 TEX35Q5T0J7 233 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 EP400NLQ6ZTU2 488 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 GJD3Q8N144 294 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 EFHBQ8N7U6 833 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 EIF1ADQ8N9N8 165 aaKnown RBP13.93□□□□□ -0.18
SLIRP-201ENST00000238688 VN1R2Q8NFZ6 395 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 HNRNPLLQ8WVV9 542 aaKnown RBP13.93□□□□□ -0.18
SLIRP-201ENST00000238688 CD101Q93033 1021 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 FAM84AQ96KN4 292 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 ZSWIM1Q9BR11 485 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 RSAD1Q9HA92 442 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 ACP6Q9NPH0 428 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 KANSL3Q9P2N6 904 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 TUBGCP4Q9UGJ1 667 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 ANAPC7Q9UJX3 599 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 DSEQ9UL01 958 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 POLIQ9UNA4 740 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 HES2Q9Y543 173 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 PCDHB12Q9Y5F1 795 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 PCDHA3Q9Y5H8 950 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 SNX9Q9Y5X1 595 aa13.93□□□□□ -0.18
SLIRP-201ENST00000238688 MYO10Q9HD67 2058 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 PI4K2BG5E9Z4 385 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 PTGESO14684 152 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 SPOPO43791 374 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 PROSCO94903 275 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 LAG3P18627 525 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 RRM1P23921 792 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 AKAP5P24588 427 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 BRD2P25440 801 aaKnown RBP13.92□□□□□ -0.18
SLIRP-201ENST00000238688 CETN2P41208 172 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 NRIP1P48552 1158 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 LHX1P48742 406 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 NDST1P52848 882 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 LILRA4P59901 499 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 RBM10P98175 930 aaKnown RBP13.92□□□□□ -0.18
SLIRP-201ENST00000238688 PLCB3Q01970 1234 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 ZP2Q05996 745 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 MAMLD1Q13495 774 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 KCNC3Q14003 757 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 SMAD2Q15796 467 aaKnown RBP13.92□□□□□ -0.18
SLIRP-201ENST00000238688 SPOUT1Q5T280 376 aaKnown RBP13.92□□□□□ -0.18
SLIRP-201ENST00000238688 DNAJC24Q6P3W2 148 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 KCNT2Q6UVM3 1135 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 ARCQ7LC44 396 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 C1orf131Q8NDD1 294 aaKnown RBP13.92□□□□□ -0.18
SLIRP-201ENST00000238688 FEZF2Q8TBJ5 459 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 COG1Q8WTW3 980 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 CPA5Q8WXQ8 436 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 C18orf8Q96DM3 657 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 HEXIM2Q96MH2 286 aaKnown RBP13.92□□□□□ -0.18
SLIRP-201ENST00000238688 ELOVL4Q9GZR5 314 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 SDCBP2Q9H190 292 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 SLITRK6Q9H5Y7 841 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 AAASQ9NRG9 546 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.92□□□□□ -0.18
SLIRP-201ENST00000238688 HESX1Q9UBX0 185 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 TMEM59LQ9UK28 342 aa13.92□□□□□ -0.18
SLIRP-201ENST00000238688 TECTAO75443 2155 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 ARL5CA6NH57 179 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 SIGLEC16A6NMB1 481 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 PER2O15055 1255 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 DDX3YO15523 660 aaKnown RBP13.91□□□□□ -0.18
SLIRP-201ENST00000238688 HOXA2O43364 376 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 COL9A1P20849 921 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 TNFRSF8P28908 595 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 ACADSBP45954 432 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 AARSP49588 968 aaKnown RBP eCLIP13.91□□□□□ -0.18
SLIRP-201ENST00000238688 RWDD2BP57060 319 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 SLC8A3P57103 927 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 SEL1L2Q5TEA6 688 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 MMS22LQ6ZRQ5 1243 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 RBM23Q86U06 439 aaKnown RBP13.91□□□□□ -0.18
SLIRP-201ENST00000238688 LRRC43Q8N309 656 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 RNF169Q8NCN4 708 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 TFAP2BQ92481 460 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 LPPQ93052 612 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 C18orf25Q96B23 403 aaPredicted RBP13.91□□□□□ -0.18
SLIRP-201ENST00000238688 PKNOX2Q96KN3 472 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 CAPZA3Q96KX2 299 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 C11orf70Q9BRQ4 267 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 APOL6Q9BWW8 343 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 SNX25Q9H3E2 840 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 TLR9Q9NR96 1032 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 HOMER3Q9NSC5 361 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 LZTS1Q9Y250 596 aa13.91□□□□□ -0.18
SLIRP-201ENST00000238688 TCRBV5S1A1TA0A578 114 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 CARNS1A5YM72 827 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 TMEM191CA6NGB0 347 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 B4GALT3O60512 393 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 SRGAP2O75044 1071 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 ERBB2P04626 1255 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 COMTP21964 271 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 GNL1P36915 607 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-201ENST00000238688 GPD2P43304 727 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 BCAT1P54687 386 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 TUSC3Q13454 348 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 MESDQ14696 234 aa13.9□□□□□ -0.18
SLIRP-201ENST00000238688 DUSP6Q16828 381 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms