RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W YAR029WP39549 74 aa6.03□□□□□ -1.44
CTF3YLR381W PEX22P39718 180 aa6.03□□□□□ -1.44
CTF3YLR381W YNR077CP53758 84 aa6.03□□□□□ -1.44
CTF3YLR381W YDR102CQ03864 110 aa6.03□□□□□ -1.44
CTF3YLR381W GAT3Q07928 141 aa6.03□□□□□ -1.44
CTF3YLR381W BET1P22804 142 aa6.02□□□□□ -1.45
CTF3YLR381W IES6P32617 166 aa6.02□□□□□ -1.45
CTF3YLR381W YDR381C-AQ3E6R5 114 aa6.02□□□□□ -1.45
CTF3YLR381W RPS26AP39938 119 aaKnown RBP6.02□□□□□ -1.45
CTF3YLR381W RPS26BP39939 119 aaKnown RBP6.02□□□□□ -1.45
CTF3YLR381W YEL067CP39978 195 aa6.02□□□□□ -1.45
CTF3YLR381W YFL051CP43552 160 aa6.02□□□□□ -1.45
CTF3YLR381W HAL1Q01766 294 aa6.02□□□□□ -1.45
CTF3YLR381W YPL261CQ08976 102 aa6.02□□□□□ -1.45
CTF3YLR381W RPL42AP0CX27 106 aaKnown RBP6.01□□□□□ -1.45
CTF3YLR381W RPL42BP0CX28 106 aaKnown RBP6.01□□□□□ -1.45
CTF3YLR381W RPS8AP0CX39 200 aaKnown RBP6.01□□□□□ -1.45
CTF3YLR381W RPS8BP0CX40 200 aaKnown RBP6.01□□□□□ -1.45
CTF3YLR381W UBC4P15731 148 aa6.01□□□□□ -1.45
CTF3YLR381W RSM19P53733 91 aaPredicted RBP6.01□□□□□ -1.45
CTF3YLR381W MIX14Q04341 121 aa6.01□□□□□ -1.45
CTF3YLR381W FPR2P32472 135 aa6□□□□□ -1.45
CTF3YLR381W SIM1P40472 476 aa6□□□□□ -1.45
CTF3YLR381W TDA7P53882 636 aaPredicted RBP6□□□□□ -1.45
CTF3YLR381W YNL046WP53956 172 aa6□□□□□ -1.45
CTF3YLR381W IRC23Q08416 157 aa6□□□□□ -1.45
CTF3YLR381W CDC39P25655 2108 aaKnown RBP6□□□□□ -1.45
CTF3YLR381W HSP12P22943 109 aaKnown RBP5.99□□□□□ -1.45
CTF3YLR381W YRA2P36036 203 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
CTF3YLR381W PET8P38921 284 aa5.99□□□□□ -1.45
CTF3YLR381W YIA6P40556 373 aa5.99□□□□□ -1.45
CTF3YLR381W YDR209CQ03480 137 aa5.99□□□□□ -1.45
CTF3YLR381W YLR112WQ12130 139 aa5.99□□□□□ -1.45
CTF3YLR381W EMC6Q12431 108 aa5.99□□□□□ -1.45
CTF3YLR381W RPL18AP0CX49 186 aaKnown RBP5.99□□□□□ -1.45
CTF3YLR381W RPL18BP0CX50 186 aaKnown RBP5.99□□□□□ -1.45
CTF3YLR381W YER187WP40102 141 aa5.99□□□□□ -1.45
CTF3YLR381W PIR1Q03178 341 aa5.99□□□□□ -1.45
CTF3YLR381W YSY6P38374 65 aa5.98□□□□□ -1.45
CTF3YLR381W SWS2P53937 143 aa5.98□□□□□ -1.45
CTF3YLR381W RPL20AP0CX23 172 aaKnown RBP5.98□□□□□ -1.45
CTF3YLR381W RPL20BP0CX24 172 aaPredicted RBP5.98□□□□□ -1.45
CTF3YLR381W RPL32P38061 130 aaKnown RBP5.98□□□□□ -1.45
CTF3YLR381W OST1P41543 476 aaKnown RBP5.98□□□□□ -1.45
CTF3YLR381W NCA3P46955 337 aa5.98□□□□□ -1.45
CTF3YLR381W MOT3P54785 490 aaKnown RBP5.98□□□□□ -1.45
CTF3YLR381W IGO2Q9P305 131 aa5.98□□□□□ -1.45
CTF3YLR381W RPL16BP26785 198 aaKnown RBP5.97□□□□□ -1.45
CTF3YLR381W YFR054CP43622 192 aa5.97□□□□□ -1.45
CTF3YLR381W RRS1Q08746 203 aaKnown RBP5.97□□□□□ -1.45
CTF3YLR381W YDR461C-AQ2V2P7 80 aa5.97□□□□□ -1.45
CTF3YLR381W PFY1P07274 126 aa5.97□□□□□ -1.45
CTF3YLR381W DAT1P13483 248 aaKnown RBP5.97□□□□□ -1.45
CTF3YLR381W SWD3P38123 315 aa5.97□□□□□ -1.45
CTF3YLR381W PCL2P25693 308 aa5.96□□□□□ -1.46
CTF3YLR381W VEL1P53058 206 aa5.96□□□□□ -1.46
CTF3YLR381W HNT2P49775 206 aa5.95□□□□□ -1.46
CTF3YLR381W API2Q04413 109 aa5.95□□□□□ -1.46
CTF3YLR381W FIT2Q08906 153 aa5.95□□□□□ -1.46
CTF3YLR381W TIM22Q12328 207 aa5.95□□□□□ -1.46
CTF3YLR381W YBR126W-AQ8TGU7 68 aa5.95□□□□□ -1.46
CTF3YLR381W YDL022C-AP0C5L6 82 aa5.95□□□□□ -1.46
CTF3YLR381W UBC13P52490 153 aa5.95□□□□□ -1.46
CTF3YLR381W MGR2Q02889 113 aa5.95□□□□□ -1.46
CTF3YLR381W NIP7Q08962 181 aaKnown RBP5.95□□□□□ -1.46
CTF3YLR381W TOM7P53507 60 aa5.94□□□□□ -1.46
CTF3YLR381W YOR343CQ12484 108 aa5.94□□□□□ -1.46
CTF3YLR381W YKR032WP36127 104 aa5.94□□□□□ -1.46
CTF3YLR381W HUA1P40325 198 aa5.94□□□□□ -1.46
CTF3YLR381W CYR1P08678 2026 aaKnown RBP5.94□□□□□ -1.46
CTF3YLR381W YOL118CQ08259 102 aa5.93□□□□□ -1.46
CTF3YLR381W AIM19P40502 157 aa5.93□□□□□ -1.46
CTF3YLR381W YOR387CQ08910 206 aa5.93□□□□□ -1.46
CTF3YLR381W RPL30P14120 105 aaKnown RBP5.92□□□□□ -1.46
CTF3YLR381W VTC1P40046 129 aaRIP-Chip data5.92□□□□□ -1.46not detected
CTF3YLR381W PBA1Q05778 276 aa5.92□□□□□ -1.46
CTF3YLR381W GAT4P40569 121 aa5.91□□□□□ -1.46
CTF3YLR381W RPL11BQ3E757 174 aaPredicted RBP5.91□□□□□ -1.46
CTF3YLR381W YPR053CQ6Q5F3 151 aa5.91□□□□□ -1.46
CTF3YLR381W YGL258W-AQ3E740 77 aa5.91□□□□□ -1.46
CTF3YLR381W SPT4P32914 102 aaPredicted RBP5.9□□□□□ -1.46
CTF3YLR381W CTR2P38865 189 aa5.9□□□□□ -1.46
CTF3YLR381W YFL019CP43576 117 aa5.9□□□□□ -1.46
CTF3YLR381W YOR192C-CQ3E736 78 aa5.9□□□□□ -1.46
CTF3YLR381W MED6P38782 295 aa5.9□□□□□ -1.47
CTF3YLR381W YNL208WP40159 199 aaKnown RBP5.9□□□□□ -1.47
CTF3YLR381W NRM1P53718 249 aa5.9□□□□□ -1.47
CTF3YLR381W YLR194CQ05777 254 aa5.9□□□□□ -1.47
CTF3YLR381W MIC10Q96VH5 97 aa5.9□□□□□ -1.47
CTF3YLR381W ARF2P19146 181 aaKnown RBP5.89□□□□□ -1.47
CTF3YLR381W PIR5P46999 287 aa5.89□□□□□ -1.47
CTF3YLR381W NCE101Q02820 53 aa5.89□□□□□ -1.47
CTF3YLR381W YHP1Q04116 353 aa5.89□□□□□ -1.47
CTF3YLR381W COA3Q3E7B2 85 aa5.89□□□□□ -1.47
CTF3YLR381W LDB16P25587 256 aa5.89□□□□□ -1.47
CTF3YLR381W VHS2P40463 436 aa5.89□□□□□ -1.47
CTF3YLR381W PPT2Q12036 173 aa5.89□□□□□ -1.47
CTF3YLR381W RRT15Q3E811 62 aa5.89□□□□□ -1.47
CTF3YLR381W TDA8Q6B2U8 126 aa5.89□□□□□ -1.47
CTF3YLR381W HMRA2P0CY13 119 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms