RNA–Protein interactions for RNA: YNR070W

PDR18, Transcript of Putative transporter of the ATP-binding cassette (ABC) family, yeast

Gene PDR18, Length 4,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR18	YNR070W	YER135C	P40082	130 aa		4.89	□□□□□ -1.63
PDR18	YNR070W	RDL1	Q12305	139 aa	Known RBP	4.89	□□□□□ -1.63
PDR18	YNR070W	VMA16	P23968	213 aa		4.89	□□□□□ -1.63
PDR18	YNR070W	VMA11	P32842	164 aa		4.89	□□□□□ -1.63
PDR18	YNR070W	VPS55	P47111	140 aa		4.89	□□□□□ -1.63
PDR18	YNR070W	INO4	P13902	151 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	ATX1	P38636	73 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	HOR7	Q05827	59 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	GPP2	P40106	250 aa	Known RBP	4.88	□□□□□ -1.63
PDR18	YNR070W	YJR096W	P47137	282 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	YGR219W	P53307	113 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	ATP19	P81451	68 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	SLO1	Q3E784	85 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	VAR1	P02381	398 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	TIR1	P10863	254 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	YCR007C	P25354	239 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	YIL012W	P40551	113 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	YNL234W	P53857	426 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	YPR053C	Q6Q5F3	151 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	YCR001W	P25347	104 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	FZF1	P32805	299 aa		4.88	□□□□□ -1.63
PDR18	YNR070W	HYP2	P23301	157 aa	Known RBP	4.87	□□□□□ -1.63
PDR18	YNR070W	MID2	P36027	376 aa		4.87	□□□□□ -1.63
PDR18	YNR070W	MTR2	P34232	184 aa	Known RBP	4.87	□□□□□ -1.63
PDR18	YNR070W	PAU16	P35994	123 aa		4.87	□□□□□ -1.63
PDR18	YNR070W	YMR103C	Q04436	120 aa		4.87	□□□□□ -1.63
PDR18	YNR070W	DGA1	Q08650	418 aa		4.87	□□□□□ -1.63
PDR18	YNR070W	TSC3	Q3E790	80 aa		4.87	□□□□□ -1.63
PDR18	YNR070W	YCR024C-B	Q3E7Z8	88 aa		4.87	□□□□□ -1.63
PDR18	YNR070W	STT4	P37297	1900 aa		4.86	□□□□□ -1.63
PDR18	YNR070W	DDI2	P0CH63	225 aa		4.86	□□□□□ -1.63
PDR18	YNR070W	DDI3	P0CH64	225 aa		4.86	□□□□□ -1.63
PDR18	YNR070W	YCR025C	P25352	136 aa		4.86	□□□□□ -1.63
PDR18	YNR070W	SRP21	P32342	167 aa		4.86	□□□□□ -1.63
PDR18	YNR070W	SCM4	P32564	187 aa		4.86	□□□□□ -1.63
PDR18	YNR070W	AIM34	Q03673	198 aa		4.86	□□□□□ -1.63
PDR18	YNR070W	GAT3	Q07928	141 aa		4.86	□□□□□ -1.63
PDR18	YNR070W	RPL27B	P0C2H7	136 aa	Known RBP	4.86	□□□□□ -1.63
PDR18	YNR070W	YKR070W	P36151	352 aa	Known RBP	4.86	□□□□□ -1.63
PDR18	YNR070W	RPL28	P02406	149 aa	Known RBP	4.86	□□□□□ -1.63
PDR18	YNR070W	RPL15A	P05748	204 aa	Known RBP	4.86	□□□□□ -1.63
PDR18	YNR070W	FPR2	P32472	135 aa		4.86	□□□□□ -1.63
PDR18	YNR070W	YLR122C	Q12312	125 aa		4.86	□□□□□ -1.63
PDR18	YNR070W	YLR342W-A	Q3E810	57 aa		4.86	□□□□□ -1.63
PDR18	YNR070W	DCV1	P43595	202 aa		4.85	□□□□□ -1.63
PDR18	YNR070W	YLR422W	Q06409	1932 aa		4.85	□□□□□ -1.63
PDR18	YNR070W	YHR130C	P38834	111 aa		4.85	□□□□□ -1.63
PDR18	YNR070W	YBR126W-A	Q8TGU7	68 aa		4.85	□□□□□ -1.63
PDR18	YNR070W	QRI5	P32344	111 aa		4.85	□□□□□ -1.63
PDR18	YNR070W	YER076C	P40049	302 aa		4.85	□□□□□ -1.63
PDR18	YNR070W	AGE2	P40529	298 aa		4.85	□□□□□ -1.63
PDR18	YNR070W	HPA2	Q06592	156 aa		4.85	□□□□□ -1.63
PDR18	YNR070W	YOL085C	Q99345	113 aa		4.85	□□□□□ -1.63
PDR18	YNR070W	MIG1	P27705	504 aa		4.84	□□□□□ -1.63
PDR18	YNR070W	YBR144C	P34215	104 aa		4.84	□□□□□ -1.63
PDR18	YNR070W	YOL160W	Q08321	113 aa		4.84	□□□□□ -1.63
PDR18	YNR070W	YDR157W	A0A023PZE8	133 aa		4.84	□□□□□ -1.63
PDR18	YNR070W	YCR022C	P25620	114 aa		4.83	□□□□□ -1.64
PDR18	YNR070W	YGR018C	P53211	109 aa		4.83	□□□□□ -1.64
PDR18	YNR070W	ATP15	P21306	62 aa		4.83	□□□□□ -1.64
PDR18	YNR070W	YNL217W	P40152	326 aa		4.83	□□□□□ -1.64
PDR18	YNR070W	YNL200C	P40165	246 aa	Known RBP	4.83	□□□□□ -1.64
PDR18	YNR070W	RPL43A	P0CX25	92 aa	Known RBP	4.82	□□□□□ -1.64
PDR18	YNR070W	RPL43B	P0CX26	92 aa		4.82	□□□□□ -1.64
PDR18	YNR070W	DSE2	P38844	325 aa		4.82	□□□□□ -1.64
PDR18	YNR070W	MOT3	P54785	490 aa	Known RBP	4.82	□□□□□ -1.64
PDR18	YNR070W	MIX17	Q03667	156 aa		4.82	□□□□□ -1.64
PDR18	YNR070W	YLR194C	Q05777	254 aa		4.82	□□□□□ -1.64
PDR18	YNR070W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
PDR18	YNR070W	RPL2A	P0CX45	254 aa	Known RBP	4.82	□□□□□ -1.64
PDR18	YNR070W	RPL2B	P0CX46	254 aa	Known RBP	4.82	□□□□□ -1.64
PDR18	YNR070W	ARO2	P28777	376 aa	Known RBP	4.81	□□□□□ -1.64
PDR18	YNR070W	MRP49	P32388	137 aa		4.81	□□□□□ -1.64
PDR18	YNR070W	VPS71	Q03433	280 aa		4.81	□□□□□ -1.64
PDR18	YNR070W	PBA1	Q05778	276 aa		4.81	□□□□□ -1.64
PDR18	YNR070W	YLR118C	Q12354	227 aa		4.81	□□□□□ -1.64
PDR18	YNR070W	YJL118W	P47022	219 aa		4.81	□□□□□ -1.64
PDR18	YNR070W	BRP1	P53194	125 aa		4.81	□□□□□ -1.64
PDR18	YNR070W	YGR039W	P53225	103 aa		4.81	□□□□□ -1.64
PDR18	YNR070W	SNA2	P56508	79 aa		4.81	□□□□□ -1.64
PDR18	YNR070W	ERS1	P17261	260 aa		4.81	□□□□□ -1.64
PDR18	YNR070W	PRE1	P22141	198 aa	Known RBP	4.81	□□□□□ -1.64
PDR18	YNR070W	API2	Q04413	109 aa		4.81	□□□□□ -1.64
PDR18	YNR070W	OXA1	P39952	402 aa		4.81	□□□□□ -1.64
PDR18	YNR070W	YGL230C	P53074	147 aa		4.8	□□□□□ -1.64
PDR18	YNR070W	IGO2	Q9P305	131 aa		4.8	□□□□□ -1.64
PDR18	YNR070W	YOR304C-A	O14468	76 aa		4.8	□□□□□ -1.64
PDR18	YNR070W	Q0032	Q9ZZX7	96 aa		4.8	□□□□□ -1.64
PDR18	YNR070W	RPS11A	P0CX47	156 aa	Known RBP	4.79	□□□□□ -1.64
PDR18	YNR070W	RPS11B	P0CX48	156 aa	Known RBP	4.79	□□□□□ -1.64
PDR18	YNR070W	YJL028W	P47062	111 aa		4.79	□□□□□ -1.64
PDR18	YNR070W	YHR139C-A	O13536	103 aa		4.79	□□□□□ -1.64
PDR18	YNR070W	TRP1	P00912	224 aa		4.79	□□□□□ -1.64
PDR18	YNR070W	LCB3	P47013	409 aa		4.79	□□□□□ -1.64
PDR18	YNR070W	SCW10	Q04951	389 aa		4.79	□□□□□ -1.64
PDR18	YNR070W	YPR063C	Q12160	140 aa		4.79	□□□□□ -1.64
PDR18	YNR070W	FIP1	P45976	327 aa		4.79	□□□□□ -1.64
PDR18	YNR070W	IMP2	P46972	177 aa		4.79	□□□□□ -1.64
PDR18	YNR070W	PAU23	Q07987	124 aa		4.79	□□□□□ -1.64
PDR18	YNR070W	PAU17	Q12370	124 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms