RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 FMO1Q01740 532 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 CDR2Q01850 454 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 BST2Q10589 180 aaKnown RBP20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 ARID5BQ14865 1188 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 SKIV2LQ15477 1246 aaKnown RBP20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 HGSNATQ68CP4 663 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 SYCE2Q6PIF2 218 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 ELMSAN1Q6PJG2 1045 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 CNGA4Q8IV77 575 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 TC2NQ8N9U0 490 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 OR8K1Q8NGG5 319 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 C8orf48Q96LL4 319 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 HAUS4Q9H6D7 363 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 SFXN1Q9H9B4 322 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 ZDHHC7Q9NXF8 308 aa20.58■□□□□ 0.88
SNAPC2-201ENST00000221573 NOTCH4Q99466 2003 aa20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 OBSL1O75147 1896 aa20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 CCDC195A0A1B0GUA6 201 aa20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 FAM170AA1A519 330 aa20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 HHLA1C9JL84 531 aa20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 HOXA9P31269 272 aa20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 KLHL30Q0D2K2 578 aa20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 RARS2Q5T160 578 aaKnown RBP20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 TMC5Q6UXY8 1006 aa20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 GPRIN1Q7Z2K8 1008 aa20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 ZNF677Q86XU0 584 aa20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 OLIG1Q8TAK6 271 aa20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 ZNF707Q96C28 371 aaPredicted RBP20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 SYT11Q9BT88 431 aa20.57■□□□□ 0.88
SNAPC2-201ENST00000221573 SPTBN5Q9NRC6 3674 aaKnown RBP20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 PLEKP08567 350 aaPredicted RBP20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 HNRNPH3P31942 346 aaKnown RBP20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 GPD2P43304 727 aa20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 PLD1Q13393 1074 aa20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 MTMR3Q13615 1198 aa20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 MEA1Q16626 185 aa20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 TDRD12Q587J7 1177 aaKnown RBP20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 WDR59Q6PJI9 974 aa20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 RTL10Q7L3V2 364 aa20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 ZNF571Q7Z3V5 609 aaPredicted RBP20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 PIGZQ86VD9 579 aa20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 AGPAT1Q99943 283 aa20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 PDCL3Q9H2J4 239 aa20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 CYTH4Q9UIA0 394 aa20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 CDH22Q9UJ99 828 aa20.56■□□□□ 0.88
SNAPC2-201ENST00000221573 SLC38A8A6NNN8 435 aa20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 XPO1O14980 1071 aaKnown RBP20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 HNRNPA1P09651 372 aaKnown RBP eCLIP20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 SETSIPP0DME0 302 aa20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 EPHB3P54753 998 aa20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 WDTC1Q8N5D0 677 aa20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 C1orf131Q8NDD1 294 aaKnown RBP20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 SLC35F5Q8WV83 523 aa20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 MSLNLQ96KJ4 702 aa20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 SPATA17Q96L03 361 aa20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 PRKD2Q9BZL6 878 aa20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 HCFC1R1Q9NWW0 138 aa20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 ARHGAP20Q9P2F6 1191 aa20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 IMPACTQ9P2X3 320 aa20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 DENND4CQ5VZ89 1909 aa20.55■□□□□ 0.88
SNAPC2-201ENST00000221573 PRUNE2Q8WUY3 3088 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 XIRP2A4UGR9 3374 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 TNFRSF10BO14763 440 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 SERPING1P05155 500 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 PLA2G4AP47712 749 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 RGS7P49802 495 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 SLC5A3P53794 718 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 SLC8A3P57103 927 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 USP46P62068 366 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 IFRD2Q12894 506 aaPredicted RBP20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 VEPH1Q14D04 833 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 CLUL1Q15846 466 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 PMF1Q6P1K2 205 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 CMASQ8NFW8 434 aaPredicted RBP20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 MAFAQ8NHW3 353 aaPredicted RBP20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 PSMG2Q969U7 264 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 PCDHB18PQ96TA0 734 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 LHX5Q9H2C1 402 aa20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 UBE2ZQ9H832 354 aaPredicted RBP20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 SEPT11Q9NVA2 429 aaKnown RBP20.54■□□□□ 0.88
SNAPC2-201ENST00000221573 PAPLNO95428 1278 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 HOXB8P17481 243 aaPredicted RBP20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 DENND5BQ6ZUT9 1274 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 ELMOD1Q8N336 334 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 SCAMP5Q8TAC9 235 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 SMG7Q92540 1137 aaKnown RBP20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 PNPLA8Q9NP80 782 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 MAGED2Q9UNF1 606 aaPredicted RBP20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 DENND4AQ7Z401 1863 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 ANAPC1Q9H1A4 1944 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 H3BQ06 376 aaPredicted RBP20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 PIK3R2O00459 728 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 XYLBO75191 536 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 GABBR2O75899 941 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 CSH1P0DML2 217 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 CSH2P0DML3 217 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 HMGA1P17096 107 aaKnown RBP20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 CDH5P33151 784 aaPredicted RBP20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 NOMO3P69849 1222 aa20.53■□□□□ 0.88
SNAPC2-201ENST00000221573 TSR1Q2NL82 804 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms