RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 C2orf40Q9H1Z8 148 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 CARD9Q9H257 536 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 UVRAGQ9P2Y5 699 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 BCORQ6W2J9 1755 aa11.03□□□□□ -0.64
VPS18-201ENST00000220509 CASZ1Q86V15 1759 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 NPM3O75607 178 aaKnown RBP11.02□□□□□ -0.64
VPS18-201ENST00000220509 PIAS1O75925 651 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 CALB1P05937 261 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 RARAP10276 462 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 CPA2P48052 419 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 CLK2P49760 499 aaKnown RBP11.02□□□□□ -0.64
VPS18-201ENST00000220509 CLCN3P51790 818 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 OVGP1Q12889 678 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 ITIH4Q14624 930 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 LACTB2Q53H82 288 aaPredicted RBP11.02□□□□□ -0.64
VPS18-201ENST00000220509 MDH1BQ5I0G3 518 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 SYCP2LQ5T4T6 812 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 XRRA1Q6P2D8 792 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 CCNYQ8ND76 341 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 PRPF31Q8WWY3 499 aaKnown RBP11.02□□□□□ -0.64
VPS18-201ENST00000220509 ATG4AQ8WYN0 398 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 TTC1Q99614 292 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 SPC25Q9HBM1 224 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 COL20A1Q9P218 1284 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 GMEB1Q9Y692 573 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 TAF1LQ8IZX4 1826 aa11.02□□□□□ -0.64
VPS18-201ENST00000220509 GTPBP10A4D1E9 387 aaKnown RBP11.02□□□□□ -0.65
VPS18-201ENST00000220509 ANKRD63C9JTQ0 380 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 H0YGN5 161 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 LIN7AO14910 233 aaPredicted RBP11.02□□□□□ -0.65
VPS18-201ENST00000220509 EXTL3O43909 919 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 SUPT20HL2P0C7V6 817 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 MUTP22033 750 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 GTF2H1P32780 548 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 RPL21P46778 160 aaKnown RBP11.02□□□□□ -0.65
VPS18-201ENST00000220509 IL9RQ01113 521 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 GPS1Q13098 491 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 FAM102AQ5T9C2 384 aaPredicted RBP11.02□□□□□ -0.65
VPS18-201ENST00000220509 ACTRT1Q8TDG2 376 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 ZBTB45Q96K62 511 aaPredicted RBP11.02□□□□□ -0.65
VPS18-201ENST00000220509 MCEEQ96PE7 176 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 SMC6Q96SB8 1091 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 CEP44Q9C0F1 390 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 GANQ9H2C0 597 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 ADARB2Q9NS39 739 aaKnown RBP11.02□□□□□ -0.65
VPS18-201ENST00000220509 TAS2R14Q9NYV8 317 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 NFS1Q9Y697 457 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 SBF2Q86WG5 1849 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 LAMB2P55268 1798 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 GOLGA8RI6L899 631 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 CCDC159P0C7I6 412 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 EPHX2P34913 555 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 MARCKSL1P49006 195 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 DHX34Q14147 1143 aaKnown RBP11.02□□□□□ -0.65
VPS18-201ENST00000220509 TMEM214Q6NUQ4 689 aaKnown RBP11.02□□□□□ -0.65
VPS18-201ENST00000220509 EFCAB12Q6NXP0 572 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 NDUFAF2Q8N183 169 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 CHST13Q8NET6 341 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 SCFD2Q8WU76 684 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 ARHGEF26Q96DR7 871 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 KIF12Q96FN5 646 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 EURLQ9NYK6 297 aa11.02□□□□□ -0.65
VPS18-201ENST00000220509 NKX1-2Q9UD57 310 aaPredicted RBP11.02□□□□□ -0.65
VPS18-201ENST00000220509 ASAP2O43150 1006 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 NOL4O94818 638 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 GSTA1P08263 222 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 GSTT2P0CG29 244 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 GSTT2BP0CG30 244 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 HNRNPH3P31942 346 aaKnown RBP11.01□□□□□ -0.65
VPS18-201ENST00000220509 DSG3P32926 999 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 PSMD6Q15008 389 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 PCSK7Q16549 785 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 ARHGEF18Q6ZSZ5 1173 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 FBXO16Q8IX29 292 aaPredicted RBP11.01□□□□□ -0.65
VPS18-201ENST00000220509 PLPP6Q8IY26 295 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 PYROXD1Q8WU10 500 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 DMAP1Q9NPF5 467 aaPredicted RBP11.01□□□□□ -0.65
VPS18-201ENST00000220509 PARVAQ9NVD7 372 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 PLIN4Q96Q06 1357 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 F5H423 210 aaPredicted RBP11.01□□□□□ -0.65
VPS18-201ENST00000220509 GRAP2O75791 330 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 TSPAN9O75954 239 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 INHBAP08476 426 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 HIRAP54198 1017 aaPredicted RBP11.01□□□□□ -0.65
VPS18-201ENST00000220509 CDR2Q01850 454 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 CNGA2Q16280 664 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 CRY1Q16526 586 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 HYIQ5T013 277 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 LGSNQ5TDP6 509 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 IZUMO3Q5VZ72 239 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 PHLDB3Q6NSJ2 640 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 EPM2AIP1Q7L775 607 aaPredicted RBP11.01□□□□□ -0.65
VPS18-201ENST00000220509 CCDC60Q8IWA6 550 aaPredicted RBP11.01□□□□□ -0.65
VPS18-201ENST00000220509 HACE1Q8IYU2 909 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 ANKRD49Q8WVL7 239 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 SPOCK2Q92563 424 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 MTMR12Q9C0I1 747 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 NPHS2Q9NP85 383 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 SLCO1B3Q9NPD5 702 aa11.01□□□□□ -0.65
VPS18-201ENST00000220509 GTF3C4Q9UKN8 822 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms