RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Hoxb4P10284 250 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Nfkb1P25799 971 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Ugt1a2P70691 533 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Pak6Q3ULB5 682 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 4933416C03RikQ3V063 378 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Nr2c1Q505F1 590 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Ugt1a9Q62452 528 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Ugt1a1Q63886 535 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Ugt1a6Q64435 531 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 E2f7Q6S7F2 904 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Ugt1a7cQ6ZQM8 531 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Slc7a6osQ7TPE5 306 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Itpk1Q8BYN3 419 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Pcdhb2Q91Y00 799 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 PignQ9R1S3 931 aa15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Map1bP14873 2464 aaKnown RBP15.38■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Lama1P19137 3084 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 A0A1L1STL9 112 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Gm13089A2AGW7 455 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Zfand4D3Z3C6 739 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Gm10722F6VLK5 217 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Irf8P23611 424 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 AdkP55264 361 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 YwhaqP68254 245 aaKnown RBP15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Ubash3aQ3V3E1 624 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Dnajc1Q61712 552 aaKnown RBP15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Pabpc2Q62029 628 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 DgkqQ6P5E8 934 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Pcdhb14Q6PB90 796 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Haus7Q8BKT8 364 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Nipal1Q8BMW7 416 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Tmem74Q8BQU7 305 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Slc43a1Q8BSM7 564 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Zfp113Q8C689 439 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Mat1aQ91X83 396 aaKnown RBP15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Tex46Q9CPU3 165 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Ddah1Q9CWS0 285 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Prmt2Q9R144 448 aa15.37■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Cacna2d1O08532 1103 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Cyp4a14O35728 507 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Cldn5O54942 218 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 P01652 108 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Hoxa9P09631 271 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 RargP18911 458 aaKnown RBP15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Tnnc1P19123 161 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 CremP27699 357 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 IduaP48441 634 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Kiaa1468Q148V7 1216 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Aarsd1Q3THG9 412 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Gtf3c3Q3TMP1 882 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Bbof1Q3V079 533 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Zfp235Q499D5 702 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Zcchc2Q69ZB8 1166 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Camsap3Q80VC9 1252 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Fbxo38Q8BMI0 1194 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Slc24a5Q8C261 501 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Sit1Q8C503 180 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Sik2Q8CFH6 931 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Hmgcll1Q8JZS7 343 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Vmn1r206Q8R277 312 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Slc30a5Q8R4H9 761 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Q91WD4 421 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Rgs18Q99PG4 235 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Pex11aQ9Z211 246 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 PtprdQ64487 1912 aa15.36■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Gm5485A0A1D5RM98 91 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Mindy4b-psA0A1W2P7H6 457 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Vmn1r55E9Q8I6 310 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Gm10134F6ZQC6 126 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Sema4dO09126 861 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Man2b1O09159 1013 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Rasa2P58069 847 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Cct6aP80317 531 aaKnown RBP15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Cep76Q0VEJ0 659 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Tstd2Q3U269 495 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Ceacam5Q3UKK2 947 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 PfplQ5RKV8 702 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 PostnQ62009 838 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Bfsp2Q6NVD9 416 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Scyl2Q8CFE4 930 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Slc35f5Q8R314 524 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Gemin2Q9CQQ4 269 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Prpf40aQ9R1C7 953 aaKnown RBP15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Eml5Q8BQM8 1977 aa15.35■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 BC034090A0A087WP46 1202 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Serpina16D3Z660 418 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Vmn2r100E9QAZ9 850 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Sdc4O35988 198 aaKnown RBP15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Eif3dO70194 548 aaKnown RBP15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Gjb3P28231 270 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Anxa5P48036 319 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 IvlP48997 467 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Atp6v1dP57746 247 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Ppp4r3cQ3V0Y1 813 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Ccdc110Q3V125 848 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Mtnr1aQ61184 353 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Arnt2Q61324 712 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Ptpn21Q62136 1176 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 NovQ64299 354 aa15.34■□□□□ 0.05
Ccdc88c-204ENSMUST00000223097 Ggnbp1Q6K1E7 370 aa15.34■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 65.3 ms