RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeast

Gene PAM17, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM17	YKR065C	YGL010W	P25338	174 aa		5.41	□□□□□ -1.54
PAM17	YKR065C	PAU7	P39545	55 aa		5.41	□□□□□ -1.54
PAM17	YKR065C	MIG3	P39943	394 aa		5.41	□□□□□ -1.54
PAM17	YKR065C	PAU5	P43575	122 aa		5.41	□□□□□ -1.54
PAM17	YKR065C	DIA1	P54005	336 aa		5.41	□□□□□ -1.54
PAM17	YKR065C	YDR366C	P87287	132 aa		5.41	□□□□□ -1.54
PAM17	YKR065C	YML108W	Q03759	105 aa		5.41	□□□□□ -1.54
PAM17	YKR065C	POM33	Q12164	279 aa		5.41	□□□□□ -1.54
PAM17	YKR065C	TIM22	Q12328	207 aa		5.41	□□□□□ -1.54
PAM17	YKR065C	YMR141C	P40211	102 aa		5.4	□□□□□ -1.54
PAM17	YKR065C	GTT1	P40582	234 aa		5.4	□□□□□ -1.54
PAM17	YKR065C	DAN1	P47178	298 aa		5.4	□□□□□ -1.54
PAM17	YKR065C	YGR026W	P53217	278 aa		5.4	□□□□□ -1.54
PAM17	YKR065C	MRPL31	P14063	131 aa	Predicted RBP	5.39	□□□□□ -1.55
PAM17	YKR065C	YNR034W-A	Q3E841	98 aa		5.39	□□□□□ -1.55
PAM17	YKR065C	RPL27A	P0C2H6	136 aa	Known RBP	5.38	□□□□□ -1.55
PAM17	YKR065C	PAU19	P0CE85	124 aa		5.38	□□□□□ -1.55
PAM17	YKR065C	PAU21	P0CE86	164 aa		5.38	□□□□□ -1.55
PAM17	YKR065C	PAU22	P0CE87	164 aa		5.38	□□□□□ -1.55
PAM17	YKR065C	PAU3	P25610	124 aa		5.38	□□□□□ -1.55
PAM17	YKR065C	MIX23	P38162	196 aa		5.38	□□□□□ -1.55
PAM17	YKR065C	RPB11	P38902	120 aa		5.38	□□□□□ -1.55
PAM17	YKR065C	SUR2	P38992	349 aa		5.38	□□□□□ -1.55
PAM17	YKR065C	HUA1	P40325	198 aa		5.38	□□□□□ -1.55
PAM17	YKR065C	YGR025W	P53216	100 aa		5.38	□□□□□ -1.55
PAM17	YKR065C	Q0255	P03881	472 aa		5.37	□□□□□ -1.55
PAM17	YKR065C	FZF1	P32805	299 aa		5.37	□□□□□ -1.55
PAM17	YKR065C	YHR140W	P38842	239 aa		5.37	□□□□□ -1.55
PAM17	YKR065C	VAM10	Q08474	114 aa		5.37	□□□□□ -1.55
PAM17	YKR065C	DAD2	P36162	133 aa		5.36	□□□□□ -1.55
PAM17	YKR065C	VHS2	P40463	436 aa		5.36	□□□□□ -1.55
PAM17	YKR065C	YFR035C	P43608	114 aa		5.36	□□□□□ -1.55
PAM17	YKR065C	BRP1	P53194	125 aa		5.36	□□□□□ -1.55
PAM17	YKR065C	RPS22B	Q3E7Y3	130 aa	Known RBP	5.36	□□□□□ -1.55
PAM17	YKR065C	CUP2	P15315	225 aa		5.35	□□□□□ -1.55
PAM17	YKR065C	YBR090C	P38253	122 aa		5.35	□□□□□ -1.55
PAM17	YKR065C	THG1	P53215	237 aa	Known RBP	5.35	□□□□□ -1.55
PAM17	YKR065C	SGF11	Q03067	99 aa		5.35	□□□□□ -1.55
PAM17	YKR065C	GPI19	Q04082	140 aa		5.35	□□□□□ -1.55
PAM17	YKR065C	GTO3	Q04806	366 aa		5.35	□□□□□ -1.55
PAM17	YKR065C	YER078W-A	Q3E7A2	54 aa		5.35	□□□□□ -1.55
PAM17	YKR065C	AIM34	Q03673	198 aa		5.34	□□□□□ -1.55
PAM17	YKR065C	ARC18	Q05933	178 aa	Known RBP	5.34	□□□□□ -1.55
PAM17	YKR065C	YBR200W-A	Q3E755	54 aa		5.34	□□□□□ -1.55
PAM17	YKR065C	ZRT1	P32804	376 aa		5.33	□□□□□ -1.56
PAM17	YKR065C	NSE4	P43124	402 aa		5.33	□□□□□ -1.56
PAM17	YKR065C	TVP18	Q04767	167 aa		5.33	□□□□□ -1.56
PAM17	YKR065C	YGR240C-A	Q3E786	66 aa		5.33	□□□□□ -1.56
PAM17	YKR065C	YOL085C	Q99345	113 aa		5.32	□□□□□ -1.56
PAM17	YKR065C	CPR1	P14832	162 aa	Known RBP	5.31	□□□□□ -1.56
PAM17	YKR065C	RPL16B	P26785	198 aa	Known RBP	5.31	□□□□□ -1.56
PAM17	YKR065C	TEM1	P38987	245 aa		5.31	□□□□□ -1.56
PAM17	YKR065C	AUA1	P32450	94 aa		5.3	□□□□□ -1.56
PAM17	YKR065C	PAM17	P36147	197 aa		5.3	□□□□□ -1.56
PAM17	YKR065C	MRPL28	P36527	147 aa		5.3	□□□□□ -1.56
PAM17	YKR065C	NRG2	P38082	220 aa		5.3	□□□□□ -1.56
PAM17	YKR065C	YBR013C	P38215	129 aa		5.3	□□□□□ -1.56
PAM17	YKR065C	RRT13	P40042	185 aa		5.3	□□□□□ -1.56
PAM17	YKR065C	YPS5	P53057	165 aa		5.3	□□□□□ -1.56
PAM17	YKR065C	RPL23A	P0CX41	137 aa	Known RBP	5.29	□□□□□ -1.56
PAM17	YKR065C	RPL23B	P0CX42	137 aa	Known RBP	5.29	□□□□□ -1.56
PAM17	YKR065C	YEL045C	P32616	141 aa		5.29	□□□□□ -1.56
PAM17	YKR065C	YGL118C	P53132	145 aa		5.29	□□□□□ -1.56
PAM17	YKR065C	DUO1	P53168	247 aa	Known RBP	5.29	□□□□□ -1.56
PAM17	YKR065C	YGR017W	P53210	297 aa		5.29	□□□□□ -1.56
PAM17	YKR065C	HAL1	Q01766	294 aa		5.29	□□□□□ -1.56
PAM17	YKR065C	WIP1	Q2V2P8	89 aa		5.29	□□□□□ -1.56
PAM17	YKR065C	CMC2	Q3E7A4	109 aa		5.29	□□□□□ -1.56
PAM17	YKR065C	YCR001W	P25347	104 aa		5.28	□□□□□ -1.56
PAM17	YKR065C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	5.28	□□□□□ -1.56	not detected
PAM17	YKR065C	YGR149W	P48236	432 aa		5.28	□□□□□ -1.56
PAM17	YKR065C	SDS23	P53172	527 aa		5.28	□□□□□ -1.56
PAM17	YKR065C	RDS3	Q06835	107 aa	Predicted RBP	5.28	□□□□□ -1.56
PAM17	YKR065C	ATP16	Q12165	160 aa		5.28	□□□□□ -1.56
PAM17	YKR065C	HTL1	Q9URQ5	78 aa		5.28	□□□□□ -1.56
PAM17	YKR065C	POR1	P04840	283 aa	Known RBP	5.27	□□□□□ -1.57
PAM17	YKR065C	SEC72	P39742	193 aa	Known RBP	5.27	□□□□□ -1.57
PAM17	YKR065C	ERI1	P62651	68 aa	Known RBP	5.27	□□□□□ -1.57
PAM17	YKR065C	DXO1	Q06349	442 aa		5.27	□□□□□ -1.57
PAM17	YKR065C	FSF1	Q12029	327 aa	Known RBP	5.27	□□□□□ -1.57
PAM17	YKR065C	KTI12	P34253	313 aa	Known RBP	5.26	□□□□□ -1.57
PAM17	YKR065C	TIM11	P81449	96 aa	Predicted RBP	5.26	□□□□□ -1.57
PAM17	YKR065C	PMP3	P87284	55 aa		5.26	□□□□□ -1.57
PAM17	YKR065C	CYT2	Q00873	224 aa		5.26	□□□□□ -1.57
PAM17	YKR065C	YLR042C	Q07990	161 aa		5.26	□□□□□ -1.57
PAM17	YKR065C	YNL217W	P40152	326 aa		5.25	□□□□□ -1.57
PAM17	YKR065C	SPC1	P46965	94 aa		5.25	□□□□□ -1.57
PAM17	YKR065C	HHF1	P02309	103 aa	Known RBP	5.24	□□□□□ -1.57
PAM17	YKR065C	SEC4	P07560	215 aa	Known RBP	5.24	□□□□□ -1.57
PAM17	YKR065C	YKR070W	P36151	352 aa	Known RBP	5.24	□□□□□ -1.57
PAM17	YKR065C	PBA1	Q05778	276 aa		5.24	□□□□□ -1.57
PAM17	YKR065C	DGA1	Q08650	418 aa		5.24	□□□□□ -1.57
PAM17	YKR065C	SAL1	D6W196	494 aa		5.23	□□□□□ -1.57
PAM17	YKR065C	YCR023C	P25351	611 aa		5.23	□□□□□ -1.57
PAM17	YKR065C	ERV14	P53173	138 aa		5.23	□□□□□ -1.57
PAM17	YKR065C	ARL3	Q02804	198 aa		5.23	□□□□□ -1.57
PAM17	YKR065C	YCR024C-B	Q3E7Z8	88 aa		5.23	□□□□□ -1.57
PAM17	YKR065C	YPR010C-A	A5Z2X5	72 aa		5.22	□□□□□ -1.57
PAM17	YKR065C	PFY1	P07274	126 aa		5.22	□□□□□ -1.57
PAM17	YKR065C	ARO2	P28777	376 aa	Known RBP	5.22	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms