RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W UBC7Q02159 165 aa3.48□□□□□ -1.85
NMD3YHR170W ARL3Q02804 198 aa3.48□□□□□ -1.85
NMD3YHR170W RPL16AP26784 199 aaKnown RBP3.47□□□□□ -1.85
NMD3YHR170W KTI12P34253 313 aaKnown RBP3.47□□□□□ -1.85
NMD3YHR170W MMS2P53152 137 aa3.47□□□□□ -1.85
NMD3YHR170W DPP1Q05521 289 aa3.47□□□□□ -1.85
NMD3YHR170W YOR105WQ08504 108 aa3.47□□□□□ -1.85
NMD3YHR170W POR1P04840 283 aaKnown RBP3.46□□□□□ -1.85
NMD3YHR170W RPS28BP0C0X0 67 aaKnown RBP3.46□□□□□ -1.85
NMD3YHR170W PAU19P0CE85 124 aa3.46□□□□□ -1.85
NMD3YHR170W PAU21P0CE86 164 aa3.46□□□□□ -1.85
NMD3YHR170W PAU22P0CE87 164 aa3.46□□□□□ -1.85
NMD3YHR170W CPT1P17898 393 aa3.46□□□□□ -1.85
NMD3YHR170W PAU3P25610 124 aa3.46□□□□□ -1.85
NMD3YHR170W MIX23P38162 196 aa3.46□□□□□ -1.85
NMD3YHR170W SNF11P38956 169 aa3.46□□□□□ -1.85
NMD3YHR170W AGE2P40529 298 aa3.46□□□□□ -1.85
NMD3YHR170W YPI1P43587 155 aa3.46□□□□□ -1.85
NMD3YHR170W ATP19P81451 68 aa3.46□□□□□ -1.85
NMD3YHR170W ATG39Q06159 398 aa3.46□□□□□ -1.85
NMD3YHR170W YOR097CQ12274 175 aaPredicted RBP3.46□□□□□ -1.85
NMD3YHR170W PRM7Q12459 698 aa3.46□□□□□ -1.85
NMD3YHR170W RPS28AQ3E7X9 67 aaPredicted RBP3.46□□□□□ -1.85
NMD3YHR170W YOR011W-AQ3E807 68 aa3.46□□□□□ -1.85
NMD3YHR170W TIR1P10863 254 aa3.46□□□□□ -1.86
NMD3YHR170W MRPL28P36527 147 aa3.46□□□□□ -1.86
NMD3YHR170W RPA43P46669 326 aa3.46□□□□□ -1.86
NMD3YHR170W SEN15Q04675 128 aa3.46□□□□□ -1.86
NMD3YHR170W DXO1Q06349 442 aa3.46□□□□□ -1.86
NMD3YHR170W DAD1Q12248 94 aa3.46□□□□□ -1.86
NMD3YHR170W TAR1Q8TGM6 124 aa3.46□□□□□ -1.86
NMD3YHR170W RPL23AP0CX41 137 aaKnown RBP3.45□□□□□ -1.86
NMD3YHR170W RPL23BP0CX42 137 aaKnown RBP3.45□□□□□ -1.86
NMD3YHR170W MRPL31P14063 131 aaPredicted RBP3.45□□□□□ -1.86
NMD3YHR170W RPB11P38902 120 aa3.45□□□□□ -1.86
NMD3YHR170W PET8P38921 284 aa3.45□□□□□ -1.86
NMD3YHR170W COX14P39103 70 aa3.45□□□□□ -1.86
NMD3YHR170W PEX22P39718 180 aa3.45□□□□□ -1.86
NMD3YHR170W PRE5P40302 234 aaKnown RBP3.45□□□□□ -1.86
NMD3YHR170W YFR045WP43617 309 aa3.45□□□□□ -1.86
NMD3YHR170W YGR017WP53210 297 aa3.45□□□□□ -1.86
NMD3YHR170W YOL085CQ99345 113 aa3.45□□□□□ -1.86
NMD3YHR170W YHR212W-AP0CX91 67 aa3.44□□□□□ -1.86
NMD3YHR170W MRPL20P22354 195 aaPredicted RBP3.44□□□□□ -1.86
NMD3YHR170W SSS1P35179 80 aa3.44□□□□□ -1.86
NMD3YHR170W IRC22P40006 225 aa3.44□□□□□ -1.86
NMD3YHR170W MRPL49P40858 161 aaPredicted RBP3.44□□□□□ -1.86
NMD3YHR170W SDS23P53172 527 aa3.44□□□□□ -1.86
NMD3YHR170W CYT2Q00873 224 aa3.44□□□□□ -1.86
NMD3YHR170W SEC4P07560 215 aaKnown RBP3.43□□□□□ -1.86
NMD3YHR170W HMRA1P0CY11 126 aa3.43□□□□□ -1.86
NMD3YHR170W TDA4P47153 279 aa3.43□□□□□ -1.86
NMD3YHR170W PRM3Q08931 133 aa3.43□□□□□ -1.86
NMD3YHR170W YER135CP40082 130 aa3.42□□□□□ -1.86
NMD3YHR170W OST3P48439 350 aa3.42□□□□□ -1.86
NMD3YHR170W YLR342W-AQ3E810 57 aa3.42□□□□□ -1.86
NMD3YHR170W YHR022CP38763 256 aa3.42□□□□□ -1.86
NMD3YHR170W SPI1P40092 148 aa3.42□□□□□ -1.86
NMD3YHR170W THG1P53215 237 aaKnown RBP3.42□□□□□ -1.86
NMD3YHR170W YGR035W-AQ45U48 73 aa3.42□□□□□ -1.86
NMD3YHR170W PRY2P36110 329 aa3.41□□□□□ -1.86
NMD3YHR170W ECM33P38248 429 aaKnown RBP3.41□□□□□ -1.86
NMD3YHR170W YER134CP40081 178 aa3.41□□□□□ -1.86
NMD3YHR170W YMR244WQ04018 355 aa3.41□□□□□ -1.86
NMD3YHR170W CUE4Q04201 117 aaPredicted RBP3.41□□□□□ -1.86
NMD3YHR170W FSF1Q12029 327 aaKnown RBP3.41□□□□□ -1.86
NMD3YHR170W YNL146C-AQ3E7Z1 64 aa3.41□□□□□ -1.86
NMD3YHR170W MIG3P39943 394 aa3.4□□□□□ -1.87
NMD3YHR170W YER076CP40049 302 aa3.4□□□□□ -1.87
NMD3YHR170W YFR035CP43608 114 aa3.4□□□□□ -1.87
NMD3YHR170W TIM22Q12328 207 aa3.4□□□□□ -1.87
NMD3YHR170W WIP1Q2V2P8 89 aa3.4□□□□□ -1.87
NMD3YHR170W RPS22BQ3E7Y3 130 aaKnown RBP3.4□□□□□ -1.87
NMD3YHR170W YIL134C-AQ45U18 67 aa3.4□□□□□ -1.87
NMD3YHR170W YKR032WP36127 104 aa3.39□□□□□ -1.87
NMD3YHR170W PAU7P39545 55 aa3.39□□□□□ -1.87
NMD3YHR170W YNL200CP40165 246 aaKnown RBP3.39□□□□□ -1.87
NMD3YHR170W HAC1P41546 238 aa3.39□□□□□ -1.87
NMD3YHR170W YLR281CQ05863 155 aa3.39□□□□□ -1.87
NMD3YHR170W LSO2Q3E772 92 aaKnown RBP3.39□□□□□ -1.87
NMD3YHR170W GSP1P32835 219 aaKnown RBP3.38□□□□□ -1.87
NMD3YHR170W GSP2P32836 220 aaKnown RBP3.38□□□□□ -1.87
NMD3YHR170W YKL102CP34249 101 aa3.38□□□□□ -1.87
NMD3YHR170W ABF2Q02486 183 aa3.38□□□□□ -1.87
NMD3YHR170W UPS3Q04006 179 aa3.38□□□□□ -1.87
NMD3YHR170W GPI19Q04082 140 aa3.38□□□□□ -1.87
NMD3YHR170W CCW12Q12127 133 aa3.38□□□□□ -1.87
NMD3YHR170W MIG1P27705 504 aa3.38□□□□□ -1.87
NMD3YHR170W UTR5P32630 166 aa3.38□□□□□ -1.87
NMD3YHR170W MRPL11P36521 249 aaPredicted RBP3.38□□□□□ -1.87
NMD3YHR170W YHR140WP38842 239 aa3.38□□□□□ -1.87
NMD3YHR170W YJL028WP47062 111 aa3.38□□□□□ -1.87
NMD3YHR170W BRP1P53194 125 aa3.38□□□□□ -1.87
NMD3YHR170W MRPS8Q03799 155 aa3.38□□□□□ -1.87
NMD3YHR170W IGO2Q9P305 131 aa3.38□□□□□ -1.87
NMD3YHR170W VAR1P02381 398 aa3.37□□□□□ -1.87
NMD3YHR170W Q0255P03881 472 aa3.37□□□□□ -1.87
NMD3YHR170W YKR041WP36134 250 aa3.37□□□□□ -1.87
NMD3YHR170W MPC2P38857 129 aa3.37□□□□□ -1.87
NMD3YHR170W GRH1Q04410 372 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms