RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ZC3H12AQ5D1E8 599 aaKnown RBP12.98□□□□□ -0.33
NUP88-201ENST00000225696 IRGCQ6NXR0 463 aa12.98□□□□□ -0.33
NUP88-201ENST00000225696 NPNTQ6UXI9 565 aa12.98□□□□□ -0.33
NUP88-201ENST00000225696 UBR7Q8N806 425 aa12.98□□□□□ -0.33
NUP88-201ENST00000225696 LRRN4Q8WUT4 740 aa12.98□□□□□ -0.33
NUP88-201ENST00000225696 SH3GL3Q99963 347 aa12.98□□□□□ -0.33
NUP88-201ENST00000225696 ZCWPW1Q9H0M4 648 aa12.98□□□□□ -0.33
NUP88-201ENST00000225696 RAB6CQ9H0N0 254 aa12.98□□□□□ -0.33
NUP88-201ENST00000225696 C17orf75Q9HAS0 396 aa12.98□□□□□ -0.33
NUP88-201ENST00000225696 PCSK1NQ9UHG2 260 aa12.98□□□□□ -0.33
NUP88-201ENST00000225696 LRCH1Q9Y2L9 728 aa12.98□□□□□ -0.33
NUP88-201ENST00000225696 KBTBD13C9JR72 458 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 AHCYL1O43865 530 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 DGAT1O75907 488 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 LMNAP02545 664 aaKnown RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 KCNA2P16389 499 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 PHBP35232 272 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 PTPN7P35236 360 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 GCLCP48506 637 aaPredicted RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 POTEAQ6S8J7 498 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 SCARA5Q6ZMJ2 495 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 TRIM56Q9BRZ2 755 aaKnown RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 MSTO1Q9BUK6 570 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 C20orf27Q9GZN8 174 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 SYNCQ9H7C4 482 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 STX18Q9P2W9 335 aaKnown RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 STYXL1Q9Y6J8 313 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 TNS1Q9HBL0 1735 aaKnown RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 CXorf49A8MYA2 514 aaPredicted RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 B2RBV5 119 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 H3BRJ5 948 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 APBA3O96018 575 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 ENO1P06733 434 aaKnown RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 UBTFL6P0CB48 400 aaPredicted RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 NEFHP12036 1026 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 PGM1P36871 562 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 SERPINB4P48594 390 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 MYL6P60660 151 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 SARNPP82979 210 aaKnown RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 ORC1Q13415 861 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 DLGAP5Q15398 846 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 KLHL38Q2WGJ6 581 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 PTPN20Q4JDL3 420 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 CIAPIN1Q6FI81 312 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.97□□□□□ -0.33
NUP88-201ENST00000225696 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 RBM15BQ8NDT2 890 aaKnown RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 RSAD2Q8WXG1 361 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 GATA6Q92908 595 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 MARCOQ9UEW3 520 aaPredicted RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 FETUBQ9UGM5 382 aa12.97□□□□□ -0.33
NUP88-201ENST00000225696 MTO1Q9Y2Z2 717 aaKnown RBP12.97□□□□□ -0.33
NUP88-201ENST00000225696 CCDC195A0A1B0GUA6 201 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 LRRIQ4A6NIV6 560 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 ABLIM1O14639 778 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 UGT1A9O60656 530 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 TOP3BO95985 862 aaKnown RBP12.96□□□□□ -0.33
NUP88-201ENST00000225696 C1QAP02745 245 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 NR3C2P08235 984 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 KITP10721 976 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 KCNA3P22001 575 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 KDELR1P24390 212 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 PSMA2P25787 234 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 MMRN1Q13201 1228 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 EMC2Q15006 297 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 DENND1BQ6P3S1 775 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 VSIG10LQ86VR7 867 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 SLC25A41Q8N5S1 370 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 MCPH1Q8NEM0 835 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 SLC44A1Q8WWI5 657 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 APOPT1Q96IL0 206 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 FAM161BQ96MY7 647 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 CGRRF1Q99675 332 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 MTMR12Q9C0I1 747 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 PPCSQ9HAB8 311 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 UGT1A7Q9HAW7 530 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 UGT1A10Q9HAW8 530 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 UGT1A8Q9HAW9 530 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 PLAC1Q9HBJ0 212 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 CISHQ9NSE2 258 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 STRIP2Q9ULQ0 834 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 KIAA1217Q5T5P2 1943 aa12.96□□□□□ -0.33
NUP88-201ENST00000225696 A0A0B4J269 797 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 A0A1B0GVG6 124 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 DCAF8L1A6NGE4 600 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 CAPN14A8MX76 684 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 HNRNPCL1O60812 293 aaKnown RBP12.96□□□□□ -0.34
NUP88-201ENST00000225696 USP1O94782 785 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 CALB1P05937 261 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 RAB27AP51159 221 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 CACNA2D1P54289 1103 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 SP2Q02086 613 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 SLC18A2Q05940 514 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 KDSRQ06136 332 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 AP1B1Q10567 949 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 MTMR2Q13614 643 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 DPYSL3Q14195 570 aa12.96□□□□□ -0.34
NUP88-201ENST00000225696 PIGHQ14442 188 aaPredicted RBP12.96□□□□□ -0.34
NUP88-201ENST00000225696 CWF19L1Q69YN2 538 aaKnown RBP12.96□□□□□ -0.34
NUP88-201ENST00000225696 BBS12Q6ZW61 710 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms