RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C SUR2P38992 349 aa3.54□□□□□ -1.84
BUD28YLR062C YNL200CP40165 246 aaKnown RBP3.54□□□□□ -1.84
BUD28YLR062C GIM5Q04493 163 aa3.54□□□□□ -1.84
BUD28YLR062C DGA1Q08650 418 aa3.54□□□□□ -1.84
BUD28YLR062C DCN1Q12395 269 aa3.54□□□□□ -1.84
BUD28YLR062C SRB6P32570 121 aa3.53□□□□□ -1.84
BUD28YLR062C KTI12P34253 313 aaKnown RBP3.53□□□□□ -1.84
BUD28YLR062C YHR140WP38842 239 aa3.53□□□□□ -1.84
BUD28YLR062C MGA1P53050 456 aa3.53□□□□□ -1.84
BUD28YLR062C YGR017WP53210 297 aa3.53□□□□□ -1.84
BUD28YLR062C DPP1Q05521 289 aa3.53□□□□□ -1.84
BUD28YLR062C PBA1Q05778 276 aa3.53□□□□□ -1.84
BUD28YLR062C CSM4Q08955 156 aa3.53□□□□□ -1.84
BUD28YLR062C RPL27AP0C2H6 136 aaKnown RBP3.52□□□□□ -1.85
BUD28YLR062C LAC1P28496 418 aa3.52□□□□□ -1.85
BUD28YLR062C MIX23P38162 196 aa3.52□□□□□ -1.85
BUD28YLR062C YIL024CP40543 189 aa3.52□□□□□ -1.85
BUD28YLR062C CDC40P40968 455 aaPredicted RBP3.52□□□□□ -1.85
BUD28YLR062C YJL028WP47062 111 aa3.52□□□□□ -1.85
BUD28YLR062C GPI19Q04082 140 aa3.52□□□□□ -1.85
BUD28YLR062C ARC18Q05933 178 aaKnown RBP3.52□□□□□ -1.85
BUD28YLR062C DXO1Q06349 442 aa3.52□□□□□ -1.85
BUD28YLR062C RTC6O14464 93 aa3.51□□□□□ -1.85
BUD28YLR062C RPL33AP05744 107 aaKnown RBP3.51□□□□□ -1.85
BUD28YLR062C CUP2P15315 225 aa3.51□□□□□ -1.85
BUD28YLR062C UBC5P15732 148 aa3.51□□□□□ -1.85
BUD28YLR062C ANB1P19211 157 aa3.51□□□□□ -1.85
BUD28YLR062C MRPS9P38120 278 aa3.51□□□□□ -1.85
BUD28YLR062C TEM1P38987 245 aa3.51□□□□□ -1.85
BUD28YLR062C RPL33BP41056 107 aaKnown RBP3.51□□□□□ -1.85
BUD28YLR062C THG1P53215 237 aaKnown RBP3.51□□□□□ -1.85
BUD28YLR062C HMRA1P0CY11 126 aa3.5□□□□□ -1.85
BUD28YLR062C ZRT1P32804 376 aa3.5□□□□□ -1.85
BUD28YLR062C NTF2P33331 125 aaKnown RBP3.5□□□□□ -1.85
BUD28YLR062C HSP10P38910 106 aa3.5□□□□□ -1.85
BUD28YLR062C ERI1P62651 68 aaKnown RBP3.5□□□□□ -1.85
BUD28YLR062C PMP3P87284 55 aa3.5□□□□□ -1.85
BUD28YLR062C LCL2Q08045 131 aa3.5□□□□□ -1.85
BUD28YLR062C YGL010WP25338 174 aa3.49□□□□□ -1.85
BUD28YLR062C SDH8P38345 138 aa3.49□□□□□ -1.85
BUD28YLR062C PAU7P39545 55 aa3.49□□□□□ -1.85
BUD28YLR062C PAU5P43575 122 aa3.49□□□□□ -1.85
BUD28YLR062C YDR115WQ04598 105 aa3.49□□□□□ -1.85
BUD28YLR062C TVP18Q04767 167 aa3.49□□□□□ -1.85
BUD28YLR062C GTO3Q04806 366 aa3.49□□□□□ -1.85
BUD28YLR062C YLR118CQ12354 227 aa3.49□□□□□ -1.85
BUD28YLR062C YOP1Q12402 180 aa3.49□□□□□ -1.85
BUD28YLR062C YNR034W-AQ3E841 98 aa3.49□□□□□ -1.85
BUD28YLR062C YMR122W-AQ3E842 84 aa3.49□□□□□ -1.85
BUD28YLR062C ADH3P07246 375 aaKnown RBP3.48□□□□□ -1.85
BUD28YLR062C RPL42AP0CX27 106 aaKnown RBP3.48□□□□□ -1.85
BUD28YLR062C RPL42BP0CX28 106 aaKnown RBP3.48□□□□□ -1.85
BUD28YLR062C NHP6AP11632 93 aaKnown RBP3.48□□□□□ -1.85
BUD28YLR062C PAM17P36147 197 aa3.48□□□□□ -1.85
BUD28YLR062C APS2Q00381 147 aa3.48□□□□□ -1.85
BUD28YLR062C SNU23Q12368 194 aaPredicted RBP3.48□□□□□ -1.85
BUD28YLR062C RRT15Q3E811 62 aa3.48□□□□□ -1.85
BUD28YLR062C MRP49P32388 137 aa3.47□□□□□ -1.85
BUD28YLR062C YKR032WP36127 104 aa3.47□□□□□ -1.85
BUD28YLR062C SVP26P38869 228 aa3.47□□□□□ -1.85
BUD28YLR062C YGR149WP48236 432 aa3.47□□□□□ -1.85
BUD28YLR062C POM33Q12164 279 aa3.47□□□□□ -1.85
BUD28YLR062C YPL229WQ99395 206 aa3.47□□□□□ -1.85
BUD28YLR062C YPR010C-AA5Z2X5 72 aa3.46□□□□□ -1.86
BUD28YLR062C SAL1D6W196 494 aa3.46□□□□□ -1.86
BUD28YLR062C ARC15P40518 154 aaRIP-Chip data3.46□□□□□ -1.86not detected
BUD28YLR062C DCV1P43595 202 aa3.46□□□□□ -1.86
BUD28YLR062C YMR320WQ04897 101 aa3.46□□□□□ -1.86
BUD28YLR062C RPL23AP0CX41 137 aaKnown RBP3.45□□□□□ -1.86
BUD28YLR062C RPL23BP0CX42 137 aaKnown RBP3.45□□□□□ -1.86
BUD28YLR062C DAD2P36162 133 aa3.45□□□□□ -1.86
BUD28YLR062C PAU15P40585 124 aa3.45□□□□□ -1.86
BUD28YLR062C VMA21P41806 77 aa3.45□□□□□ -1.86
BUD28YLR062C SDS23P53172 527 aa3.45□□□□□ -1.86
BUD28YLR062C FCF1Q05498 189 aaPredicted RBP3.45□□□□□ -1.86
BUD28YLR062C TMA7Q3E764 64 aaKnown RBP3.45□□□□□ -1.86
BUD28YLR062C ATG8P38182 117 aaRIP-Chip data3.44□□□□□ -1.86not detected
BUD28YLR062C YBR013CP38215 129 aa3.44□□□□□ -1.86
BUD28YLR062C PET8P38921 284 aa3.44□□□□□ -1.86
BUD28YLR062C DAN1P47178 298 aa3.44□□□□□ -1.86
BUD28YLR062C BET5Q03630 159 aa3.44□□□□□ -1.86
BUD28YLR062C FSF1Q12029 327 aaKnown RBP3.44□□□□□ -1.86
BUD28YLR062C CNB1P25296 175 aa3.43□□□□□ -1.86
BUD28YLR062C ERG28P40030 148 aa3.43□□□□□ -1.86
BUD28YLR062C YAR023CD6VPM8 179 aa3.42□□□□□ -1.86
BUD28YLR062C YDR034C-AP0C289 58 aa3.42□□□□□ -1.86
BUD28YLR062C RPL16AP26784 199 aaKnown RBP3.42□□□□□ -1.86
BUD28YLR062C YKR070WP36151 352 aaKnown RBP3.42□□□□□ -1.86
BUD28YLR062C YIL059CP40520 121 aa3.42□□□□□ -1.86
BUD28YLR062C GLO1P50107 326 aa3.42□□□□□ -1.86
BUD28YLR062C YCR024C-BQ3E7Z8 88 aa3.42□□□□□ -1.86
BUD28YLR062C PFY1P07274 126 aa3.41□□□□□ -1.86
BUD28YLR062C YBR209WP38311 105 aa3.41□□□□□ -1.86
BUD28YLR062C YER076CP40049 302 aa3.41□□□□□ -1.86
BUD28YLR062C YGL088WP53151 121 aa3.41□□□□□ -1.86
BUD28YLR062C MGR2Q02889 113 aa3.41□□□□□ -1.86
BUD28YLR062C SEC4P07560 215 aaKnown RBP3.4□□□□□ -1.87
BUD28YLR062C YJR146WP47174 117 aa3.4□□□□□ -1.87
BUD28YLR062C WIP1Q2V2P8 89 aa3.4□□□□□ -1.87
BUD28YLR062C RPS22BQ3E7Y3 130 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms