RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C MIX17Q03667 156 aa2.27□□□□□ -2.05
MSM1YGR171C NMA1Q06178 401 aaKnown RBP2.27□□□□□ -2.05
MSM1YGR171C PRM3Q08931 133 aa2.27□□□□□ -2.05
MSM1YGR171C YMR030W-AQ3E760 96 aa2.27□□□□□ -2.05
MSM1YGR171C MMS22Q06164 1454 aa2.27□□□□□ -2.05
MSM1YGR171C TY3B-IQ7LHG5 1498 aaKnown RBP2.27□□□□□ -2.05
MSM1YGR171C DUR1,2P32528 1835 aaKnown RBP2.27□□□□□ -2.05
MSM1YGR171C YRF1-3P0CX14 1859 aa2.26□□□□□ -2.05
MSM1YGR171C YRF1-7P0CX15 1859 aa2.26□□□□□ -2.05
MSM1YGR171C SWM2P40342 146 aa2.26□□□□□ -2.05
MSM1YGR171C YRF1-6P53819 1859 aa2.26□□□□□ -2.05
MSM1YGR171C YOL131WQ08270 108 aa2.26□□□□□ -2.05
MSM1YGR171C ROM2P51862 1356 aaKnown RBP2.25□□□□□ -2.05
MSM1YGR171C MSB2P32334 1306 aa2.25□□□□□ -2.05
MSM1YGR171C YCR085WP25650 117 aa2.25□□□□□ -2.05
MSM1YGR171C YHL042WP38729 150 aa2.25□□□□□ -2.05
MSM1YGR171C YHL018WP38744 120 aaPredicted RBP2.25□□□□□ -2.05
MSM1YGR171C SNF11P38956 169 aa2.25□□□□□ -2.05
MSM1YGR171C YJL027CP47063 138 aaPredicted RBP2.25□□□□□ -2.05
MSM1YGR171C KNH1P50112 268 aa2.25□□□□□ -2.05
MSM1YGR171C MZM1Q03429 123 aaPredicted RBP2.25□□□□□ -2.05
MSM1YGR171C GPI19Q04082 140 aa2.25□□□□□ -2.05
MSM1YGR171C MHF1Q3E835 90 aa2.25□□□□□ -2.05
MSM1YGR171C TY1B-GR3Q12316 1755 aa2.25□□□□□ -2.05
MSM1YGR171C TY1B-ORQ92393 1755 aa2.25□□□□□ -2.05
MSM1YGR171C YRF1-2P40105 1681 aa2.25□□□□□ -2.05
MSM1YGR171C NUP170P38181 1502 aa2.25□□□□□ -2.05
MSM1YGR171C UBR1P19812 1950 aa2.25□□□□□ -2.05
MSM1YGR171C UTR5P32630 166 aa2.25□□□□□ -2.05
MSM1YGR171C YKL044WP36092 106 aa2.25□□□□□ -2.05
MSM1YGR171C NRG2P38082 220 aa2.25□□□□□ -2.05
MSM1YGR171C YHR022CP38763 256 aa2.25□□□□□ -2.05
MSM1YGR171C YEL067CP39978 195 aa2.25□□□□□ -2.05
MSM1YGR171C POP3P53833 195 aaPredicted RBP2.25□□□□□ -2.05
MSM1YGR171C YHR007C-AQ07074 71 aa2.25□□□□□ -2.05
MSM1YGR171C YOR385WQ08909 290 aa2.25□□□□□ -2.05
MSM1YGR171C YLR365WQ7LIF2 110 aa2.25□□□□□ -2.05
MSM1YGR171C TY2B-LR1P0C2J3 1770 aa2.25□□□□□ -2.05
MSM1YGR171C TY2B-FP0CX63 1770 aa2.25□□□□□ -2.05
MSM1YGR171C TY2B-GR2P0CX64 1770 aa2.25□□□□□ -2.05
MSM1YGR171C TY2B-CP25384 1770 aa2.25□□□□□ -2.05
MSM1YGR171C TY2B-DR2Q03494 1770 aa2.25□□□□□ -2.05
MSM1YGR171C TY2B-DR3Q07791 1770 aaKnown RBP2.25□□□□□ -2.05
MSM1YGR171C TY2B-OR1Q12113 1770 aa2.25□□□□□ -2.05
MSM1YGR171C TY2B-DR1Q12472 1770 aa2.25□□□□□ -2.05
MSM1YGR171C TY2B-BQ12491 1770 aa2.25□□□□□ -2.05
MSM1YGR171C TY2B-OR2Q12501 1770 aa2.25□□□□□ -2.05
MSM1YGR171C RPS25BP0C0T4 108 aaKnown RBP2.24□□□□□ -2.05
MSM1YGR171C SOM1Q05676 74 aa2.24□□□□□ -2.05
MSM1YGR171C IRC19Q07843 230 aa2.24□□□□□ -2.05
MSM1YGR171C POC4Q12245 148 aaPredicted RBP2.24□□□□□ -2.05
MSM1YGR171C RPS25AQ3E792 108 aaPredicted RBP2.24□□□□□ -2.05
MSM1YGR171C YLR422WQ06409 1932 aa2.23□□□□□ -2.05
MSM1YGR171C COX8P04039 78 aa2.23□□□□□ -2.05
MSM1YGR171C CYT2Q00873 224 aa2.23□□□□□ -2.05
MSM1YGR171C MIX14Q04341 121 aa2.23□□□□□ -2.05
MSM1YGR171C ELP6Q04868 273 aa2.23□□□□□ -2.05
MSM1YGR171C YLR296WQ05898 108 aa2.23□□□□□ -2.05
MSM1YGR171C NAT5Q08689 176 aa2.23□□□□□ -2.05
MSM1YGR171C RRT15Q3E811 62 aa2.23□□□□□ -2.05
MSM1YGR171C YIL134C-AQ45U18 67 aa2.23□□□□□ -2.05
MSM1YGR171C RPA12P32529 125 aaKnown RBP2.22□□□□□ -2.05
MSM1YGR171C QCR10P37299 77 aa2.22□□□□□ -2.05
MSM1YGR171C DSE2P38844 325 aa2.22□□□□□ -2.05
MSM1YGR171C HYR1P40581 163 aaKnown RBP2.22□□□□□ -2.05
MSM1YGR171C YDR042CQ03205 200 aa2.22□□□□□ -2.05
MSM1YGR171C YDL241WQ07738 123 aa2.22□□□□□ -2.05
MSM1YGR171C ENV10Q99382 181 aa2.22□□□□□ -2.05
MSM1YGR171C POL1P13382 1468 aa2.22□□□□□ -2.05
MSM1YGR171C TY1B-JR2P47100 1755 aaKnown RBP2.22□□□□□ -2.05
MSM1YGR171C TY1B-ER2Q03619 1755 aa2.22□□□□□ -2.05
MSM1YGR171C TY1B-MR1Q04214 1755 aa2.22□□□□□ -2.05
MSM1YGR171C TY1B-MR2Q04670 1755 aaKnown RBP2.22□□□□□ -2.05
MSM1YGR171C TY1B-LR1Q12088 1755 aaKnown RBP2.22□□□□□ -2.05
MSM1YGR171C TY1B-NL1Q12112 1755 aa2.22□□□□□ -2.05
MSM1YGR171C TY1B-GR1Q12141 1755 aa2.22□□□□□ -2.05
MSM1YGR171C TY1B-BLQ12490 1755 aa2.22□□□□□ -2.05
MSM1YGR171C YHR138CP38841 114 aaPredicted RBP2.22□□□□□ -2.05
MSM1YGR171C PEP8P40335 379 aa2.22□□□□□ -2.05
MSM1YGR171C RSM19P53733 91 aaPredicted RBP2.22□□□□□ -2.05
MSM1YGR171C YPR153WQ06537 140 aa2.22□□□□□ -2.05
MSM1YGR171C PAU23Q07987 124 aa2.22□□□□□ -2.05
MSM1YGR171C PAU17Q12370 124 aa2.22□□□□□ -2.05
MSM1YGR171C PCC1Q3E833 88 aa2.22□□□□□ -2.05
MSM1YGR171C YNR034W-AQ3E841 98 aa2.22□□□□□ -2.05
MSM1YGR171C SUS1Q6WNK7 96 aa2.22□□□□□ -2.05
MSM1YGR171C FAS2P19097 1887 aaKnown RBP2.21□□□□□ -2.06
MSM1YGR171C FYV5P25585 152 aa2.21□□□□□ -2.06
MSM1YGR171C ATX1P38636 73 aa2.21□□□□□ -2.06
MSM1YGR171C HUR1P45820 110 aa2.21□□□□□ -2.06
MSM1YGR171C DAD1Q12248 94 aa2.21□□□□□ -2.06
MSM1YGR171C YLR363W-AQ3E747 85 aa2.21□□□□□ -2.06
MSM1YGR171C BPT1P14772 1559 aa2.21□□□□□ -2.06
MSM1YGR171C SNQ2P32568 1501 aaKnown RBP2.21□□□□□ -2.06
MSM1YGR171C YKR045CP36138 183 aa2.2□□□□□ -2.06
MSM1YGR171C HSP10P38910 106 aa2.2□□□□□ -2.06
MSM1YGR171C YMR175W-AQ3E766 64 aa2.2□□□□□ -2.06
MSM1YGR171C STU1P38198 1513 aa2.2□□□□□ -2.06
MSM1YGR171C VMA21P41806 77 aa2.2□□□□□ -2.06
MSM1YGR171C YDR119W-AQ2V2P9 66 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 66.2 ms