RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Nr1h3Q9Z0Y9 445 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Trip11E9Q512 1976 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ankfn1A0A140LIW7 1083 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Gm10250G3X9L6 160 aaKnown RBP13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 HdcP23738 662 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Eif3eP60229 445 aaKnown RBP13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Taf1bP97358 586 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 InhbaQ04998 424 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 OtulinQ3UCV8 352 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ugt3a1Q3UP75 523 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Xlr3aQ60595 226 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 PrkciQ62074 595 aaKnown RBP13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Tfdp2Q64163 446 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Tpp2Q64514 1262 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Prr18Q6PAN7 307 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 RfflQ6ZQM0 377 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Vat1lQ80TB8 417 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Chmp2bQ8BJF9 213 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Znf76Q8BMU0 568 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Mgat5Q8R4G6 740 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Trem2Q99NH8 227 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Atp5hQ9DCX2 161 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Nupr1Q9WTK0 80 aa13.69□□□□□ -0.22
Ssr1-203ENSMUST00000225246 UmpsP13439 481 aaKnown RBP13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ass1P16460 412 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Stx2Q00262 289 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Neurl1bQ0MW30 546 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Myl6Q60605 151 aaKnown RBP13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Grik1Q60934 836 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 HarsQ61035 509 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ino80dQ66JY2 873 aaKnown RBP13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Fcrl5Q68SN8 596 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 ScapQ6GQT6 1276 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Magea3Q6T340 320 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Tas2r109Q7M707 316 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Znf12Q7TSI0 686 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Sh3tc2Q80VA5 1289 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Pdzph1Q8BGR1 1238 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Tubgcp5Q8BKN5 1024 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Tor1aip2Q8BYU6 502 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ttc39bQ8BYY4 617 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Pgm2l1Q8CAA7 621 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 PygbQ8CI94 843 aaKnown RBP13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Mcoln2Q8K595 566 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Il36gQ8R460 164 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Mxra7Q9CZH7 178 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Dtwd1Q9D8U7 304 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 HemgnQ9ERZ0 503 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Psmg1Q9JK23 289 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Dicer1Q8R418 1916 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Fndc3c1Q6DFV6 1356 aa13.68□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Lilra5D3Z7A9 295 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Apold1E9Q0X2 246 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Speer4f2E9Q366 295 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Eddm13E9Q7F5 164 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Gm4841E9QAA8 417 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Per2O54943 1257 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Krt13P08730 437 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Stmn2P55821 179 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Gabrb2P63137 512 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Kcna2P63141 499 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ly9Q01965 654 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Tgfbrap1Q3UR70 860 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ksr1Q61097 873 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Gata6Q61169 589 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 PapolaQ61183 739 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Acvrl1Q61288 502 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 SnrpaQ62189 287 aaKnown RBP13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Capn11Q6J756 714 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Trpm4Q7TN37 1213 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Exoc3l1Q8BI71 739 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Gpr150Q8BL07 427 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Rcn2Q8BP92 320 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Bmt2Q8BXK4 403 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Slc7a14Q8BXR1 771 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Tasp1Q8R1G1 420 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Mtss1Q8R1S4 759 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Olfr809Q8VEX8 328 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ier5lQ99J55 406 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 CoprsQ9CQ13 173 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Rpap3Q9D706 660 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Dclre1aQ9JIC3 1026 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Mbd1Q9Z2E2 636 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Zswim8Q3UHH1 1832 aaKnown RBP13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Cdr1E9Q0B4 517 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Ccdc85cE9Q6B2 420 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Has3O08650 554 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 ThbdP15306 577 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Psmc4P54775 418 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Smyd1P97443 490 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Epas1P97481 874 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Tff2Q03404 129 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Pi4k2aQ2TBE6 479 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 FaxcQ3UMF9 409 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Pdp2Q504M2 532 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Tab3Q571K4 716 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Eif2dQ61211 570 aaKnown RBP13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Grid2Q61625 1007 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Map3k7Q62073 579 aa13.67□□□□□ -0.22
Ssr1-203ENSMUST00000225246 Gigyf2Q6Y7W8 1291 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms