RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 CDR2Q01850 454 aa11.12□□□□□ -0.63
CD4-201ENST00000011653 SV2CQ496J9 727 aa11.12□□□□□ -0.63
CD4-201ENST00000011653 RNF187Q5TA31 235 aaPredicted RBP11.12□□□□□ -0.63
CD4-201ENST00000011653 COL13A1Q5TAT6 717 aaPredicted RBP11.12□□□□□ -0.63
CD4-201ENST00000011653 CYP4A22Q5TCH4 519 aa11.12□□□□□ -0.63
CD4-201ENST00000011653 MRPL10Q7Z7H8 261 aaKnown RBP11.12□□□□□ -0.63
CD4-201ENST00000011653 ZNF598Q86UK7 904 aaKnown RBP11.12□□□□□ -0.63
CD4-201ENST00000011653 NT5DC4Q86YG4 428 aa11.12□□□□□ -0.63
CD4-201ENST00000011653 FMNL3Q8IVF7 1028 aa11.12□□□□□ -0.63
CD4-201ENST00000011653 CTNNBL1Q8WYA6 563 aaPredicted RBP11.12□□□□□ -0.63
CD4-201ENST00000011653 ARHGEF26Q96DR7 871 aa11.12□□□□□ -0.63
CD4-201ENST00000011653 BTBD6Q96KE9 485 aa11.12□□□□□ -0.63
CD4-201ENST00000011653 NT5C1AQ9BXI3 368 aa11.12□□□□□ -0.63
CD4-201ENST00000011653 RAB17Q9H0T7 212 aa11.12□□□□□ -0.63
CD4-201ENST00000011653 SYNCQ9H7C4 482 aa11.12□□□□□ -0.63
CD4-201ENST00000011653 CTTNBP2NLQ9P2B4 639 aa11.12□□□□□ -0.63
CD4-201ENST00000011653 CEP83Q9Y592 693 aa11.12□□□□□ -0.63
CD4-201ENST00000011653 NCANO14594 1321 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 GOLGA8SH3BPF8 625 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 M0QYV0 167 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 MYO1FO00160 1098 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 CLDN5O00501 218 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 C2CD2LO14523 706 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 TADA2AO75478 443 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 LLGL1Q15334 1064 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 TMC3Q7Z5M5 1100 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 ANKLE1Q8NAG6 615 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 SLC4A11Q8NBS3 891 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 C3orf20Q8ND61 904 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 ZNF653Q96CK0 615 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 TMEM176AQ96HP8 235 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 TMEM161AQ9NX61 479 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 TJP2Q9UDY2 1190 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 TTC7AQ9ULT0 858 aaPredicted RBP11.11□□□□□ -0.63
CD4-201ENST00000011653 NME7Q9Y5B8 376 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 FGGP02679 453 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 TMEM253P0C7T8 217 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 HNRNPH1P31943 449 aaKnown RBP11.11□□□□□ -0.63
CD4-201ENST00000011653 NSFP46459 744 aaKnown RBP11.11□□□□□ -0.63
CD4-201ENST00000011653 PPP2R2AP63151 447 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 IFRD2Q12894 506 aaPredicted RBP11.11□□□□□ -0.63
CD4-201ENST00000011653 GRIK3Q13003 919 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 TUSC3Q13454 348 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 PPP2R5EQ16537 467 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 DENND1BQ6P3S1 775 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 OSTM1Q86WC4 334 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 NAP1L3Q99457 506 aaPredicted RBP11.11□□□□□ -0.63
CD4-201ENST00000011653 ZBED2Q9BTP6 218 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 DPH5Q9H2P9 285 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 SLC12A6Q9UHW9 1150 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 BARX2Q9UMQ3 279 aaPredicted RBP11.11□□□□□ -0.63
CD4-201ENST00000011653 DERAQ9Y315 318 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 SQORQ9Y6N5 450 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 GOLGA6L10A0A0M3HER8 536 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 GMNCA6NCL1 334 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 BUB1BO60566 1050 aaPredicted RBP11.11□□□□□ -0.63
CD4-201ENST00000011653 CILPO75339 1184 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 TIMP1P01033 207 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 OR4Q2P0C623 313 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 BPIFB4P59827 614 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 YWHAEP62258 255 aaKnown RBP11.11□□□□□ -0.63
CD4-201ENST00000011653 ENPEPQ07075 957 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 DHX9Q08211 1270 aaKnown RBP11.11□□□□□ -0.63
CD4-201ENST00000011653 KRT71Q3SY84 523 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 LRRC52Q8N7C0 313 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 SEC14L1Q92503 715 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 MED10Q9BTT4 135 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 DDX43Q9NXZ2 648 aaKnown RBP11.11□□□□□ -0.63
CD4-201ENST00000011653 GTF3C4Q9UKN8 822 aa11.11□□□□□ -0.63
CD4-201ENST00000011653 EOMESO95936 686 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 FLT3P36888 993 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 FNTAP49354 379 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 IFFO1Q0D2I5 559 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 IFT88Q13099 833 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 BIRC2Q13490 618 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 UPP1Q16831 310 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 SGO2Q562F6 1265 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 XKR4Q5GH76 650 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 PPP1R26Q5T8A7 1209 aaPredicted RBP11.1□□□□□ -0.63
CD4-201ENST00000011653 ZNF365Q70YC5 407 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 TMEM199Q8N511 208 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 SLC35G2Q8TBE7 412 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 DDX1Q92499 740 aaKnown RBP11.1□□□□□ -0.63
CD4-201ENST00000011653 BCO2Q9BYV7 579 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 NRDE2Q9H7Z3 1164 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 MTUS1Q9ULD2 1270 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 NOVA2Q9UNW9 492 aaKnown RBP11.1□□□□□ -0.63
CD4-201ENST00000011653 CHD7Q9P2D1 2997 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 SSR1P43307 286 aaKnown RBP11.1□□□□□ -0.63
CD4-201ENST00000011653 TTC3P53804 2025 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 EIF3BP55884 814 aaKnown RBP11.1□□□□□ -0.63
CD4-201ENST00000011653 CLUL1Q15846 466 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 DAB2IPQ5VWQ8 1189 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 TMEM173Q86WV6 379 aaPredicted RBP11.1□□□□□ -0.63
CD4-201ENST00000011653 CABS1Q96KC9 395 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 FMO2Q99518 471 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 RHOBTB2Q9BYZ6 727 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 CARD9Q9H257 536 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 TSPAN16Q9UKR8 245 aa11.1□□□□□ -0.63
CD4-201ENST00000011653 TRAPPC3O43617 180 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms