RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Trpv2Q9WTR1 756 aa32.11■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Gabbr1Q9WV18 960 aa32.11■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Ighv11-2A0A075B5R8 117 aa32.11■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Zfp990B1AVN5 605 aa32.11■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 ErmardE9Q048 622 aa32.11■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Btg3P50615 252 aa32.11■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Dbx1P52950 335 aa32.11■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Ddx3xQ62167 662 aaKnown RBP32.11■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Pld1Q9Z280 1074 aa32.11■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Apol11aE9PZG0 334 aa32.1■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Dmp1O55188 503 aa32.1■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Adamts8P57110 905 aa32.1■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Stip1Q60864 543 aaKnown RBP32.1■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 FsbpQ8BKE5 299 aa32.1■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 BbxQ8VBW5 907 aa32.1■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Calml4Q91WQ9 153 aa32.1■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Htatip2Q9Z2G9 242 aa32.1■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Szt2A2A9C3 3431 aa32.09■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Fam81bA0A140LI28 432 aa32.09■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Vmn2r115E9Q0E7 857 aa32.09■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Cldn5O54942 218 aa32.09■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Lrrc47Q505F5 581 aaKnown RBP32.09■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Cldn11Q60771 207 aa32.09■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 EfsQ64355 560 aa32.09■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Znf512Q69Z99 562 aa32.09■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Nucks1Q80XU3 234 aaKnown RBP32.09■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Cep290Q6A078 2472 aa32.09■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 AU015836B2RUM3 263 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Myo1aO88329 1043 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Slc11a2P49282 568 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Krba1Q6NXZ1 1043 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Mon1aQ6PDG8 556 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Lrrc8aQ80WG5 810 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Anapc5Q8BTZ4 740 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Olfr1353Q8VGU8 309 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Mcrs1Q99L90 462 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Cyp4f13Q99N19 523 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Rpa3Q9CQ71 121 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 ArskQ9D2L1 553 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Dlgap1Q9D415 992 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Vwa8Q8CC88 1905 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Fibcd1A2AV25 459 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Mup10A2BIN1 180 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Mup14A2CEK7 180 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Mup19A9C497 187 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Mup15A9R9W0 180 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Mup17B5X0G2 180 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Mup8E9PVW0 235 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Mup7E9QA79 235 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Gm8334F7CD45 553 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Mup6P02762 180 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Nr3c1P06537 783 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Mup1P11588 180 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Mup2P11589 180 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Pth2rQ91V95 546 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Lpin3Q99PI4 848 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Syde1Q9DBZ9 737 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 St6galnac4Q9R2B6 360 aa32.08■■■□□ 2.73
Ctdnep1-201ENSMUST00000108593 Rfx8D3YU81 596 aa32.07■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Cyp2t4E9PWV0 503 aa32.07■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Acot1O55137 419 aa32.07■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 TktP40142 623 aaKnown RBP32.07■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Krt80Q0VBK2 452 aa32.07■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Ssr4Q62186 172 aa32.07■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Maip1Q8BHE8 291 aa32.07■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Hmgcll1Q8JZS7 343 aa32.07■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 CtbsQ8R242 366 aa32.07■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Chordc1Q9D1P4 331 aaKnown RBP32.07■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Fzd2Q9JIP6 570 aa32.07■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Uchl3Q9JKB1 230 aa32.07■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Hk1P17710 974 aa32.06■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Upp1P52624 311 aa32.06■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 SpdyaQ5IBH7 310 aa32.06■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Tmem232Q5K6N0 675 aa32.06■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 WhrnQ80VW5 918 aa32.06■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Tmem169Q8BG50 297 aa32.06■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Brd3Q8K2F0 726 aaKnown RBP32.06■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Stap2Q8R0L1 411 aa32.06■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Cpxm2Q9D2L5 764 aa32.06■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Rtl9Q32KG4 1339 aa32.06■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Lrrc63A6H694 637 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Slc2a4P14142 509 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Stat4P42228 749 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 NsfP46460 744 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Mapk6Q61532 720 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Zfp512bQ6PHP4 879 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Defb34Q7TNV8 81 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Psmd5Q8BJY1 504 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Fbxo38Q8BMI0 1194 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Slco2b1Q8BXB6 683 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Ifi205aQ8CGE8 404 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Mtnr1bQ8CIQ6 364 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Olfr356Q8VFP5 315 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Znf622Q91VY9 476 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Cul2Q9D4H8 745 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Adamts5Q9R001 930 aa32.05■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Igkv5-45A0A0B4J1J1 115 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Gm16427J3QN52 483 aa32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 PurbO35295 324 aaKnown RBP32.04■■■□□ 2.72
Ctdnep1-201ENSMUST00000108593 Fam43aQ8BUP8 424 aa32.04■■■□□ 2.72
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms