RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W SME1Q12330 94 aaPredicted RBP2.6□□□□□ -1.99
SSL1YLR005W YAR023CD6VPM8 179 aa2.59□□□□□ -2
SSL1YLR005W YJL197C-AP0C5P0 93 aa2.59□□□□□ -2
SSL1YLR005W PAU1P0CE88 120 aa2.59□□□□□ -2
SSL1YLR005W PAU14P0CE89 120 aa2.59□□□□□ -2
SSL1YLR005W PAU6P0CE90 120 aa2.59□□□□□ -2
SSL1YLR005W PAU18P0CE91 120 aa2.59□□□□□ -2
SSL1YLR005W PAU8P0CE92 120 aa2.59□□□□□ -2
SSL1YLR005W PAU11P0CE93 120 aa2.59□□□□□ -2
SSL1YLR005W UBC5P15732 148 aa2.59□□□□□ -2
SSL1YLR005W SEC59P20048 519 aa2.59□□□□□ -2
SSL1YLR005W POF1P25576 258 aa2.59□□□□□ -2
SSL1YLR005W RPL14AP36105 138 aaKnown RBP2.59□□□□□ -2
SSL1YLR005W PAU13P38725 120 aa2.59□□□□□ -2
SSL1YLR005W RPL14BP38754 138 aaKnown RBP2.59□□□□□ -2
SSL1YLR005W YFL067WP43537 175 aa2.59□□□□□ -2
SSL1YLR005W YFR045WP43617 309 aa2.59□□□□□ -2
SSL1YLR005W MOG1P47123 218 aa2.59□□□□□ -2
SSL1YLR005W PAU10Q03050 120 aa2.59□□□□□ -2
SSL1YLR005W ADD37Q03233 198 aa2.59□□□□□ -2
SSL1YLR005W PAU20Q08322 120 aa2.59□□□□□ -2
SSL1YLR005W PPT2Q12036 173 aa2.59□□□□□ -2
SSL1YLR005W PAU9Q3E770 120 aa2.59□□□□□ -2
SSL1YLR005W TIR1P10863 254 aa2.58□□□□□ -2
SSL1YLR005W MRP49P32388 137 aa2.58□□□□□ -2
SSL1YLR005W ERG28P40030 148 aa2.58□□□□□ -2
SSL1YLR005W POG1P40473 351 aa2.58□□□□□ -2
SSL1YLR005W ARC15P40518 154 aaRIP-Chip data2.58□□□□□ -2not detected
SSL1YLR005W YMR320WQ04897 101 aa2.58□□□□□ -2
SSL1YLR005W COX19Q3E731 98 aa2.58□□□□□ -2
SSL1YLR005W RPL16AP26784 199 aaKnown RBP2.57□□□□□ -2
SSL1YLR005W DAD2P36162 133 aa2.57□□□□□ -2
SSL1YLR005W HUA1P40325 198 aa2.57□□□□□ -2
SSL1YLR005W YDR029WQ12111 104 aa2.57□□□□□ -2
SSL1YLR005W RRT15Q3E811 62 aa2.57□□□□□ -2
SSL1YLR005W STF1P01098 86 aa2.56□□□□□ -2
SSL1YLR005W YIL163CP40448 117 aa2.56□□□□□ -2
SSL1YLR005W JAC1P53193 184 aa2.56□□□□□ -2
SSL1YLR005W FCF1Q05498 189 aaPredicted RBP2.56□□□□□ -2
SSL1YLR005W YGL194C-AQ2V2P6 80 aa2.56□□□□□ -2
SSL1YLR005W YLR307C-AQ3E825 87 aa2.56□□□□□ -2
SSL1YLR005W MRPL31P14063 131 aaPredicted RBP2.55□□□□□ -2
SSL1YLR005W YHR140WP38842 239 aa2.55□□□□□ -2
SSL1YLR005W PGD1P40356 397 aa2.55□□□□□ -2
SSL1YLR005W MMS2P53152 137 aa2.55□□□□□ -2
SSL1YLR005W TVP18Q04767 167 aa2.55□□□□□ -2
SSL1YLR005W DXO1Q06349 442 aa2.55□□□□□ -2
SSL1YLR005W CSM4Q08955 156 aa2.55□□□□□ -2
SSL1YLR005W RPL27AP0C2H6 136 aaKnown RBP2.54□□□□□ -2
SSL1YLR005W RIB5P38145 238 aa2.54□□□□□ -2
SSL1YLR005W GPI19Q04082 140 aa2.54□□□□□ -2
SSL1YLR005W GIM5Q04493 163 aa2.54□□□□□ -2
SSL1YLR005W MHR1Q06630 226 aa2.54□□□□□ -2
SSL1YLR005W SMT3Q12306 101 aaKnown RBP2.54□□□□□ -2
SSL1YLR005W SRP21P32342 167 aa2.53□□□□□ -2
SSL1YLR005W FZF1P32805 299 aa2.53□□□□□ -2
SSL1YLR005W RPB11P38902 120 aa2.53□□□□□ -2
SSL1YLR005W PAU7P39545 55 aa2.53□□□□□ -2
SSL1YLR005W PAU5P43575 122 aa2.53□□□□□ -2
SSL1YLR005W OST3P48439 350 aa2.53□□□□□ -2
SSL1YLR005W MSK1P32048 576 aa2.52□□□□□ -2.01
SSL1YLR005W YER076CP40049 302 aa2.52□□□□□ -2.01
SSL1YLR005W YIL059CP40520 121 aa2.52□□□□□ -2.01
SSL1YLR005W CIN5P40917 295 aa2.52□□□□□ -2.01
SSL1YLR005W SNA2P56508 79 aa2.52□□□□□ -2.01
SSL1YLR005W GTO3Q04806 366 aa2.52□□□□□ -2.01
SSL1YLR005W YLR194CQ05777 254 aa2.52□□□□□ -2.01
SSL1YLR005W SNU23Q12368 194 aaPredicted RBP2.52□□□□□ -2.01
SSL1YLR005W ENV10Q99382 181 aa2.52□□□□□ -2.01
SSL1YLR005W HMRA1P0CY11 126 aa2.51□□□□□ -2.01
SSL1YLR005W QRI5P32344 111 aa2.51□□□□□ -2.01
SSL1YLR005W ZRT1P32804 376 aa2.51□□□□□ -2.01
SSL1YLR005W VMA7P39111 118 aa2.51□□□□□ -2.01
SSL1YLR005W YAR029WP39549 74 aa2.51□□□□□ -2.01
SSL1YLR005W SEC72P39742 193 aaKnown RBP2.51□□□□□ -2.01
SSL1YLR005W RPC10P40422 70 aa2.51□□□□□ -2.01
SSL1YLR005W DCV1P43595 202 aa2.51□□□□□ -2.01
SSL1YLR005W THG1P53215 237 aaKnown RBP2.51□□□□□ -2.01
SSL1YLR005W ARC18Q05933 178 aaKnown RBP2.51□□□□□ -2.01
SSL1YLR005W NAT3Q06504 195 aa2.51□□□□□ -2.01
SSL1YLR005W DCN1Q12395 269 aa2.51□□□□□ -2.01
SSL1YLR005W YBL112CQ3E7Y4 105 aa2.51□□□□□ -2.01
SSL1YLR005W YCL001W-BQ96VH2 84 aa2.51□□□□□ -2.01
SSL1YLR005W CPR1P14832 162 aaKnown RBP2.5□□□□□ -2.01
SSL1YLR005W MRPS9P38120 278 aa2.5□□□□□ -2.01
SSL1YLR005W YBR090CP38253 122 aa2.5□□□□□ -2.01
SSL1YLR005W SRP14P38985 146 aa2.5□□□□□ -2.01
SSL1YLR005W AIM19P40502 157 aa2.5□□□□□ -2.01
SSL1YLR005W FMP49A0A023PZB3 126 aa2.49□□□□□ -2.01
SSL1YLR005W PHS1P40857 217 aa2.49□□□□□ -2.01
SSL1YLR005W HIT1P46973 164 aa2.49□□□□□ -2.01
SSL1YLR005W DAD3P69850 94 aa2.49□□□□□ -2.01
SSL1YLR005W POM33Q12164 279 aa2.49□□□□□ -2.01
SSL1YLR005W YGL041C-BQ3E750 60 aa2.49□□□□□ -2.01
SSL1YLR005W YMR175W-AQ3E766 64 aa2.49□□□□□ -2.01
SSL1YLR005W YAL064WP39711 94 aa2.49□□□□□ -2.01
SSL1YLR005W ECM12O13529 151 aa2.48□□□□□ -2.01
SSL1YLR005W ADH2P00331 348 aaKnown RBP2.48□□□□□ -2.01
SSL1YLR005W TRP1P00912 224 aa2.48□□□□□ -2.01
SSL1YLR005W ARO2P28777 376 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms