RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP7YIL156W THG1P53215 237 aaKnown RBP3.45□□□□□ -1.86
UBP7YIL156W MHF1Q3E835 90 aa3.45□□□□□ -1.86
UBP7YIL156W ERV15P38312 142 aa3.44□□□□□ -1.86
UBP7YIL156W GPI11Q06636 219 aa3.44□□□□□ -1.86
UBP7YIL156W YOR385WQ08909 290 aa3.44□□□□□ -1.86
UBP7YIL156W MYO1P08964 1928 aa3.44□□□□□ -1.86
UBP7YIL156W NSE4P43124 402 aa3.44□□□□□ -1.86
UBP7YIL156W BAT2P47176 376 aaKnown RBP3.44□□□□□ -1.86
UBP7YIL156W ATP19P81451 68 aa3.44□□□□□ -1.86
UBP7YIL156W YHR213W-AQ8TGT4 77 aa3.44□□□□□ -1.86
UBP7YIL156W YEL067CP39978 195 aa3.44□□□□□ -1.86
UBP7YIL156W MZM1Q03429 123 aaPredicted RBP3.44□□□□□ -1.86
UBP7YIL156W YPR195CQ06594 109 aa3.44□□□□□ -1.86
UBP7YIL156W KRE1P17260 313 aa3.43□□□□□ -1.86
UBP7YIL156W YAE1P47118 141 aaPredicted RBP3.43□□□□□ -1.86
UBP7YIL156W CUE4Q04201 117 aaPredicted RBP3.43□□□□□ -1.86
UBP7YIL156W HAP2P06774 265 aa3.43□□□□□ -1.86
UBP7YIL156W MSB2P32334 1306 aa3.43□□□□□ -1.86
UBP7YIL156W YBR090CP38253 122 aa3.43□□□□□ -1.86
UBP7YIL156W YJR146WP47174 117 aa3.43□□□□□ -1.86
UBP7YIL156W YBR209WP38311 105 aa3.42□□□□□ -1.86
UBP7YIL156W PAM16P42949 149 aa3.42□□□□□ -1.86
UBP7YIL156W RAD28Q12021 506 aa3.42□□□□□ -1.86
UBP7YIL156W RCE1Q03530 315 aa3.42□□□□□ -1.86
UBP7YIL156W CLB6P32943 380 aa3.42□□□□□ -1.86
UBP7YIL156W YML079WQ03629 201 aa3.42□□□□□ -1.86
UBP7YIL156W YHP1Q04116 353 aa3.42□□□□□ -1.86
UBP7YIL156W TMA19P35691 167 aaKnown RBP3.41□□□□□ -1.86
UBP7YIL156W YGL194C-AQ2V2P6 80 aa3.41□□□□□ -1.86
UBP7YIL156W GNA1P43577 159 aaPredicted RBP3.41□□□□□ -1.86
UBP7YIL156W IRC19Q07843 230 aa3.41□□□□□ -1.86
UBP7YIL156W MHF2Q3E829 80 aa3.41□□□□□ -1.86
UBP7YIL156W MPC1P53157 130 aaKnown RBP3.4□□□□□ -1.86
UBP7YIL156W RDS3Q06835 107 aaPredicted RBP3.4□□□□□ -1.86
UBP7YIL156W UBC5P15732 148 aa3.4□□□□□ -1.87
UBP7YIL156W SOM1Q05676 74 aa3.4□□□□□ -1.87
UBP7YIL156W PEX4P29340 183 aa3.4□□□□□ -1.87
UBP7YIL156W AGA2P32781 87 aa3.4□□□□□ -1.87
UBP7YIL156W PHO88P38264 188 aaPredicted RBP3.4□□□□□ -1.87
UBP7YIL156W SUS1Q6WNK7 96 aa3.4□□□□□ -1.87
UBP7YIL156W SEC11P15367 167 aa3.39□□□□□ -1.87
UBP7YIL156W GTT1P40582 234 aa3.39□□□□□ -1.87
UBP7YIL156W YCR099CP25657 155 aa3.38□□□□□ -1.87
UBP7YIL156W YGR269WP40326 108 aa3.38□□□□□ -1.87
UBP7YIL156W ERG25P53045 309 aa3.38□□□□□ -1.87
UBP7YIL156W YCL001W-AP87012 153 aa3.38□□□□□ -1.87
UBP7YIL156W KEI1Q06346 221 aa3.38□□□□□ -1.87
UBP7YIL156W COX5BP00425 151 aa3.38□□□□□ -1.87
UBP7YIL156W QCR10P37299 77 aa3.38□□□□□ -1.87
UBP7YIL156W YHL018WP38744 120 aaPredicted RBP3.38□□□□□ -1.87
UBP7YIL156W HPA3P39979 161 aa3.38□□□□□ -1.87
UBP7YIL156W KNH1P50112 268 aa3.38□□□□□ -1.87
UBP7YIL156W YPR174CQ06616 221 aaPredicted RBP3.38□□□□□ -1.87
UBP7YIL156W FAS1P07149 2051 aaKnown RBP3.37□□□□□ -1.87
UBP7YIL156W YGR164WP53291 111 aa3.37□□□□□ -1.87
UBP7YIL156W RAF1Q06891 181 aa3.37□□□□□ -1.87
UBP7YIL156W YDR034W-BQ6Q5X2 51 aa3.37□□□□□ -1.87
UBP7YIL156W COX8P04039 78 aa3.37□□□□□ -1.87
UBP7YIL156W HAP3P13434 144 aa3.37□□□□□ -1.87
UBP7YIL156W SEC59P20048 519 aa3.37□□□□□ -1.87
UBP7YIL156W SRB6P32570 121 aa3.37□□□□□ -1.87
UBP7YIL156W AIM18P38884 321 aa3.37□□□□□ -1.87
UBP7YIL156W DAD4P69851 72 aa3.37□□□□□ -1.87
UBP7YIL156W YOL131WQ08270 108 aa3.37□□□□□ -1.87
UBP7YIL156W FYV5P25585 152 aa3.36□□□□□ -1.87
UBP7YIL156W YFR035CP43608 114 aa3.36□□□□□ -1.87
UBP7YIL156W YMR103CQ04436 120 aa3.36□□□□□ -1.87
UBP7YIL156W YKL018C-AQ3E7A7 99 aa3.36□□□□□ -1.87
UBP7YIL156W RPL40AP0CH08 128 aaKnown RBP3.36□□□□□ -1.87
UBP7YIL156W RPL40BP0CH09 128 aaKnown RBP3.36□□□□□ -1.87
UBP7YIL156W HYP2P23301 157 aaKnown RBP3.36□□□□□ -1.87
UBP7YIL156W MRPL15P36523 253 aa3.36□□□□□ -1.87
UBP7YIL156W SVP26P38869 228 aa3.36□□□□□ -1.87
UBP7YIL156W YEA6P39953 335 aa3.36□□□□□ -1.87
UBP7YIL156W CCS1P40202 249 aaKnown RBP3.36□□□□□ -1.87
UBP7YIL156W NHP10Q03435 203 aa3.36□□□□□ -1.87
UBP7YIL156W NMA1Q06178 401 aaKnown RBP3.36□□□□□ -1.87
UBP7YIL156W PCC1Q3E833 88 aa3.36□□□□□ -1.87
UBP7YIL156W POP3P53833 195 aaPredicted RBP3.36□□□□□ -1.87
UBP7YIL156W SCP1Q08873 200 aa3.36□□□□□ -1.87
UBP7YIL156W CUP1-1P0CX80 61 aa3.35□□□□□ -1.87
UBP7YIL156W CUP1-2P0CX81 61 aa3.35□□□□□ -1.87
UBP7YIL156W YKL044WP36092 106 aa3.35□□□□□ -1.87
UBP7YIL156W SPO73P40031 143 aa3.35□□□□□ -1.87
UBP7YIL156W RPL13AQ12690 199 aaPredicted RBP3.35□□□□□ -1.87
UBP7YIL156W YFR010W-AP0C5N0 62 aa3.35□□□□□ -1.87
UBP7YIL156W SNN1P48232 102 aa3.35□□□□□ -1.87
UBP7YIL156W SWC7Q06707 132 aa3.35□□□□□ -1.87
UBP7YIL156W FIT2Q08906 153 aa3.34□□□□□ -1.87
UBP7YIL156W VPS68Q12016 184 aa3.34□□□□□ -1.87
UBP7YIL156W SNF11P38956 169 aa3.34□□□□□ -1.88
UBP7YIL156W YDL157CQ12082 118 aa3.34□□□□□ -1.88
UBP7YIL156W SOD1P00445 154 aaKnown RBP3.33□□□□□ -1.88
UBP7YIL156W SWM2P40342 146 aa3.33□□□□□ -1.88
UBP7YIL156W YHR022CP38763 256 aa3.32□□□□□ -1.88
UBP7YIL156W ERV14P53173 138 aa3.32□□□□□ -1.88
UBP7YIL156W MRPL44P19956 98 aa3.32□□□□□ -1.88
UBP7YIL156W UTR5P32630 166 aa3.32□□□□□ -1.88
UBP7YIL156W SSS1P35179 80 aa3.32□□□□□ -1.88
UBP7YIL156W ELP6Q04868 273 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms