RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C YLR099W-AQ3E798 87 aa0.57□□□□□ -2.32
RPL40BYKR094C MRPL31P14063 131 aaPredicted RBP0.56□□□□□ -2.32
RPL40BYKR094C SNF11P38956 169 aa0.56□□□□□ -2.32
RPL40BYKR094C HHY1P39982 102 aa0.56□□□□□ -2.32
RPL40BYKR094C FCF2Q12035 217 aaPredicted RBP0.56□□□□□ -2.32
RPL40BYKR094C WIP1Q2V2P8 89 aa0.56□□□□□ -2.32
RPL40BYKR094C YBR013CP38215 129 aa0.55□□□□□ -2.32
RPL40BYKR094C YMR141CP40211 102 aa0.55□□□□□ -2.32
RPL40BYKR094C POR2P40478 281 aa0.55□□□□□ -2.32
RPL40BYKR094C GTT1P40582 234 aa0.55□□□□□ -2.32
RPL40BYKR094C YFR035CP43608 114 aa0.55□□□□□ -2.32
RPL40BYKR094C MIC27P50945 234 aa0.55□□□□□ -2.32
RPL40BYKR094C SPC24Q04477 213 aa0.55□□□□□ -2.32
RPL40BYKR094C RTR2Q12378 196 aa0.55□□□□□ -2.32
RPL40BYKR094C HUG1Q6Q5K6 68 aa0.55□□□□□ -2.32
RPL40BYKR094C OST5Q92316 86 aa0.55□□□□□ -2.32
RPL40BYKR094C SPP41P38904 1435 aa0.55□□□□□ -2.32
RPL40BYKR094C RPL22AP05749 121 aaKnown RBP0.54□□□□□ -2.32
RPL40BYKR094C YER188C-AP0C0V2 99 aa0.54□□□□□ -2.32
RPL40BYKR094C AIM4P38305 123 aaPredicted RBP0.54□□□□□ -2.32
RPL40BYKR094C TDA2P40045 126 aa0.54□□□□□ -2.32
RPL40BYKR094C YIL163CP40448 117 aa0.54□□□□□ -2.32
RPL40BYKR094C MVB12P42939 101 aa0.54□□□□□ -2.32
RPL40BYKR094C ARL3Q02804 198 aa0.54□□□□□ -2.32
RPL40BYKR094C YPL261CQ08976 102 aa0.54□□□□□ -2.32
RPL40BYKR094C OCA6Q12454 224 aa0.54□□□□□ -2.32
RPL40BYKR094C YGL041C-BQ3E750 60 aa0.54□□□□□ -2.32
RPL40BYKR094C YOR376W-AQ3E805 51 aa0.54□□□□□ -2.32
RPL40BYKR094C LAA1P39526 2014 aa0.54□□□□□ -2.32
RPL40BYKR094C TY1B-HO13535 1793 aa0.53□□□□□ -2.32
RPL40BYKR094C EMP24P32803 203 aaKnown RBP0.53□□□□□ -2.32
RPL40BYKR094C YER187WP40102 141 aa0.53□□□□□ -2.32
RPL40BYKR094C YGR164WP53291 111 aa0.53□□□□□ -2.32
RPL40BYKR094C RPL22BP56628 122 aaKnown RBP0.53□□□□□ -2.32
RPL40BYKR094C YMR321CQ04898 105 aa0.53□□□□□ -2.32
RPL40BYKR094C YLR194CQ05777 254 aa0.53□□□□□ -2.32
RPL40BYKR094C SWC7Q06707 132 aa0.53□□□□□ -2.32
RPL40BYKR094C DAD1Q12248 94 aa0.53□□□□□ -2.32
RPL40BYKR094C YLR365WQ7LIF2 110 aa0.53□□□□□ -2.32
RPL40BYKR094C YOR304C-AO14468 76 aa0.52□□□□□ -2.33
RPL40BYKR094C SRX1P36077 127 aa0.52□□□□□ -2.33
RPL40BYKR094C YAR029WP39549 74 aa0.52□□□□□ -2.33
RPL40BYKR094C PAM16P42949 149 aa0.52□□□□□ -2.33
RPL40BYKR094C YCL048W-AQ2V2Q2 79 aa0.52□□□□□ -2.33
RPL40BYKR094C YOR034C-AQ3E735 80 aa0.52□□□□□ -2.33
RPL40BYKR094C YLR363W-AQ3E747 85 aa0.52□□□□□ -2.33
RPL40BYKR094C YGR240C-AQ3E786 66 aa0.52□□□□□ -2.33
RPL40BYKR094C PCC1Q3E833 88 aa0.52□□□□□ -2.33
RPL40BYKR094C RPL43AP0CX25 92 aaKnown RBP0.51□□□□□ -2.33
RPL40BYKR094C RPL43BP0CX26 92 aa0.51□□□□□ -2.33
RPL40BYKR094C YIR020CP40575 100 aa0.51□□□□□ -2.33
RPL40BYKR094C VMA21P41806 77 aa0.51□□□□□ -2.33
RPL40BYKR094C HUR1P45820 110 aa0.51□□□□□ -2.33
RPL40BYKR094C SNN1P48232 102 aa0.51□□□□□ -2.33
RPL40BYKR094C YRF1-6P53819 1859 aa0.51□□□□□ -2.33
RPL40BYKR094C YLR042CQ07990 161 aa0.51□□□□□ -2.33
RPL40BYKR094C ENV10Q99382 181 aa0.51□□□□□ -2.33
RPL40BYKR094C COX23P38824 151 aa0.5□□□□□ -2.33
RPL40BYKR094C YHR130CP38834 111 aa0.5□□□□□ -2.33
RPL40BYKR094C YJR128WP47162 119 aa0.5□□□□□ -2.33
RPL40BYKR094C DNA2P38859 1522 aa0.49□□□□□ -2.33
RPL40BYKR094C URA2P07259 2214 aaKnown RBP0.49□□□□□ -2.33
RPL40BYKR094C TSC11P40061 1430 aa0.49□□□□□ -2.33
RPL40BYKR094C YLR419WQ06698 1435 aaKnown RBP0.49□□□□□ -2.33
RPL40BYKR094C YER039C-AP0CD97 72 aa0.49□□□□□ -2.33
RPL40BYKR094C GNA1P43577 159 aaPredicted RBP0.49□□□□□ -2.33
RPL40BYKR094C VPS55P47111 140 aa0.49□□□□□ -2.33
RPL40BYKR094C PAU12P53343 120 aa0.49□□□□□ -2.33
RPL40BYKR094C SEC7P11075 2009 aaKnown RBP0.48□□□□□ -2.33
RPL40BYKR094C URB1P34241 1764 aaKnown RBP0.48□□□□□ -2.33
RPL40BYKR094C SEC16P48415 2195 aaKnown RBP0.48□□□□□ -2.33
RPL40BYKR094C YEA6P39953 335 aa0.48□□□□□ -2.33
RPL40BYKR094C RGI1P40043 161 aaPredicted RBP0.48□□□□□ -2.33
RPL40BYKR094C CYB5P40312 120 aa0.48□□□□□ -2.33
RPL40BYKR094C RPS12P48589 143 aaKnown RBP0.48□□□□□ -2.33
RPL40BYKR094C RUB1Q03919 77 aa0.48□□□□□ -2.33
RPL40BYKR094C YLR285C-AQ3E771 56 aa0.48□□□□□ -2.33
RPL40BYKR094C YLR307C-AQ3E825 87 aa0.48□□□□□ -2.33
RPL40BYKR094C YOS1Q3E834 85 aa0.48□□□□□ -2.33
RPL40BYKR094C BPT1P14772 1559 aa0.48□□□□□ -2.33
RPL40BYKR094C GEA1P47102 1408 aaPredicted RBP0.47□□□□□ -2.33
RPL40BYKR094C ADK1P07170 222 aaKnown RBP0.47□□□□□ -2.33
RPL40BYKR094C PAU19P0CE85 124 aa0.47□□□□□ -2.33
RPL40BYKR094C YLR157W-EP0CF00 54 aa0.47□□□□□ -2.33
RPL40BYKR094C PAU3P25610 124 aa0.47□□□□□ -2.33
RPL40BYKR094C YBR090CP38253 122 aa0.47□□□□□ -2.33
RPL40BYKR094C YHR138CP38841 114 aaPredicted RBP0.47□□□□□ -2.33
RPL40BYKR094C TY3B-IQ7LHG5 1498 aaKnown RBP0.47□□□□□ -2.33
RPL40BYKR094C LYS2P07702 1392 aa0.46□□□□□ -2.34
RPL40BYKR094C TY4B-HP0C2J7 1802 aa0.46□□□□□ -2.34
RPL40BYKR094C CCW14O13547 238 aa0.46□□□□□ -2.34
RPL40BYKR094C PAU2P32612 120 aa0.46□□□□□ -2.34
RPL40BYKR094C PAU24P38155 120 aa0.46□□□□□ -2.34
RPL40BYKR094C LCL1Q02786 101 aa0.46□□□□□ -2.34
RPL40BYKR094C YMR090WQ04304 227 aaKnown RBP0.46□□□□□ -2.34
RPL40BYKR094C COX19Q3E731 98 aa0.46□□□□□ -2.34
RPL40BYKR094C PRP8P33334 2413 aaKnown RBP0.46□□□□□ -2.34
RPL40BYKR094C BUD4P47136 1447 aa0.46□□□□□ -2.34
RPL40BYKR094C HMRA2P0CY13 119 aa0.45□□□□□ -2.34
RPL40BYKR094C UBC4P15731 148 aa0.45□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms