RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Pdlim7Q3TJD7 457 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Q3TQQ9 903 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Zscan4fQ3URS2 506 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Sfi1Q3UZY0 1216 aaKnown RBP15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 4933427I04RikQ3V053 235 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Clhc1Q5M6W3 596 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 IqceQ6PCQ0 778 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Zscan4cQ80VJ6 506 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Vmn2r43Q80Z08 845 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Fbxw8Q8BIA4 598 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Panx3Q8CEG0 392 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Smtnl2Q8CI12 456 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Q8CIL4 281 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Taco1Q8K0Z7 294 aaKnown RBP15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Acvr1cQ8K348 493 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Nudcd3Q8R1N4 363 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Chst12Q99LL3 419 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Thg1lQ9CY52 298 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Gins2Q9D600 185 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Col2a1P28481 1487 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Cntnap5cQ0V8T7 1305 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Gm29133A0A1B0GT72 266 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Dync1i2O88487 612 aaKnown RBP15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Usp46P62069 366 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Dlg3P70175 849 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Ripply1Q2WG77 201 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Sult1d1Q3UZZ6 295 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Ankrd6Q69ZU8 712 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Ppp1r12bQ8BG95 976 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Ccser1Q8C0C4 895 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Pnma1Q8C1C8 353 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Sugp2Q8CH09 1067 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Spag16Q8K450 639 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Kdm4bQ91VY5 1086 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Cpt1bQ924X2 772 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Katnal2Q9D3R6 539 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Plscr2Q9DCW2 307 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Tmod4Q9JLH8 345 aa15.42■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Slc27a3O88561 667 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Akap10O88845 662 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Tph1P17532 447 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Grb7Q03160 535 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Arhgef18Q6P9R4 1021 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 EtnpplQ8BWU8 499 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Hdac7Q8C2B3 938 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 CherpQ8CGZ0 936 aaKnown RBP15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Tdrd3Q91W18 743 aaKnown RBP15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Nrip2Q9JHR9 270 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Ror1Q9Z139 937 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Zfc3h1B2RT41 1992 aaKnown RBP15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Plxnb2B2RXS4 1842 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 EsrraO08580 422 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Itgb5O70309 798 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Gabrb2P63137 512 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Spata18Q0P557 537 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Cyp2j11Q3UNV2 504 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 ScapQ6GQT6 1276 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 March4Q80TE3 409 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Sh3tc2Q80VA5 1289 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Exoc3l1Q8BI71 739 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Nipal4Q8BZF2 406 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Lrrc19Q8BZT5 364 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Adgra1Q8C4G9 578 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Rfx6Q8C7R7 927 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Ephb1Q8CBF3 984 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 MypopQ8R4U1 393 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Itm2cQ91VK4 269 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Atp6v1b1Q91YH6 513 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Ttc30a1Q99J38 664 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 PompQ9CQT5 141 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Oma1Q9D8H7 521 aa15.41■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Plekhg4A0A1L1SU27 1217 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Vti1aO89116 217 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Gsta4P24472 222 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Kcnj6P48542 425 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Bop1P97452 732 aaKnown RBP15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Gdf3Q07104 366 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Fdxacb1Q3UY23 622 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Kcna4Q61423 654 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 SnrpaQ62189 287 aaKnown RBP15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Olfr299Q7TS05 330 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Pcolce2Q8R4W6 414 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 RnpepQ8VCT3 650 aaKnown RBP15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Psmd6Q99JI4 389 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Atp6v1g1Q9CR51 118 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Fam136aQ9CR98 138 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 MceeQ9D1I5 178 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Borcs5Q9D920 195 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Olig1Q9JKN5 260 aa15.4■□□□□ 0.06
Ushbp1-201ENSMUST00000049184 Mageb4A2A9R3 556 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 A630010A05RikA9C473 232 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Hsd11b2P51661 386 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Eif3eP60229 445 aaKnown RBP15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Lzts1P60853 599 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Serpina1eQ00898 413 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Hipk4Q3V016 616 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Abi3bpQ59IW6 1179 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Pdzph1Q8BGR1 1238 aa15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Ipo5Q8BKC5 1097 aaKnown RBP15.39■□□□□ 0.05
Ushbp1-201ENSMUST00000049184 Rhpn2Q8BWR8 686 aa15.39■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms