RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 RESP18Q5W5W9 173 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 VSTM1Q6UX27 236 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 CEP68Q76N32 757 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 HS2ST1Q7LGA3 356 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.01■□□□□ 0.15
UPK3A-201ENST00000216211 CPA6Q8N4T0 437 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 OR6B3Q8NGW1 331 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 MYCBPAPQ8TBZ2 947 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 OSCP1Q8WVF1 389 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 PCED1BQ96HM7 432 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 GZF1Q9H116 711 aaPredicted RBP16.01■□□□□ 0.15
UPK3A-201ENST00000216211 DPEP3Q9H4B8 488 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 ECT2Q9H8V3 914 aa16.01■□□□□ 0.15
UPK3A-201ENST00000216211 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.01■□□□□ 0.15
UPK3A-201ENST00000216211 MYOFQ9NZM1 2061 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 PVALEFA0A1B0GWK0 134 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 RNF40O75150 1001 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 TACC1O75410 805 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 HDCP19113 662 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 SDHBP21912 280 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 HOXA6P31267 233 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 CASP4P49662 377 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 MYL6P60660 151 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 TNNC1P63316 161 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 AMPD2Q01433 879 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 DNM1Q05193 864 aaKnown RBP16■□□□□ 0.15
UPK3A-201ENST00000216211 DENND5BQ6ZUT9 1274 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 SH3RF2Q8TEC5 729 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 P2RY13Q9BPV8 354 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 POLR3BQ9NW08 1133 aaPredicted RBP16■□□□□ 0.15
UPK3A-201ENST00000216211 SERTAD1Q9UHV2 236 aa16■□□□□ 0.15
UPK3A-201ENST00000216211 CDV3Q9UKY7 258 aaKnown RBP16■□□□□ 0.15
UPK3A-201ENST00000216211 F8VP50 259 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 TRIM66O15016 1216 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 EXOC3O60645 756 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 PTPN1P18031 435 aaKnown RBP15.99■□□□□ 0.15
UPK3A-201ENST00000216211 PTMSP20962 102 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 DRD1P21728 446 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 CACNA2D1P54289 1103 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 TRPC3Q13507 836 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 KNOP1Q1ED39 458 aaKnown RBP15.99■□□□□ 0.15
UPK3A-201ENST00000216211 EML3Q32P44 896 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 C12orf56Q8IXR9 622 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 CEP57L1Q8IYX8 460 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 FAM160A2Q8N612 972 aaPredicted RBP15.99■□□□□ 0.15
UPK3A-201ENST00000216211 PLEKHO2Q8TD55 490 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 ATP2A3Q93084 1043 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 LINC00597Q9H2U6 94 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 TRPM5Q9NZQ8 1165 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 CGNQ9P2M7 1197 aaKnown RBP15.99■□□□□ 0.15
UPK3A-201ENST00000216211 NXF1Q9UBU9 619 aaKnown RBP15.99■□□□□ 0.15
UPK3A-201ENST00000216211 SLC8A2Q9UPR5 921 aa15.99■□□□□ 0.15
UPK3A-201ENST00000216211 CLDN5O00501 218 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 KLRC4O43908 158 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 LRP3O75074 770 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 ATG13O75143 517 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 PHACTR2O75167 634 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 TCF3P15923 654 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 ZXDBP98169 803 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 IFRD2Q12894 506 aaPredicted RBP15.98■□□□□ 0.15
UPK3A-201ENST00000216211 RPLP0P6Q8NHW5 317 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 EZH1Q92800 747 aaPredicted RBP15.98■□□□□ 0.15
UPK3A-201ENST00000216211 CD101Q93033 1021 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 C8orf48Q96LL4 319 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 CEP295NLQ96MC4 621 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 TTLL2Q9BWV7 592 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 XYLT2Q9H1B5 865 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 SEMA4GQ9NTN9 838 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 TMEM30AQ9NV96 361 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 CFAP45Q9UL16 551 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 ARHGAP26Q9UNA1 814 aa15.98■□□□□ 0.15
UPK3A-201ENST00000216211 SDK1Q7Z5N4 2213 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 DCDC2BA2VCK2 349 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 LRRIQ3A6PVS8 624 aaPredicted RBP15.97■□□□□ 0.15
UPK3A-201ENST00000216211 A8MXQ7 604 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 LEFTY2O00292 366 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 ACTN4O43707 911 aaKnown RBP15.97■□□□□ 0.15
UPK3A-201ENST00000216211 CLSTN1O94985 981 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 STAU1O95793 577 aaKnown RBP15.97■□□□□ 0.15
UPK3A-201ENST00000216211 ABL1P00519 1130 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 FAM163BP0C2L3 166 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 ATICP31939 592 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 PDE6CP51160 858 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 NOP14P78316 857 aaKnown RBP15.97■□□□□ 0.15
UPK3A-201ENST00000216211 PSMD2Q13200 908 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 BIRC3Q13489 604 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 TDRD10Q5VZ19 366 aaKnown RBP15.97■□□□□ 0.15
UPK3A-201ENST00000216211 ATL3Q6DD88 541 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 PRR23CQ6ZRP0 262 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 SYAP1Q96A49 352 aaPredicted RBP15.97■□□□□ 0.15
UPK3A-201ENST00000216211 EXOC4Q96A65 974 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 ELMO3Q96BJ8 720 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 HHIPQ96QV1 700 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 RTKNQ9BST9 563 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 B3GNT5Q9BYG0 378 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 ZNF518BQ9C0D4 1074 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 RNF38Q9H0F5 515 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 SMYD3Q9H7B4 428 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 EHD2Q9NZN4 543 aa15.97■□□□□ 0.15
UPK3A-201ENST00000216211 RCOR1Q9UKL0 485 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms