RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 DSG4Q86SJ6 1040 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 SERPINB12Q96P63 405 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 CINPQ9BW66 212 aaPredicted RBP15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 DSN1Q9H410 356 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 DDX18Q9NVP1 670 aaKnown RBP15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 ANAPC2Q9UJX6 822 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 DUSP12Q9UNI6 340 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 PABPC1P11940 636 aaKnown RBP15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 CEBPGP53567 150 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 KBTBD12Q3ZCT8 623 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 AGPAT1Q99943 283 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 SLC40A1Q9NP59 571 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 KPNA6O60684 536 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 RBMXL2O75526 392 aaKnown RBP15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 TGM2P21980 687 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 DNAJC3Q13217 504 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 LIN54Q6MZP7 749 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 ZCCHC7Q8N3Z6 543 aaKnown RBP15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 TFB1MQ8WVM0 346 aaKnown RBP15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 NOD2Q9HC29 1040 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 PRKAG3Q9UGI9 489 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 PIK3C2GO75747 1445 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 PLEKHA8P1O95397 391 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 C2CD6Q53TS8 623 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 PRKD2Q9BZL6 878 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 DENND4BO75064 1496 aaPredicted RBP15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 TBKBP1A7MCY6 615 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 PTGES3LE9PB15 166 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 TTC23Q5W5X9 447 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 FAM172AQ8WUF8 416 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 TMEM117Q9H0C3 514 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 RAVER2Q9HCJ3 691 aaKnown RBP15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 HOXC10Q9NYD6 342 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 PRKAB2O43741 272 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 RAB2AP61019 212 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 VAC14Q08AM6 782 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 R3HCC1LQ7Z5L2 792 aaKnown RBP15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 IPCEF1Q8WWN9 437 aaPredicted RBP15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 FAM118BQ9BPY3 351 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 PHF11Q9UIL8 331 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 SUPT7LO94864 414 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 NFKBIZQ9BYH8 718 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 HAO1Q9UJM8 370 aa15.11■□□□□ 0.01
SPTLC2-201ENST00000216484 ERVV-2B6SEH9 535 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 ABATP80404 500 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 CRYMQ14894 314 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 SNRNP48Q6IEG0 339 aaKnown RBP15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 TMEM26Q6ZUK4 368 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 FAM228AQ86W67 206 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 ARL10Q8N8L6 244 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 SPIRE2Q8WWL2 714 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 EFCAB1Q9HAE3 211 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 FGRP09769 529 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 GRSF1Q12849 480 aaKnown RBP eCLIP15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 C9orf72Q96LT7 481 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 RCOR1Q9UKL0 485 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 LOC100506127A0A0U1RQW1 187 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 CCDC182A6NF36 153 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 MYL12BO14950 172 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 ASNSP08243 561 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 IRAK1BP1Q5VVH5 260 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 BLOC1S5Q8TDH9 187 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 F8VZ95 297 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 RTN3O95197 1032 aaPredicted RBP15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 GH2P01242 217 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 UMPSP11172 480 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 VAV1P15498 845 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 SERPINB8P50452 374 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 C21orf59P57076 290 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 POLD3Q15054 466 aaPredicted RBP15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 MFSD14CQ5VZR4 134 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 RPTNQ6XPR3 784 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 LRRC74BQ6ZQY2 392 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 ECE2O60344 883 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 VPS9D1Q9Y2B5 631 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 RBM7Q9Y580 266 aaKnown RBP15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 TSPAN19P0C672 248 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 ITIH2P19823 946 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 CACNA2D1P54289 1103 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 ITGA1P56199 1179 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 PURAQ00577 322 aaKnown RBP15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 CYP24A1Q07973 514 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 OTUD3Q5T2D3 398 aaPredicted RBP15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 CHPFQ8IZ52 775 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 FAR2Q96K12 515 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 SENP2Q9HC62 589 aa15.1■□□□□ 0.01
SPTLC2-201ENST00000216484 PMPCBO75439 489 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 MSH3P20585 1137 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 HOXD10P28358 340 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 NFYCQ13952 458 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 MGAT5BQ3V5L5 792 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 ATP6AP1LQ52LC2 224 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 RAD51BO15315 384 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 STAU1O95793 577 aaKnown RBP15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 IFNA14P01570 189 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 TMEM132DQ14C87 1099 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 WDR72Q3MJ13 1102 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 DENND1BQ6P3S1 775 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 NECAB2Q7Z6G3 386 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms