RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C YDR102CQ03864 110 aa0.61□□□□□ -2.31
SMD3YLR147C YPR114WQ06107 315 aa0.61□□□□□ -2.31
SMD3YLR147C ATG10Q07879 167 aa0.61□□□□□ -2.31
SMD3YLR147C RPS25BP0C0T4 108 aaKnown RBP0.6□□□□□ -2.31
SMD3YLR147C INO4P13902 151 aa0.6□□□□□ -2.31
SMD3YLR147C YJL218WP40892 196 aaKnown RBP0.6□□□□□ -2.31
SMD3YLR147C YDL241WQ07738 123 aa0.6□□□□□ -2.31
SMD3YLR147C RPS25AQ3E792 108 aaPredicted RBP0.6□□□□□ -2.31
SMD3YLR147C BRR2P32639 2163 aaKnown RBP0.6□□□□□ -2.31
SMD3YLR147C LAA1P39526 2014 aa0.59□□□□□ -2.31
SMD3YLR147C PET54P10834 293 aa0.59□□□□□ -2.31
SMD3YLR147C PHO13P19881 312 aa0.59□□□□□ -2.31
SMD3YLR147C YER181CP40097 107 aa0.59□□□□□ -2.31
SMD3YLR147C CIN5P40917 295 aa0.59□□□□□ -2.31
SMD3YLR147C GEP7P53171 287 aa0.59□□□□□ -2.31
SMD3YLR147C YPD1Q07688 167 aa0.59□□□□□ -2.31
SMD3YLR147C Q0297Q9ZZV8 51 aa0.59□□□□□ -2.31
SMD3YLR147C YGL041W-AP0C5N3 154 aa0.58□□□□□ -2.32
SMD3YLR147C MRS4P23500 304 aa0.58□□□□□ -2.32
SMD3YLR147C SPT14P32363 452 aa0.58□□□□□ -2.32
SMD3YLR147C MRPL24P36525 258 aaPredicted RBP0.58□□□□□ -2.32
SMD3YLR147C YEL014CP39999 101 aa0.58□□□□□ -2.32
SMD3YLR147C FMN1Q03778 218 aa0.58□□□□□ -2.32
SMD3YLR147C PKR1Q03880 122 aaKnown RBP0.58□□□□□ -2.32
SMD3YLR147C RAV2Q03956 351 aa0.58□□□□□ -2.32
SMD3YLR147C RRT7Q07829 113 aa0.58□□□□□ -2.32
SMD3YLR147C RFU1Q08003 200 aa0.58□□□□□ -2.32
SMD3YLR147C HSP150P32478 413 aa0.57□□□□□ -2.32
SMD3YLR147C IPI1P38803 334 aaPredicted RBP0.57□□□□□ -2.32
SMD3YLR147C RCF2P53721 224 aa0.57□□□□□ -2.32
SMD3YLR147C SED1Q01589 338 aa0.57□□□□□ -2.32
SMD3YLR147C EST3Q03096 181 aa0.57□□□□□ -2.32
SMD3YLR147C NMA1Q06178 401 aaKnown RBP0.57□□□□□ -2.32
SMD3YLR147C CMC4Q3E7A9 73 aa0.57□□□□□ -2.32
SMD3YLR147C DDR48P18899 430 aaKnown RBP0.56□□□□□ -2.32
SMD3YLR147C SRP21P32342 167 aa0.56□□□□□ -2.32
SMD3YLR147C ECM31P38122 312 aa0.56□□□□□ -2.32
SMD3YLR147C GLC8P41818 229 aa0.56□□□□□ -2.32
SMD3YLR147C APS3P47064 194 aa0.56□□□□□ -2.32
SMD3YLR147C MOG1P47123 218 aa0.56□□□□□ -2.32
SMD3YLR147C ATP19P81451 68 aa0.56□□□□□ -2.32
SMD3YLR147C IRC19Q07843 230 aa0.56□□□□□ -2.32
SMD3YLR147C VAM10Q08474 114 aa0.56□□□□□ -2.32
SMD3YLR147C YHR213W-BQ8TGK1 99 aa0.56□□□□□ -2.32
SMD3YLR147C HSP12P22943 109 aaKnown RBP0.55□□□□□ -2.32
SMD3YLR147C YBR027CP38220 110 aa0.55□□□□□ -2.32
SMD3YLR147C IPT1P38954 527 aa0.55□□□□□ -2.32
SMD3YLR147C GPI2P46961 280 aa0.55□□□□□ -2.32
SMD3YLR147C YPR153WQ06537 140 aa0.55□□□□□ -2.32
SMD3YLR147C SCS22Q6Q595 175 aa0.55□□□□□ -2.32
SMD3YLR147C RAD50P12753 1312 aa0.55□□□□□ -2.32
SMD3YLR147C HYP2P23301 157 aaKnown RBP0.54□□□□□ -2.32
SMD3YLR147C SUI1P32911 108 aaKnown RBP0.54□□□□□ -2.32
SMD3YLR147C LSM1P47017 172 aaKnown RBP0.54□□□□□ -2.32
SMD3YLR147C HHO1P53551 258 aa0.54□□□□□ -2.32
SMD3YLR147C YDR366CP87287 132 aa0.54□□□□□ -2.32
SMD3YLR147C YMR320WQ04897 101 aa0.54□□□□□ -2.32
SMD3YLR147C NHP6AP11632 93 aaKnown RBP0.53□□□□□ -2.32
SMD3YLR147C YGR201CP42936 225 aa0.53□□□□□ -2.32
SMD3YLR147C RBL2P48606 106 aaKnown RBP0.53□□□□□ -2.32
SMD3YLR147C EMC4P53073 190 aa0.53□□□□□ -2.32
SMD3YLR147C COF1Q03048 143 aaKnown RBP0.53□□□□□ -2.32
SMD3YLR147C GPI11Q06636 219 aa0.53□□□□□ -2.32
SMD3YLR147C YGR035W-AQ45U48 73 aa0.53□□□□□ -2.32
SMD3YLR147C MYO1P08964 1928 aa0.52□□□□□ -2.33
SMD3YLR147C COX5BP00425 151 aa0.52□□□□□ -2.33
SMD3YLR147C GAT4P40569 121 aa0.52□□□□□ -2.33
SMD3YLR147C YGR039WP53225 103 aa0.52□□□□□ -2.33
SMD3YLR147C SPC3Q12133 184 aa0.52□□□□□ -2.33
SMD3YLR147C HUT1Q12520 339 aa0.52□□□□□ -2.33
SMD3YLR147C RIB3Q99258 208 aa0.52□□□□□ -2.33
SMD3YLR147C DDP1Q99321 188 aaKnown RBP0.52□□□□□ -2.33
SMD3YLR147C RPL33AP05744 107 aaKnown RBP0.51□□□□□ -2.33
SMD3YLR147C RPS1BP23248 255 aaKnown RBP0.51□□□□□ -2.33
SMD3YLR147C FYV5P25585 152 aa0.51□□□□□ -2.33
SMD3YLR147C ATG8P38182 117 aaRIP-Chip data0.51□□□□□ -2.33not detected
SMD3YLR147C PRS3P38689 320 aaKnown RBP0.51□□□□□ -2.33
SMD3YLR147C YHR140WP38842 239 aa0.51□□□□□ -2.33
SMD3YLR147C YIL086CP40503 102 aa0.51□□□□□ -2.33
SMD3YLR147C VMA10P48836 114 aaKnown RBP0.51□□□□□ -2.33
SMD3YLR147C DIE2P50076 525 aa0.51□□□□□ -2.33
SMD3YLR147C SPG1P50088 95 aa0.51□□□□□ -2.33
SMD3YLR147C YNL122CP53921 115 aaPredicted RBP0.51□□□□□ -2.33
SMD3YLR147C YCL001W-AP87012 153 aa0.51□□□□□ -2.33
SMD3YLR147C SOM1Q05676 74 aa0.51□□□□□ -2.33
SMD3YLR147C RAF1Q06891 181 aa0.51□□□□□ -2.33
SMD3YLR147C PRM3Q08931 133 aa0.51□□□□□ -2.33
SMD3YLR147C SRL3P36167 246 aa0.5□□□□□ -2.33
SMD3YLR147C CYC2P38909 366 aa0.5□□□□□ -2.33
SMD3YLR147C LSM8P47093 109 aaKnown RBP0.5□□□□□ -2.33
SMD3YLR147C YNL019CP53975 284 aa0.5□□□□□ -2.33
SMD3YLR147C YOR072WQ08486 104 aa0.5□□□□□ -2.33
SMD3YLR147C YOR385WQ08909 290 aa0.5□□□□□ -2.33
SMD3YLR147C YGL014C-AP0C5N1 53 aa0.49□□□□□ -2.33
SMD3YLR147C MRPL44P19956 98 aa0.49□□□□□ -2.33
SMD3YLR147C RPC19P28000 142 aaKnown RBP0.49□□□□□ -2.33
SMD3YLR147C HPM1P40481 377 aa0.49□□□□□ -2.33
SMD3YLR147C SEN15Q04675 128 aa0.49□□□□□ -2.33
SMD3YLR147C YHR213WP0CI67 198 aa0.48□□□□□ -2.33
SMD3YLR147C ANB1P19211 157 aa0.48□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms