RNA–Protein interactions for RNA: YOR042W

CUE5, Transcript of Ubiquitin-binding protein, yeastyeast

Gene CUE5, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUE5YOR042W UPS3Q04006 179 aa3.67□□□□□ -1.82
CUE5YOR042W MSC3Q05812 728 aa3.67□□□□□ -1.82
CUE5YOR042W RPL12AP0CX53 165 aaKnown RBP3.66□□□□□ -1.82
CUE5YOR042W RPL12BP0CX54 165 aa3.66□□□□□ -1.82
CUE5YOR042W IRC22P40006 225 aa3.66□□□□□ -1.82
CUE5YOR042W YFR035CP43608 114 aa3.66□□□□□ -1.82
CUE5YOR042W COX16P47081 118 aa3.66□□□□□ -1.82
CUE5YOR042W YGR017WP53210 297 aa3.66□□□□□ -1.82
CUE5YOR042W CSM4Q08955 156 aa3.66□□□□□ -1.82
CUE5YOR042W VAR1P02381 398 aa3.65□□□□□ -1.83
CUE5YOR042W RPL2AP0CX45 254 aaKnown RBP3.65□□□□□ -1.83
CUE5YOR042W RPL2BP0CX46 254 aaKnown RBP3.65□□□□□ -1.83
CUE5YOR042W AGA1P32323 725 aa3.65□□□□□ -1.83
CUE5YOR042W RPL32P38061 130 aaKnown RBP3.65□□□□□ -1.83
CUE5YOR042W PAU7P39545 55 aa3.65□□□□□ -1.83
CUE5YOR042W TIM22Q12328 207 aa3.65□□□□□ -1.83
CUE5YOR042W POR1P04840 283 aaKnown RBP3.64□□□□□ -1.83
CUE5YOR042W RPS11AP0CX47 156 aaKnown RBP3.64□□□□□ -1.83
CUE5YOR042W RPS11BP0CX48 156 aaKnown RBP3.64□□□□□ -1.83
CUE5YOR042W SUR2P38992 349 aa3.64□□□□□ -1.83
CUE5YOR042W KEG1P43614 200 aa3.64□□□□□ -1.83
CUE5YOR042W SDS23P53172 527 aa3.64□□□□□ -1.83
CUE5YOR042W THG1P53215 237 aaKnown RBP3.64□□□□□ -1.83
CUE5YOR042W COX12Q01519 83 aa3.64□□□□□ -1.83
CUE5YOR042W GPI19Q04082 140 aa3.64□□□□□ -1.83
CUE5YOR042W GTO3Q04806 366 aa3.64□□□□□ -1.83
CUE5YOR042W ARC18Q05933 178 aaKnown RBP3.64□□□□□ -1.83
CUE5YOR042W ZRT1P32804 376 aa3.63□□□□□ -1.83
CUE5YOR042W DIA1P54005 336 aa3.63□□□□□ -1.83
CUE5YOR042W YBR200W-AQ3E755 54 aa3.63□□□□□ -1.83
CUE5YOR042W RPS22BQ3E7Y3 130 aaKnown RBP3.63□□□□□ -1.83
CUE5YOR042W YCR024C-BQ3E7Z8 88 aa3.63□□□□□ -1.83
CUE5YOR042W Q0255P03881 472 aa3.62□□□□□ -1.83
CUE5YOR042W SEC4P07560 215 aaKnown RBP3.62□□□□□ -1.83
CUE5YOR042W RPL27AP0C2H6 136 aaKnown RBP3.62□□□□□ -1.83
CUE5YOR042W RPL23AP0CX41 137 aaKnown RBP3.62□□□□□ -1.83
CUE5YOR042W RPL23BP0CX42 137 aaKnown RBP3.62□□□□□ -1.83
CUE5YOR042W RPL16BP26785 198 aaKnown RBP3.62□□□□□ -1.83
CUE5YOR042W AUA1P32450 94 aa3.62□□□□□ -1.83
CUE5YOR042W NRG2P38082 220 aa3.62□□□□□ -1.83
CUE5YOR042W YHR140WP38842 239 aa3.62□□□□□ -1.83
CUE5YOR042W YGR149WP48236 432 aa3.62□□□□□ -1.83
CUE5YOR042W YDR366CP87287 132 aa3.62□□□□□ -1.83
CUE5YOR042W FSF1Q12029 327 aaKnown RBP3.62□□□□□ -1.83
CUE5YOR042W POM33Q12164 279 aa3.62□□□□□ -1.83
CUE5YOR042W VHS2P40463 436 aa3.61□□□□□ -1.83
CUE5YOR042W BRP1P53194 125 aa3.61□□□□□ -1.83
CUE5YOR042W CYT2Q00873 224 aa3.61□□□□□ -1.83
CUE5YOR042W DXO1Q06349 442 aa3.61□□□□□ -1.83
CUE5YOR042W ATP16Q12165 160 aa3.61□□□□□ -1.83
CUE5YOR042W YRA2P36036 203 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
CUE5YOR042W YKR032WP36127 104 aa3.6□□□□□ -1.83
CUE5YOR042W RRT13P40042 185 aa3.6□□□□□ -1.83
CUE5YOR042W ARL3Q02804 198 aa3.6□□□□□ -1.83
CUE5YOR042W AIM34Q03673 198 aa3.6□□□□□ -1.83
CUE5YOR042W YCR001WP25347 104 aa3.59□□□□□ -1.83
CUE5YOR042W MRPL28P36527 147 aa3.59□□□□□ -1.83
CUE5YOR042W PET8P38921 284 aa3.59□□□□□ -1.83
CUE5YOR042W YCH1P42937 148 aa3.59□□□□□ -1.83
CUE5YOR042W YPS5P53057 165 aa3.59□□□□□ -1.83
CUE5YOR042W SCW10Q04951 389 aa3.59□□□□□ -1.83
CUE5YOR042W RDS3Q06835 107 aaPredicted RBP3.59□□□□□ -1.83
CUE5YOR042W YLR042CQ07990 161 aa3.59□□□□□ -1.83
CUE5YOR042W WIP1Q2V2P8 89 aa3.59□□□□□ -1.83
CUE5YOR042W SEC72P39742 193 aaKnown RBP3.58□□□□□ -1.84
CUE5YOR042W TVP18Q04767 167 aa3.58□□□□□ -1.84
CUE5YOR042W VAM10Q08474 114 aa3.58□□□□□ -1.84
CUE5YOR042W YCR075W-AQ3E830 75 aa3.58□□□□□ -1.84
CUE5YOR042W YCR023CP25351 611 aa3.57□□□□□ -1.84
CUE5YOR042W GSP1P32835 219 aaKnown RBP3.57□□□□□ -1.84
CUE5YOR042W GSP2P32836 220 aaKnown RBP3.57□□□□□ -1.84
CUE5YOR042W YNL217WP40152 326 aa3.57□□□□□ -1.84
CUE5YOR042W YGL118CP53132 145 aa3.57□□□□□ -1.84
CUE5YOR042W SGF11Q03067 99 aa3.57□□□□□ -1.84
CUE5YOR042W KTI12P34253 313 aaKnown RBP3.56□□□□□ -1.84
CUE5YOR042W SSS1P35179 80 aa3.56□□□□□ -1.84
CUE5YOR042W TEM1P38987 245 aa3.56□□□□□ -1.84
CUE5YOR042W KRE9P39005 276 aa3.56□□□□□ -1.84
CUE5YOR042W YER076CP40049 302 aa3.56□□□□□ -1.84
CUE5YOR042W YNL200CP40165 246 aaKnown RBP3.56□□□□□ -1.84
CUE5YOR042W MGR2Q02889 113 aa3.56□□□□□ -1.84
CUE5YOR042W CMC2Q3E7A4 109 aa3.56□□□□□ -1.84
CUE5YOR042W SAL1D6W196 494 aa3.55□□□□□ -1.84
CUE5YOR042W YER134CP40081 178 aa3.55□□□□□ -1.84
CUE5YOR042W CUE4Q04201 117 aaPredicted RBP3.55□□□□□ -1.84
CUE5YOR042W SEN15Q04675 128 aa3.55□□□□□ -1.84
CUE5YOR042W DGA1Q08650 418 aa3.55□□□□□ -1.84
CUE5YOR042W PFY1P07274 126 aa3.54□□□□□ -1.84
CUE5YOR042W DCV1P43595 202 aa3.54□□□□□ -1.84
CUE5YOR042W OST3P48439 350 aa3.54□□□□□ -1.84
CUE5YOR042W HAL1Q01766 294 aa3.54□□□□□ -1.84
CUE5YOR042W YIL014C-AQ02598 104 aa3.54□□□□□ -1.84
CUE5YOR042W YGR240C-AQ3E786 66 aa3.54□□□□□ -1.84
CUE5YOR042W YPR014CQ6B0W2 109 aa3.54□□□□□ -1.84
CUE5YOR042W RPS8AP0CX39 200 aaKnown RBP3.53□□□□□ -1.84
CUE5YOR042W RPS8BP0CX40 200 aaKnown RBP3.53□□□□□ -1.84
CUE5YOR042W PRE1P22141 198 aaKnown RBP3.53□□□□□ -1.84
CUE5YOR042W CDC40P40968 455 aaPredicted RBP3.53□□□□□ -1.84
CUE5YOR042W FCF1Q05498 189 aaPredicted RBP3.53□□□□□ -1.84
CUE5YOR042W YIL134C-AQ45U18 67 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms