RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Gh1P06880 216 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rrm2P11157 390 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 CtsaP16675 474 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Il1rapl1P59823 695 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 P3h2Q8CG71 703 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ginm1Q91WR6 327 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Prpf6Q91YR7 941 aaKnown RBP9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Spef1Q99JL1 234 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Kat2bQ9JHD1 813 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Calm4Q9JM83 148 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Bpifb4A2BGH0 617 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ercc2O08811 760 aaKnown RBP9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pcdha4O88689 947 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Actr1aP61164 376 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Slc39a6Q8C145 765 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ccdc198Q9CPZ1 294 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Polr3hQ9D2C6 204 aaKnown RBP9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Htatip2Q9Z2G9 242 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tmem116A0A0G2JGD3 401 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pdzd8B9EJ80 1147 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Mybpc1D3YU50 1127 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tada2bD3Z4Z0 420 aaKnown RBP9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Usp53P15975 1069 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Mmp2P33434 662 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rab6bP61294 208 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 RalaP63321 206 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 PrkczQ02956 592 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Prelid2Q0VBB0 177 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Myo1dQ5SYD0 1006 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gimap7Q8R379 293 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 HnmtQ91VF2 295 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 AvenQ9D9K3 342 aa9.3□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cnksr1A2A9K7 700 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm11758A2BEI6 360 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm11757A2BEI8 360 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm11239E9Q5Z9 360 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm11237F2Z3W5 360 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm11238F2Z478 360 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm11236J3QMS7 360 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 AgxtO35423 414 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 S100a8P27005 89 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm428Q3UTE2 360 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Olfr141Q60880 325 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Trpa1Q8BLA8 1125 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 GancQ8BVW0 898 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ccdc142Q8CAI1 738 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ms4a6dQ99N07 247 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 LactbQ9EP89 551 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ube3bQ9ES34 1070 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tspan3Q9QY33 253 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Serpinb2P12388 415 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 PtpraP18052 829 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Zfy2P20662 777 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Glycam1Q02596 151 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 RalgdsQ03385 852 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Kcnd1Q03719 651 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Snrnp70Q62376 448 aaKnown RBP9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Asap2Q7SIG6 958 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Wdr26Q8C6G8 641 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ston1Q8CDJ8 730 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Hspa12aQ8K0U4 675 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Onecut3Q8K557 490 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Akr1e2Q9DCT1 301 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Mtx3D3YTP3 312 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ccdc62E9PVD1 701 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm3095E9Q058 166 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pcdhb9E9Q5G2 828 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Zbtb11G5E8B9 1050 aaKnown RBP9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Serpinb6eI7HJI3 429 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Mtco1P00397 514 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 PahP16331 453 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gjc1P28229 396 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Grin2cQ01098 1239 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Zscan21Q07231 555 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 CrtamQ149L7 389 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gsk3aQ2NL51 490 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Armc7Q3UJZ3 198 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Fam102bQ8BQS4 339 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pkn2Q8BWW9 983 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tbc1d14Q8CGA2 694 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Lrrc14Q8VC16 493 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Eea1Q8BL66 1411 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 4921501E09RikA0A0R4J054 908 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Dmrtb1A2A9I7 359 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 CerklA2AQH1 525 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Znf551B2RUI1 696 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gcnt4E9Q649 455 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Serpina3kP07759 418 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Kcna3P16390 528 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 FanccP50652 591 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Eif4a1P60843 406 aaKnown RBP9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ctps1P70698 591 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ugt3a1Q3UP75 523 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Rassf5Q5EBH1 413 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Mup20Q5FW60 181 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Foxd3Q61060 465 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ddx19aQ61655 478 aaKnown RBP9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ankle2Q6P1H6 964 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tmc3Q7TQ69 1130 aa9.29□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Mib1Q80SY4 1006 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms