RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W ERI1P62651 68 aaKnown RBP5.35□□□□□ -1.55
NUP53YMR153W TVP18Q04767 167 aa5.35□□□□□ -1.55
NUP53YMR153W LCL2Q08045 131 aa5.35□□□□□ -1.55
NUP53YMR153W TY1A-DR3Q12441 440 aa5.35□□□□□ -1.55
NUP53YMR153W ZRT1P32804 376 aa5.34□□□□□ -1.55
NUP53YMR153W MRPS9P38120 278 aa5.34□□□□□ -1.55
NUP53YMR153W PAU7P39545 55 aa5.34□□□□□ -1.55
NUP53YMR153W PAU5P43575 122 aa5.34□□□□□ -1.55
NUP53YMR153W RPL33AP05744 107 aaKnown RBP5.33□□□□□ -1.56
NUP53YMR153W MIX23P38162 196 aa5.33□□□□□ -1.56
NUP53YMR153W RPL33BP41056 107 aaKnown RBP5.33□□□□□ -1.56
NUP53YMR153W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
NUP53YMR153W RRT15Q3E811 62 aa5.33□□□□□ -1.56
NUP53YMR153W DIF1O13577 133 aa5.32□□□□□ -1.56
NUP53YMR153W HMRA1P0CY11 126 aa5.32□□□□□ -1.56
NUP53YMR153W HSP10P38910 106 aa5.32□□□□□ -1.56
NUP53YMR153W APS2Q00381 147 aa5.32□□□□□ -1.56
NUP53YMR153W YNR034W-AQ3E841 98 aa5.32□□□□□ -1.56
NUP53YMR153W RPL42AP0CX27 106 aaKnown RBP5.31□□□□□ -1.56
NUP53YMR153W RPL42BP0CX28 106 aaKnown RBP5.31□□□□□ -1.56
NUP53YMR153W UBC5P15732 148 aa5.31□□□□□ -1.56
NUP53YMR153W NTF2P33331 125 aaKnown RBP5.31□□□□□ -1.56
NUP53YMR153W PAM17P36147 197 aa5.31□□□□□ -1.56
NUP53YMR153W ARC18Q05933 178 aaKnown RBP5.31□□□□□ -1.56
NUP53YMR153W YMR122W-AQ3E842 84 aa5.31□□□□□ -1.56
NUP53YMR153W DAD2P36162 133 aa5.31□□□□□ -1.56
NUP53YMR153W ARC15P40518 154 aaRIP-Chip data5.31□□□□□ -1.56not detected
NUP53YMR153W SDS23P53172 527 aa5.31□□□□□ -1.56
NUP53YMR153W SNU23Q12368 194 aaPredicted RBP5.31□□□□□ -1.56
NUP53YMR153W YPR010C-AA5Z2X5 72 aa5.3□□□□□ -1.56
NUP53YMR153W SAL1D6W196 494 aa5.3□□□□□ -1.56
NUP53YMR153W SDH8P38345 138 aa5.3□□□□□ -1.56
NUP53YMR153W YIL024CP40543 189 aa5.3□□□□□ -1.56
NUP53YMR153W FCF1Q05498 189 aaPredicted RBP5.3□□□□□ -1.56
NUP53YMR153W POM33Q12164 279 aa5.3□□□□□ -1.56
NUP53YMR153W ADH3P07246 375 aaKnown RBP5.29□□□□□ -1.56
NUP53YMR153W YIL059CP40520 121 aa5.29□□□□□ -1.56
NUP53YMR153W DCV1P43595 202 aa5.29□□□□□ -1.56
NUP53YMR153W YMR320WQ04897 101 aa5.29□□□□□ -1.56
NUP53YMR153W YBR209WP38311 105 aa5.28□□□□□ -1.56
NUP53YMR153W YGR149WP48236 432 aa5.28□□□□□ -1.56
NUP53YMR153W YAR023CD6VPM8 179 aa5.27□□□□□ -1.57
NUP53YMR153W NHP6AP11632 93 aaKnown RBP5.27□□□□□ -1.57
NUP53YMR153W YDR115WQ04598 105 aa5.27□□□□□ -1.57
NUP53YMR153W YOP1Q12402 180 aa5.27□□□□□ -1.57
NUP53YMR153W YPL229WQ99395 206 aa5.27□□□□□ -1.57
NUP53YMR153W YDR034C-AP0C289 58 aa5.26□□□□□ -1.57
NUP53YMR153W RPL23AP0CX41 137 aaKnown RBP5.26□□□□□ -1.57
NUP53YMR153W RPL23BP0CX42 137 aaKnown RBP5.26□□□□□ -1.57
NUP53YMR153W YKR032WP36127 104 aa5.26□□□□□ -1.57
NUP53YMR153W YGL088WP53151 121 aa5.26□□□□□ -1.57
NUP53YMR153W MRP10O75012 95 aa5.25□□□□□ -1.57
NUP53YMR153W YBR013CP38215 129 aa5.25□□□□□ -1.57
NUP53YMR153W VMA21P41806 77 aa5.25□□□□□ -1.57
NUP53YMR153W YLR118CQ12354 227 aa5.25□□□□□ -1.57
NUP53YMR153W WIP1Q2V2P8 89 aa5.25□□□□□ -1.57
NUP53YMR153W MRP49P32388 137 aa5.24□□□□□ -1.57
NUP53YMR153W SOH1P38633 127 aa5.23□□□□□ -1.57
NUP53YMR153W FSF1Q12029 327 aaKnown RBP5.23□□□□□ -1.57
NUP53YMR153W ATG8P38182 117 aaRIP-Chip data5.23□□□□□ -1.57not detected
NUP53YMR153W ERG28P40030 148 aa5.23□□□□□ -1.57
NUP53YMR153W PAU15P40585 124 aa5.23□□□□□ -1.57
NUP53YMR153W GLO1P50107 326 aa5.23□□□□□ -1.57
NUP53YMR153W AIM29P36154 155 aa5.22□□□□□ -1.57
NUP53YMR153W PET8P38921 284 aa5.22□□□□□ -1.57
NUP53YMR153W BET5Q03630 159 aa5.22□□□□□ -1.57
NUP53YMR153W ADH2P00331 348 aaKnown RBP5.21□□□□□ -1.58
NUP53YMR153W RPL16AP26784 199 aaKnown RBP5.21□□□□□ -1.58
NUP53YMR153W YKR070WP36151 352 aaKnown RBP5.21□□□□□ -1.58
NUP53YMR153W YER076CP40049 302 aa5.21□□□□□ -1.58
NUP53YMR153W YER085CP40058 173 aa5.21□□□□□ -1.58
NUP53YMR153W MET32Q12041 191 aa5.21□□□□□ -1.58
NUP53YMR153W SEC4P07560 215 aaKnown RBP5.2□□□□□ -1.58
NUP53YMR153W TY1A-LR4P0C2I8 440 aaKnown RBP5.2□□□□□ -1.58
NUP53YMR153W TY1A-DR6P0CX70 440 aa5.2□□□□□ -1.58
NUP53YMR153W TY1A-ER1P0CX71 440 aa5.2□□□□□ -1.58
NUP53YMR153W TY1A-LR2P0CX72 440 aa5.2□□□□□ -1.58
NUP53YMR153W TY1A-PLP0CX73 440 aa5.2□□□□□ -1.58
NUP53YMR153W TY1A-JR1P0CX74 440 aa5.2□□□□□ -1.58
NUP53YMR153W TY1A-LR3P0CX75 440 aa5.2□□□□□ -1.58
NUP53YMR153W TY1A-ML2P0CX76 440 aa5.2□□□□□ -1.58
NUP53YMR153W SEC72P39742 193 aaKnown RBP5.2□□□□□ -1.58
NUP53YMR153W TY1A-GR1Q12085 440 aa5.2□□□□□ -1.58
NUP53YMR153W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.2□□□□□ -1.58
NUP53YMR153W TY1A-OLQ92392 440 aaKnown RBP5.2□□□□□ -1.58
NUP53YMR153W YAL064WP39711 94 aa5.19□□□□□ -1.58
NUP53YMR153W DAN1P47178 298 aa5.19□□□□□ -1.58
NUP53YMR153W YPR014CQ6B0W2 109 aa5.19□□□□□ -1.58
NUP53YMR153W OST3P48439 350 aa5.18□□□□□ -1.58
NUP53YMR153W RPS22BQ3E7Y3 130 aaKnown RBP5.18□□□□□ -1.58
NUP53YMR153W PFY1P07274 126 aa5.17□□□□□ -1.58
NUP53YMR153W CNB1P25296 175 aa5.17□□□□□ -1.58
NUP53YMR153W SNA2P56508 79 aa5.17□□□□□ -1.58
NUP53YMR153W YDR029WQ12111 104 aa5.17□□□□□ -1.58
NUP53YMR153W DFM1Q12743 341 aaKnown RBP5.17□□□□□ -1.58
NUP53YMR153W YCR024C-BQ3E7Z8 88 aa5.17□□□□□ -1.58
NUP53YMR153W YCL021W-AQ96VH3 125 aa5.17□□□□□ -1.58
NUP53YMR153W YJR146WP47174 117 aa5.16□□□□□ -1.58
NUP53YMR153W ENV10Q99382 181 aa5.16□□□□□ -1.58
NUP53YMR153W TRP1P00912 224 aa5.15□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms