RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C TVP18Q04767 167 aa-0.16□□□□□ -2.44
CUP1-2YHR055C ERV14P53173 138 aa-0.17□□□□□ -2.44
CUP1-2YHR055C YNL277W-AQ3E7Z0 62 aa-0.18□□□□□ -2.44
CUP1-2YHR055C VPS55P47111 140 aa-0.19□□□□□ -2.44
CUP1-2YHR055C TY4B-HP0C2J7 1802 aa-0.2□□□□□ -2.44
CUP1-2YHR055C SEC59P20048 519 aa-0.2□□□□□ -2.44
CUP1-2YHR055C SEC7P11075 2009 aaKnown RBP-0.21□□□□□ -2.44
CUP1-2YHR055C YJL197C-AP0C5P0 93 aa-0.21□□□□□ -2.44
CUP1-2YHR055C YBR072C-AQ3E794 53 aa-0.21□□□□□ -2.44
CUP1-2YHR055C YPK9Q12697 1472 aa-0.22□□□□□ -2.44
CUP1-2YHR055C YHR173CP38864 112 aa-0.22□□□□□ -2.44
CUP1-2YHR055C URB1P34241 1764 aaKnown RBP-0.24□□□□□ -2.45
CUP1-2YHR055C CSN9Q03981 162 aa-0.24□□□□□ -2.45
CUP1-2YHR055C Q0144Q9ZZW2 109 aa-0.24□□□□□ -2.45
CUP1-2YHR055C YRF1-6P53819 1859 aa-0.24□□□□□ -2.45
CUP1-2YHR055C SLO1Q3E784 85 aa-0.25□□□□□ -2.45
CUP1-2YHR055C TRS20P38334 175 aa-0.26□□□□□ -2.45
CUP1-2YHR055C GIM4P40005 111 aaKnown RBP-0.26□□□□□ -2.45
CUP1-2YHR055C YIL014C-AQ02598 104 aa-0.26□□□□□ -2.45
CUP1-2YHR055C YKL044WP36092 106 aa-0.28□□□□□ -2.45
CUP1-2YHR055C ECM5Q03214 1411 aa-0.29□□□□□ -2.46
CUP1-2YHR055C POL2P21951 2222 aaKnown RBP-0.29□□□□□ -2.46
CUP1-2YHR055C HYM1P32464 399 aa-0.29□□□□□ -2.46
CUP1-2YHR055C CYB5P40312 120 aa-0.29□□□□□ -2.46
CUP1-2YHR055C GAT4P40569 121 aa-0.3□□□□□ -2.46
CUP1-2YHR055C GPI19Q04082 140 aa-0.3□□□□□ -2.46
CUP1-2YHR055C YLR285C-AQ3E771 56 aa-0.3□□□□□ -2.46
CUP1-2YHR055C RPS20P38701 121 aaKnown RBP-0.31□□□□□ -2.46
CUP1-2YHR055C SFT1P43682 97 aa-0.32□□□□□ -2.46
CUP1-2YHR055C MRPS12P53732 153 aa-0.32□□□□□ -2.46
CUP1-2YHR055C YDR278CQ05612 105 aa-0.33□□□□□ -2.46
CUP1-2YHR055C CNL1Q06333 122 aa-0.33□□□□□ -2.46
CUP1-2YHR055C YNL190WP53872 204 aa-0.36□□□□□ -2.47
CUP1-2YHR055C OST5Q92316 86 aa-0.36□□□□□ -2.47
CUP1-2YHR055C SNF11P38956 169 aa-0.37□□□□□ -2.47
CUP1-2YHR055C YLR363W-AQ3E747 85 aa-0.37□□□□□ -2.47
CUP1-2YHR055C COX23P38824 151 aa-0.38□□□□□ -2.47
CUP1-2YHR055C CYC2P38909 366 aa-0.38□□□□□ -2.47
CUP1-2YHR055C SAE3P89114 91 aa-0.38□□□□□ -2.47
CUP1-2YHR055C YOR376W-AQ3E805 51 aa-0.38□□□□□ -2.47
CUP1-2YHR055C PAU12P53343 120 aa-0.39□□□□□ -2.47
CUP1-2YHR055C YPL261CQ08976 102 aa-0.39□□□□□ -2.47
CUP1-2YHR055C RPA12P32529 125 aaKnown RBP-0.4□□□□□ -2.47
CUP1-2YHR055C POP7P38291 140 aa-0.4□□□□□ -2.47
CUP1-2YHR055C FRQ1Q06389 190 aa-0.4□□□□□ -2.47
CUP1-2YHR055C PCC1Q3E833 88 aa-0.4□□□□□ -2.47
CUP1-2YHR055C DNA2P38859 1522 aa-0.4□□□□□ -2.47
CUP1-2YHR055C GCV3P39726 170 aaPredicted RBP-0.41□□□□□ -2.48
CUP1-2YHR055C ADK1P07170 222 aaKnown RBP-0.42□□□□□ -2.48
CUP1-2YHR055C RPL22BP56628 122 aaKnown RBP-0.42□□□□□ -2.48
CUP1-2YHR055C QCR6P00127 147 aa-0.43□□□□□ -2.48
CUP1-2YHR055C ACP1P32463 125 aa-0.43□□□□□ -2.48
CUP1-2YHR055C TIM8P57744 87 aa-0.44□□□□□ -2.48
CUP1-2YHR055C CCW14O13547 238 aa-0.45□□□□□ -2.48
CUP1-2YHR055C YHR130CP38834 111 aa-0.45□□□□□ -2.48
CUP1-2YHR055C YGR042WP53227 271 aa-0.45□□□□□ -2.48
CUP1-2YHR055C YLR361C-AQ3E795 98 aa-0.45□□□□□ -2.48
CUP1-2YHR055C MYO2P19524 1574 aaKnown RBP-0.45□□□□□ -2.48
CUP1-2YHR055C YIL086CP40503 102 aa-0.46□□□□□ -2.48
CUP1-2YHR055C YCL048W-AQ2V2Q2 79 aa-0.46□□□□□ -2.48
CUP1-2YHR055C YIR020CP40575 100 aa-0.47□□□□□ -2.48
CUP1-2YHR055C SNN1P48232 102 aa-0.47□□□□□ -2.48
CUP1-2YHR055C YGL204CP53089 101 aa-0.47□□□□□ -2.48
CUP1-2YHR055C SPC24Q04477 213 aa-0.47□□□□□ -2.48
CUP1-2YHR055C HMRA2P0CY13 119 aa-0.48□□□□□ -2.49
CUP1-2YHR055C SHU1P38751 150 aa-0.48□□□□□ -2.49
CUP1-2YHR055C YLR255CO13574 117 aa-0.49□□□□□ -2.49
CUP1-2YHR055C TDA2P40045 126 aa-0.49□□□□□ -2.49
CUP1-2YHR055C YER187WP40102 141 aa-0.49□□□□□ -2.49
CUP1-2YHR055C NKP2Q06162 153 aa-0.49□□□□□ -2.49
CUP1-2YHR055C ATX1P38636 73 aa-0.5□□□□□ -2.49
CUP1-2YHR055C DAD1Q12248 94 aa-0.52□□□□□ -2.49
CUP1-2YHR055C COX19Q3E731 98 aa-0.52□□□□□ -2.49
CUP1-2YHR055C RIM15P43565 1770 aa-0.52□□□□□ -2.49
CUP1-2YHR055C YBR056W-AI2HB52 66 aa-0.53□□□□□ -2.49
CUP1-2YHR055C PAU24P38155 120 aa-0.54□□□□□ -2.5
CUP1-2YHR055C MRP49P32388 137 aa-0.56□□□□□ -2.5
CUP1-2YHR055C TOP2P06786 1428 aaKnown RBP-0.56□□□□□ -2.5
CUP1-2YHR055C RPO41P13433 1351 aaKnown RBP-0.57□□□□□ -2.5
CUP1-2YHR055C YCR099CP25657 155 aa-0.57□□□□□ -2.5
CUP1-2YHR055C IMP2P46972 177 aa-0.57□□□□□ -2.5
CUP1-2YHR055C PAU2P32612 120 aa-0.58□□□□□ -2.5
CUP1-2YHR055C MPC2P38857 129 aa-0.58□□□□□ -2.5
CUP1-2YHR055C GTT1P40582 234 aa-0.58□□□□□ -2.5
CUP1-2YHR055C DYN2Q02647 92 aa-0.58□□□□□ -2.5
CUP1-2YHR055C RUB1Q03919 77 aa-0.58□□□□□ -2.5
CUP1-2YHR055C LSM6Q06406 86 aaKnown RBP-0.58□□□□□ -2.5
CUP1-2YHR055C RAD50P12753 1312 aa-0.59□□□□□ -2.5
CUP1-2YHR055C AIM11P87275 137 aa-0.59□□□□□ -2.5
CUP1-2YHR055C RPB11P38902 120 aa-0.6□□□□□ -2.51
CUP1-2YHR055C YLR118CQ12354 227 aa-0.6□□□□□ -2.51
CUP1-2YHR055C YOL118CQ08259 102 aa-0.61□□□□□ -2.51
CUP1-2YHR055C PAU19P0CE85 124 aa-0.62□□□□□ -2.51
CUP1-2YHR055C RPS11AP0CX47 156 aaKnown RBP-0.62□□□□□ -2.51
CUP1-2YHR055C RPS11BP0CX48 156 aaKnown RBP-0.62□□□□□ -2.51
CUP1-2YHR055C PAU3P25610 124 aa-0.62□□□□□ -2.51
CUP1-2YHR055C YOR097CQ12274 175 aaPredicted RBP-0.62□□□□□ -2.51
CUP1-2YHR055C YDR210WQ03482 75 aa-0.65□□□□□ -2.51
CUP1-2YHR055C YLR365WQ7LIF2 110 aa-0.66□□□□□ -2.52
CUP1-2YHR055C VMA7P39111 118 aa-0.67□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms