RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W YGR017WP53210 297 aa7.45□□□□□ -1.22
PRE6YOL038W THG1P53215 237 aaKnown RBP7.45□□□□□ -1.22
PRE6YOL038W TIM11P81449 96 aaPredicted RBP7.45□□□□□ -1.22
PRE6YOL038W YDR366CP87287 132 aa7.45□□□□□ -1.22
PRE6YOL038W POM33Q12164 279 aa7.45□□□□□ -1.22
PRE6YOL038W CRC1Q12289 327 aa7.45□□□□□ -1.22
PRE6YOL038W YGR240C-AQ3E786 66 aa7.45□□□□□ -1.22
PRE6YOL038W YGR026WP53217 278 aa7.44□□□□□ -1.22
PRE6YOL038W YPR053CQ6Q5F3 151 aa7.44□□□□□ -1.22
PRE6YOL038W YPT53P36019 220 aa7.43□□□□□ -1.22
PRE6YOL038W PAM17P36147 197 aa7.43□□□□□ -1.22
PRE6YOL038W YHR140WP38842 239 aa7.43□□□□□ -1.22
PRE6YOL038W RPL27AP0C2H6 136 aaKnown RBP7.42□□□□□ -1.22
PRE6YOL038W MRPL28P36527 147 aa7.42□□□□□ -1.22
PRE6YOL038W AIM34Q03673 198 aa7.42□□□□□ -1.22
PRE6YOL038W GTO3Q04806 366 aa7.42□□□□□ -1.22
PRE6YOL038W PAU19P0CE85 124 aa7.41□□□□□ -1.22
PRE6YOL038W PAU21P0CE86 164 aa7.41□□□□□ -1.22
PRE6YOL038W PAU22P0CE87 164 aa7.41□□□□□ -1.22
PRE6YOL038W YCR023CP25351 611 aa7.41□□□□□ -1.22
PRE6YOL038W PAU3P25610 124 aa7.41□□□□□ -1.22
PRE6YOL038W YBR013CP38215 129 aa7.41□□□□□ -1.22
PRE6YOL038W YNL200CP40165 246 aaKnown RBP7.41□□□□□ -1.22
PRE6YOL038W YCH1P42937 148 aa7.41□□□□□ -1.22
PRE6YOL038W LCL2Q08045 131 aa7.41□□□□□ -1.22
PRE6YOL038W FRS1P15624 595 aaKnown RBP7.4□□□□□ -1.22
PRE6YOL038W PBA1Q05778 276 aa7.4□□□□□ -1.22
PRE6YOL038W WIP1Q2V2P8 89 aa7.4□□□□□ -1.22
PRE6YOL038W ZRT1P32804 376 aa7.39□□□□□ -1.23
PRE6YOL038W SDS23P53172 527 aa7.39□□□□□ -1.23
PRE6YOL038W GPI19Q04082 140 aa7.39□□□□□ -1.23
PRE6YOL038W YLR042CQ07990 161 aa7.39□□□□□ -1.23
PRE6YOL038W ANB1P19211 157 aa7.38□□□□□ -1.23
PRE6YOL038W SUR2P38992 349 aa7.38□□□□□ -1.23
PRE6YOL038W DPP1Q05521 289 aa7.38□□□□□ -1.23
PRE6YOL038W DXO1Q06349 442 aa7.38□□□□□ -1.23
PRE6YOL038W ATG33Q06485 197 aa7.38□□□□□ -1.23
PRE6YOL038W RPS22BQ3E7Y3 130 aaKnown RBP7.38□□□□□ -1.23
PRE6YOL038W SPC1P46965 94 aa7.37□□□□□ -1.23
PRE6YOL038W TVP18Q04767 167 aa7.37□□□□□ -1.23
PRE6YOL038W RPL23AP0CX41 137 aaKnown RBP7.36□□□□□ -1.23
PRE6YOL038W RPL23BP0CX42 137 aaKnown RBP7.36□□□□□ -1.23
PRE6YOL038W ARC18Q05933 178 aaKnown RBP7.36□□□□□ -1.23
PRE6YOL038W DGA1Q08650 418 aa7.36□□□□□ -1.23
PRE6YOL038W SAL1D6W196 494 aa7.35□□□□□ -1.23
PRE6YOL038W POR1P04840 283 aaKnown RBP7.34□□□□□ -1.23
PRE6YOL038W KTI12P34253 313 aaKnown RBP7.34□□□□□ -1.23
PRE6YOL038W RRT15Q3E811 62 aa7.34□□□□□ -1.23
PRE6YOL038W VTS1Q08831 523 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
PRE6YOL038W FSF1Q12029 327 aaKnown RBP7.33□□□□□ -1.24
PRE6YOL038W TEM1P38987 245 aa7.32□□□□□ -1.24
PRE6YOL038W CDC40P40968 455 aaPredicted RBP7.31□□□□□ -1.24
PRE6YOL038W YJL028WP47062 111 aa7.31□□□□□ -1.24
PRE6YOL038W CYT2Q00873 224 aa7.31□□□□□ -1.24
PRE6YOL038W ARL3Q02804 198 aa7.31□□□□□ -1.24
PRE6YOL038W YCR024C-BQ3E7Z8 88 aa7.31□□□□□ -1.24
PRE6YOL038W DIF1O13577 133 aa7.3□□□□□ -1.24
PRE6YOL038W RPL33AP05744 107 aaKnown RBP7.3□□□□□ -1.24
PRE6YOL038W SEC4P07560 215 aaKnown RBP7.3□□□□□ -1.24
PRE6YOL038W RPL42AP0CX27 106 aaKnown RBP7.3□□□□□ -1.24
PRE6YOL038W RPL42BP0CX28 106 aaKnown RBP7.3□□□□□ -1.24
PRE6YOL038W SEC72P39742 193 aaKnown RBP7.3□□□□□ -1.24
PRE6YOL038W RPL33BP41056 107 aaKnown RBP7.3□□□□□ -1.24
PRE6YOL038W YGR149WP48236 432 aa7.3□□□□□ -1.24
PRE6YOL038W RTC6O14464 93 aa7.29□□□□□ -1.24
PRE6YOL038W RPL11AP0C0W9 174 aaKnown RBP7.29□□□□□ -1.24
PRE6YOL038W SDH8P38345 138 aa7.29□□□□□ -1.24
PRE6YOL038W YDR115WQ04598 105 aa7.29□□□□□ -1.24
PRE6YOL038W RPL11BQ3E757 174 aaPredicted RBP7.29□□□□□ -1.24
PRE6YOL038W MRPL33P20084 86 aa7.28□□□□□ -1.24
PRE6YOL038W UBC5P15732 148 aa7.27□□□□□ -1.25
PRE6YOL038W YGL118CP53132 145 aa7.27□□□□□ -1.25
PRE6YOL038W ATP16Q12165 160 aa7.27□□□□□ -1.25
PRE6YOL038W YKR032WP36127 104 aa7.26□□□□□ -1.25
PRE6YOL038W NUP42P49686 430 aaKnown RBP7.26□□□□□ -1.25
PRE6YOL038W PMP3P87284 55 aa7.26□□□□□ -1.25
PRE6YOL038W YPL229WQ99395 206 aa7.26□□□□□ -1.25
PRE6YOL038W DCV1P43595 202 aa7.24□□□□□ -1.25
PRE6YOL038W FCF1Q05498 189 aaPredicted RBP7.24□□□□□ -1.25
PRE6YOL038W YPR014CQ6B0W2 109 aa7.24□□□□□ -1.25
PRE6YOL038W SVP26P38869 228 aa7.23□□□□□ -1.25
PRE6YOL038W HTL1Q9URQ5 78 aa7.23□□□□□ -1.25
PRE6YOL038W PET8P38921 284 aa7.22□□□□□ -1.25
PRE6YOL038W GLO1P50107 326 aa7.22□□□□□ -1.25
PRE6YOL038W YMR122W-AQ3E842 84 aa7.22□□□□□ -1.25
PRE6YOL038W PFY1P07274 126 aa7.21□□□□□ -1.26
PRE6YOL038W SSS1P35179 80 aa7.21□□□□□ -1.26
PRE6YOL038W YKR070WP36151 352 aaKnown RBP7.21□□□□□ -1.26
PRE6YOL038W YER076CP40049 302 aa7.21□□□□□ -1.26
PRE6YOL038W YMR320WQ04897 101 aa7.21□□□□□ -1.26
PRE6YOL038W CMC2Q3E7A4 109 aa7.21□□□□□ -1.26
PRE6YOL038W ERV14P53173 138 aa7.2□□□□□ -1.26
PRE6YOL038W MED7Q08278 222 aa7.2□□□□□ -1.26
PRE6YOL038W ERI1P62651 68 aaKnown RBP7.19□□□□□ -1.26
PRE6YOL038W YIL014C-AQ02598 104 aa7.19□□□□□ -1.26
PRE6YOL038W YER134CP40081 178 aa7.18□□□□□ -1.26
PRE6YOL038W ARC15P40518 154 aaRIP-Chip data7.18□□□□□ -1.26not detected
PRE6YOL038W CUE4Q04201 117 aaPredicted RBP7.18□□□□□ -1.26
PRE6YOL038W MRP10O75012 95 aa7.17□□□□□ -1.26
PRE6YOL038W YDR034C-AP0C289 58 aa7.17□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms