RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W GAT4P40569 121 aa2.95□□□□□ -1.94
SWI1YPL016W YNL046WP53956 172 aa2.95□□□□□ -1.94
SWI1YPL016W IRC23Q08416 157 aa2.95□□□□□ -1.94
SWI1YPL016W PRM7Q12459 698 aa2.95□□□□□ -1.94
SWI1YPL016W YDR381C-AQ3E6R5 114 aa2.95□□□□□ -1.94
SWI1YPL016W YFL019CP43576 117 aa2.94□□□□□ -1.94
SWI1YPL016W FIP1P45976 327 aa2.94□□□□□ -1.94
SWI1YPL016W YNL143CP53908 130 aa2.94□□□□□ -1.94
SWI1YPL016W COF1Q03048 143 aaKnown RBP2.94□□□□□ -1.94
SWI1YPL016W MIM1Q08176 113 aa2.94□□□□□ -1.94
SWI1YPL016W PAD1P33751 242 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
SWI1YPL016W MTC6P38849 526 aa2.94□□□□□ -1.94
SWI1YPL016W YAR029WP39549 74 aa2.94□□□□□ -1.94
SWI1YPL016W SIM1P40472 476 aa2.94□□□□□ -1.94
SWI1YPL016W IRC25Q07951 179 aa2.94□□□□□ -1.94
SWI1YPL016W YLR112WQ12130 139 aa2.94□□□□□ -1.94
SWI1YPL016W YHR213WP0CI67 198 aa2.94□□□□□ -1.94
SWI1YPL016W SVP26P38869 228 aa2.94□□□□□ -1.94
SWI1YPL016W RPS14BP39516 138 aaKnown RBP2.94□□□□□ -1.94
SWI1YPL016W YNL190WP53872 204 aa2.94□□□□□ -1.94
SWI1YPL016W SWS2P53937 143 aa2.94□□□□□ -1.94
SWI1YPL016W MRX11Q03079 207 aa2.94□□□□□ -1.94
SWI1YPL016W DAD1Q12248 94 aa2.94□□□□□ -1.94
SWI1YPL016W FHN1P53279 174 aa2.93□□□□□ -1.94
SWI1YPL016W NRM1P53718 249 aa2.93□□□□□ -1.94
SWI1YPL016W RPL7AP05737 244 aaKnown RBP2.93□□□□□ -1.94
SWI1YPL016W MRPL31P14063 131 aaPredicted RBP2.93□□□□□ -1.94
SWI1YPL016W FPR2P32472 135 aa2.93□□□□□ -1.94
SWI1YPL016W PCL5P38794 229 aa2.93□□□□□ -1.94
SWI1YPL016W MST27P53176 234 aa2.93□□□□□ -1.94
SWI1YPL016W ECM12O13529 151 aa2.93□□□□□ -1.94
SWI1YPL016W YHL018WP38744 120 aaPredicted RBP2.93□□□□□ -1.94
SWI1YPL016W RPB11P38902 120 aa2.93□□□□□ -1.94
SWI1YPL016W YPI1P43587 155 aa2.93□□□□□ -1.94
SWI1YPL016W PIR1Q03178 341 aa2.93□□□□□ -1.94
SWI1YPL016W YHP1Q04116 353 aa2.93□□□□□ -1.94
SWI1YPL016W NIP7Q08962 181 aaKnown RBP2.93□□□□□ -1.94
SWI1YPL016W YPL038W-AQ3E7B4 63 aa2.93□□□□□ -1.94
SWI1YPL016W MIG3P39943 394 aa2.92□□□□□ -1.94
SWI1YPL016W YPL073CP40323 161 aa2.92□□□□□ -1.94
SWI1YPL016W YIA6P40556 373 aa2.92□□□□□ -1.94
SWI1YPL016W YJR115WP47152 169 aa2.92□□□□□ -1.94
SWI1YPL016W YBR209WP38311 105 aa2.92□□□□□ -1.94
SWI1YPL016W YOR186WQ08560 144 aa2.92□□□□□ -1.94
SWI1YPL016W PFY1P07274 126 aa2.91□□□□□ -1.94
SWI1YPL016W RPL20AP0CX23 172 aaKnown RBP2.91□□□□□ -1.94
SWI1YPL016W RPL20BP0CX24 172 aaPredicted RBP2.91□□□□□ -1.94
SWI1YPL016W AGA1P32323 725 aa2.91□□□□□ -1.94
SWI1YPL016W YRA2P36036 203 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
SWI1YPL016W COX12Q01519 83 aa2.91□□□□□ -1.94
SWI1YPL016W RPS8AP0CX39 200 aaKnown RBP2.91□□□□□ -1.94
SWI1YPL016W RPS8BP0CX40 200 aaKnown RBP2.91□□□□□ -1.94
SWI1YPL016W IST3P40565 148 aaPredicted RBP2.91□□□□□ -1.94
SWI1YPL016W CUZ1P53899 274 aa2.91□□□□□ -1.94
SWI1YPL016W YPR108W-AQ3E7B3 70 aa2.91□□□□□ -1.94
SWI1YPL016W RPS22AP0C0W1 130 aaKnown RBP2.9□□□□□ -1.94
SWI1YPL016W RPS16AP0CX51 143 aaKnown RBP2.9□□□□□ -1.94
SWI1YPL016W RPS16BP0CX52 143 aaKnown RBP2.9□□□□□ -1.94
SWI1YPL016W SPS100P13130 326 aa2.9□□□□□ -1.94
SWI1YPL016W RRT13P40042 185 aa2.9□□□□□ -1.94
SWI1YPL016W SNP1Q00916 300 aaPredicted RBP2.9□□□□□ -1.94
SWI1YPL016W HPA2Q06592 156 aa2.9□□□□□ -1.94
SWI1YPL016W POL2P21951 2222 aaKnown RBP2.9□□□□□ -1.94
SWI1YPL016W FPR1P20081 114 aaKnown RBP2.9□□□□□ -1.95
SWI1YPL016W PCL2P25693 308 aa2.9□□□□□ -1.95
SWI1YPL016W TIM22Q12328 207 aa2.9□□□□□ -1.95
SWI1YPL016W MIC10Q96VH5 97 aa2.9□□□□□ -1.95
SWI1YPL016W GEP7P53171 287 aa2.9□□□□□ -1.95
SWI1YPL016W YPL261CQ08976 102 aa2.9□□□□□ -1.95
SWI1YPL016W YGR025WP53216 100 aa2.89□□□□□ -1.95
SWI1YPL016W UBC4P15731 148 aa2.89□□□□□ -1.95
SWI1YPL016W ERI1P62651 68 aaKnown RBP2.89□□□□□ -1.95
SWI1YPL016W PPT2Q12036 173 aa2.89□□□□□ -1.95
SWI1YPL016W NCE102Q12207 173 aaRIP-Chip data2.89□□□□□ -1.95not detected
SWI1YPL016W RLM1Q12224 676 aa2.89□□□□□ -1.95
SWI1YPL016W YKL097CP34245 136 aa2.89□□□□□ -1.95
SWI1YPL016W EFM6P53970 246 aa2.89□□□□□ -1.95
SWI1YPL016W SMD1Q02260 146 aaPredicted RBP2.89□□□□□ -1.95
SWI1YPL016W LSM6Q06406 86 aaKnown RBP2.89□□□□□ -1.95
SWI1YPL016W SMT3Q12306 101 aaKnown RBP2.89□□□□□ -1.95
SWI1YPL016W RPS22BQ3E7Y3 130 aaKnown RBP2.89□□□□□ -1.95
SWI1YPL016W HHF1P02309 103 aaKnown RBP2.88□□□□□ -1.95
SWI1YPL016W PEX22P39718 180 aa2.88□□□□□ -1.95
SWI1YPL016W SKI6P46948 246 aaPredicted RBP2.88□□□□□ -1.95
SWI1YPL016W VEL1P53058 206 aa2.88□□□□□ -1.95
SWI1YPL016W YEL045CP32616 141 aa2.88□□□□□ -1.95
SWI1YPL016W YFL015CP43578 164 aa2.88□□□□□ -1.95
SWI1YPL016W PIR5P46999 287 aa2.88□□□□□ -1.95
SWI1YPL016W YOR034C-AQ3E735 80 aa2.88□□□□□ -1.95
SWI1YPL016W YLR365WQ7LIF2 110 aa2.88□□□□□ -1.95
SWI1YPL016W MXR2P25566 168 aa2.87□□□□□ -1.95
SWI1YPL016W MRPS12P53732 153 aa2.87□□□□□ -1.95
SWI1YPL016W FAB1P34756 2278 aa2.87□□□□□ -1.95
SWI1YPL016W AQY1P0CD91 305 aa2.87□□□□□ -1.95
SWI1YPL016W YHL042WP38729 150 aa2.87□□□□□ -1.95
SWI1YPL016W YOR343CQ12484 108 aa2.87□□□□□ -1.95
SWI1YPL016W ARF2P19146 181 aaKnown RBP2.87□□□□□ -1.95
SWI1YPL016W YER187WP40102 141 aa2.87□□□□□ -1.95
SWI1YPL016W YGL118CP53132 145 aa2.87□□□□□ -1.95
SWI1YPL016W YMR181CQ03231 154 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms