RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 SLC20A1Q8WUM9 679 aa11.97□□□□□ -0.49
NOD1-201ENST00000222823 MRPL1Q9BYD6 325 aaKnown RBP11.97□□□□□ -0.49
NOD1-201ENST00000222823 LOC100653049A0A140TA62 436 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 C17orf102A2RUQ5 167 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 RCCD1A6NED2 376 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 CCT8L1PA6NM43 557 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 EIF4E1BA6NMX2 242 aaKnown RBP11.96□□□□□ -0.49
NOD1-201ENST00000222823 FAM86B1E9PN63 330 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 KRT34O76011 436 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 PROSCO94903 275 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 FAM86B2P0C5J1 330 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 TM4SF1P30408 202 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 AKT1P31749 480 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 ST8SIA6P61647 398 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 ARID3BQ8IVW6 561 aaPredicted RBP11.96□□□□□ -0.49
NOD1-201ENST00000222823 HAS1Q92839 578 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 ABTB1Q969K4 478 aaPredicted RBP11.96□□□□□ -0.49
NOD1-201ENST00000222823 DNAJC19Q96DA6 116 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 THTPAQ9BU02 230 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 DUOX1Q9NRD9 1551 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 A0A0A6YYK5 440 aaPredicted RBP11.96□□□□□ -0.49
NOD1-201ENST00000222823 TGFB3P10600 412 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 FBXW10Q5XX13 1052 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 ARMC2Q8NEN0 867 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 CEP70Q8NHQ1 597 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 LZICQ8WZA0 190 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 TMA16Q96EY4 203 aaKnown RBP11.96□□□□□ -0.49
NOD1-201ENST00000222823 MANSC1Q9H8J5 431 aa11.96□□□□□ -0.49
NOD1-201ENST00000222823 GPBP1L1Q9HC44 474 aaPredicted RBP11.96□□□□□ -0.49
NOD1-201ENST00000222823 ADARB2Q9NS39 739 aaKnown RBP11.96□□□□□ -0.49
NOD1-201ENST00000222823 SLITRK3O94933 977 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 ASMTLO95671 621 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 VTNP04004 478 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 TAL1P17542 331 aaPredicted RBP11.96□□□□□ -0.5
NOD1-201ENST00000222823 HARS2P49590 506 aaKnown RBP11.96□□□□□ -0.5
NOD1-201ENST00000222823 OTUD4Q01804 1114 aaKnown RBP11.96□□□□□ -0.5
NOD1-201ENST00000222823 MCL1Q07820 350 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 OTOP1Q7RTM1 612 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 AENQ8WTP8 325 aaKnown RBP11.96□□□□□ -0.5
NOD1-201ENST00000222823 CEP19Q96LK0 163 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 CNPY3Q9BT09 278 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 IDI2Q9BXS1 227 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 SPATC1LQ9H0A9 340 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 MTIF3Q9H2K0 278 aaKnown RBP11.96□□□□□ -0.5
NOD1-201ENST00000222823 KDM4CQ9H3R0 1056 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 CDY2AQ9Y6F7 541 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 CDY1Q9Y6F8 540 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 MARF1Q9Y4F3 1742 aaKnown RBP11.96□□□□□ -0.5
NOD1-201ENST00000222823 A0A087WZ62 844 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 H3BRB1 525 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 PDE2AO00408 941 aaPredicted RBP11.96□□□□□ -0.5
NOD1-201ENST00000222823 ANXA9O76027 345 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 F9P00740 461 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 THPOP40225 353 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 SPDYAQ5MJ70 313 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 PLEKHH3Q7Z736 793 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 SLC35C1Q96A29 364 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 CMTM5Q96DZ9 223 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 FDXACB1Q9BRP7 624 aaPredicted RBP11.96□□□□□ -0.5
NOD1-201ENST00000222823 YIPF3Q9GZM5 350 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 TUT1Q9H6E5 874 aaKnown RBP11.96□□□□□ -0.5
NOD1-201ENST00000222823 STX18Q9P2W9 335 aaKnown RBP11.96□□□□□ -0.5
NOD1-201ENST00000222823 PCDHB8Q9UN66 801 aa11.96□□□□□ -0.5
NOD1-201ENST00000222823 SIPA1L3O60292 1781 aaPredicted RBP11.95□□□□□ -0.5
NOD1-201ENST00000222823 AIM2O14862 343 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 MAP4P27816 1152 aaKnown RBP11.95□□□□□ -0.5
NOD1-201ENST00000222823 ETFBP38117 255 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 RGS4P49798 205 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 SOX10P56693 466 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 PTPN11Q06124 597 aaPredicted RBP11.95□□□□□ -0.5
NOD1-201ENST00000222823 PTK6Q13882 451 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 APOBEC3HQ6NTF7 200 aaKnown RBP11.95□□□□□ -0.5
NOD1-201ENST00000222823 RNF180Q86T96 592 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 LONP2Q86WA8 852 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 WDR49Q8IV35 697 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 BAP1Q92560 729 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 MRGBPQ9NV56 204 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 SLC4A7Q9Y6M7 1214 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 TRIM66O15016 1216 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 EPHB6O15197 1021 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 CSDE1O75534 798 aaKnown RBP11.95□□□□□ -0.5
NOD1-201ENST00000222823 SLC2A3P11169 496 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 ODC1P11926 461 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 YY1P25490 414 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 FDFT1P37268 417 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 TGFB2P61812 414 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 PDK2Q15119 407 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 PGM5Q15124 567 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 PTRHD1Q6GMV3 140 aaKnown RBP11.95□□□□□ -0.5
NOD1-201ENST00000222823 LINC00523Q86TU6 105 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 DNAAF5Q86Y56 855 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 EMC1Q8N766 993 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 PCYOX1LQ8NBM8 494 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 DNERQ8NFT8 737 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 EXD1Q8NHP7 514 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 RPRD1AQ96P16 312 aaPredicted RBP11.95□□□□□ -0.5
NOD1-201ENST00000222823 FRMD8P1Q9BZ68 369 aaPredicted RBP11.95□□□□□ -0.5
NOD1-201ENST00000222823 KCNMB3Q9NPA1 279 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 SYNDIG1LA6NDD5 238 aa11.95□□□□□ -0.5
NOD1-201ENST00000222823 CES2O00748 559 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms