RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 DPEP3Q9H4B8 488 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 ZNF148Q9UQR1 794 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 TULP2O00295 520 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 DPYSL4O14531 572 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 ITGAVP06756 1048 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 FGFR1P11362 822 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 PDGFRAP16234 1089 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 RGS7P49802 495 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 DNAJC21Q5F1R6 531 aaKnown RBP31.17■■■□□ 2.58
PABPN1-201ENST00000216727 TRNP1Q6NT89 227 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 CROCCP2Q86T23 111 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 RPAINQ86UA6 219 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 SESTD1Q86VW0 696 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 TTC13Q8NBP0 860 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 PIWIL1Q96J94 861 aaKnown RBP31.17■■■□□ 2.58
PABPN1-201ENST00000216727 TMEM109Q9BVC6 243 aa31.17■■■□□ 2.58
PABPN1-201ENST00000216727 SLC6A3Q01959 620 aa31.16■■■□□ 2.58
PABPN1-201ENST00000216727 SERINC5Q86VE9 423 aa31.16■■■□□ 2.58
PABPN1-201ENST00000216727 SLC35B2Q8TB61 432 aa31.16■■■□□ 2.58
PABPN1-201ENST00000216727 SNX25Q9H3E2 840 aa31.16■■■□□ 2.58
PABPN1-201ENST00000216727 GOLGA2P5Q9HBQ8 144 aa31.16■■■□□ 2.58
PABPN1-201ENST00000216727 CHST12Q9NRB3 414 aa31.16■■■□□ 2.58
PABPN1-201ENST00000216727 PCSK1NQ9UHG2 260 aa31.16■■■□□ 2.58
PABPN1-201ENST00000216727 DCAF8L1A6NGE4 600 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 PTGESO14684 152 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 CAPN15O75808 1086 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 SHBGP04278 402 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 PDE4CQ08493 712 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 ARFGAP2Q8N6H7 521 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 ANKRD52Q8NB46 1076 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 PPP1R10Q96QC0 940 aaKnown RBP31.15■■■□□ 2.58
PABPN1-201ENST00000216727 PIK3R2O00459 728 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 IRAK1P51617 712 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 LILRA4P59901 499 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 TOP6BLQ8N6T0 577 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 KCTD6Q8NC69 237 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 SENP6Q9GZR1 1112 aaPredicted RBP31.15■■■□□ 2.58
PABPN1-201ENST00000216727 CYLDQ9NQC7 956 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 ST3GAL5Q9UNP4 418 aa31.15■■■□□ 2.58
PABPN1-201ENST00000216727 ADAMTS4O75173 837 aa31.14■■■□□ 2.58
PABPN1-201ENST00000216727 FAM163BP0C2L3 166 aa31.14■■■□□ 2.58
PABPN1-201ENST00000216727 RPL34P49207 117 aaKnown RBP31.14■■■□□ 2.58
PABPN1-201ENST00000216727 BST2Q10589 180 aaKnown RBP31.14■■■□□ 2.58
PABPN1-201ENST00000216727 CCDC25Q86WR0 208 aa31.14■■■□□ 2.58
PABPN1-201ENST00000216727 HUS1O60921 280 aa31.14■■■□□ 2.57
PABPN1-201ENST00000216727 LMO2P25791 158 aa31.14■■■□□ 2.57
PABPN1-201ENST00000216727 VPS41P49754 854 aa31.14■■■□□ 2.57
PABPN1-201ENST00000216727 BCAT1P54687 386 aa31.14■■■□□ 2.57
PABPN1-201ENST00000216727 FOXP3Q9BZS1 431 aa31.14■■■□□ 2.57
PABPN1-201ENST00000216727 PAPSS1O43252 624 aaPredicted RBP31.13■■■□□ 2.57
PABPN1-201ENST00000216727 CST8O60676 142 aa31.13■■■□□ 2.57
PABPN1-201ENST00000216727 ENDOD1O94919 500 aa31.13■■■□□ 2.57
PABPN1-201ENST00000216727 PDGFRBP09619 1106 aa31.13■■■□□ 2.57
PABPN1-201ENST00000216727 CHKAP35790 457 aa31.13■■■□□ 2.57
PABPN1-201ENST00000216727 PRKCZQ05513 592 aa31.13■■■□□ 2.57
PABPN1-201ENST00000216727 ZSCAN26Q16670 478 aa31.13■■■□□ 2.57
PABPN1-201ENST00000216727 IZUMO3Q5VZ72 239 aa31.13■■■□□ 2.57
PABPN1-201ENST00000216727 HIBCHQ6NVY1 386 aaPredicted RBP31.13■■■□□ 2.57
PABPN1-201ENST00000216727 KHSRPQ92945 711 aaKnown RBP eCLIP31.13■■■□□ 2.571e-8■■□□□ 12.8
PABPN1-201ENST00000216727 WNT8BQ93098 351 aa31.13■■■□□ 2.57
PABPN1-201ENST00000216727 PGM2Q96G03 612 aa31.13■■■□□ 2.57
PABPN1-201ENST00000216727 PEBP4Q96S96 227 aa31.13■■■□□ 2.57
PABPN1-201ENST00000216727 CDC42EP4Q9H3Q1 356 aaKnown RBP31.13■■■□□ 2.57
PABPN1-201ENST00000216727 GABBR2O75899 941 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 CHRNA1P02708 482 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 WARSP23381 471 aaKnown RBP31.12■■■□□ 2.57
PABPN1-201ENST00000216727 CCDC14Q49A88 953 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 LRRC31Q6UY01 552 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 CYP4V2Q6ZWL3 525 aaPredicted RBP31.12■■■□□ 2.57
PABPN1-201ENST00000216727 HACE1Q8IYU2 909 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 ADGRF2Q8IZF7 708 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 TNIP3Q96KP6 325 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 RSAD1Q9HA92 442 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 FAM105AQ9NUU6 356 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 SLC38A7Q9NVC3 462 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 HCRTO43612 131 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 CD48P09326 243 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 SCNN1AP37088 669 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 ATP1A2P50993 1020 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 GNGT1P63211 74 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 CACNB2Q08289 660 aaPredicted RBP31.12■■■□□ 2.57
PABPN1-201ENST00000216727 ZNF618Q5T7W0 954 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 RELL1Q8IUW5 271 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 SCUBE3Q8IX30 993 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 TLCD1Q96CP7 247 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 NCAPGQ9BPX3 1015 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 LPIN3Q9BQK8 851 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 LRRC4CQ9HCJ2 640 aa31.12■■■□□ 2.57
PABPN1-201ENST00000216727 BCCIPQ9P287 314 aaKnown RBP eCLIP31.12■■■□□ 2.57
PABPN1-201ENST00000216727 MGAT3Q09327 533 aa31.11■■■□□ 2.57
PABPN1-201ENST00000216727 C15orf59Q2T9L4 293 aaPredicted RBP31.11■■■□□ 2.57
PABPN1-201ENST00000216727 P3H1Q32P28 736 aa31.11■■■□□ 2.57
PABPN1-201ENST00000216727 SH3PXD2AQ5TCZ1 1133 aa31.11■■■□□ 2.57
PABPN1-201ENST00000216727 ACTL9Q8TC94 416 aa31.11■■■□□ 2.57
PABPN1-201ENST00000216727 HSPH1Q92598 858 aa31.11■■■□□ 2.57
PABPN1-201ENST00000216727 HAUS1Q96CS2 278 aa31.11■■■□□ 2.57
PABPN1-201ENST00000216727 ZFP42Q96MM3 310 aa31.11■■■□□ 2.57
PABPN1-201ENST00000216727 XPNPEP3Q9NQH7 507 aa31.11■■■□□ 2.57
PABPN1-201ENST00000216727 NOVA2Q9UNW9 492 aaKnown RBP31.11■■■□□ 2.57
PABPN1-201ENST00000216727 GRIN2DO15399 1336 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms