RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W YLR042CQ07990 161 aa3.6□□□□□ -1.83
RPN12YFR052W CSM4Q08955 156 aa3.6□□□□□ -1.83
RPN12YFR052W YBR126W-AQ8TGU7 68 aa3.6□□□□□ -1.83
RPN12YFR052W ADH3P07246 375 aaKnown RBP3.59□□□□□ -1.83
RPN12YFR052W AQY1P0CD91 305 aa3.59□□□□□ -1.83
RPN12YFR052W RPL12AP0CX53 165 aaKnown RBP3.59□□□□□ -1.83
RPN12YFR052W RPL12BP0CX54 165 aa3.59□□□□□ -1.83
RPN12YFR052W YCR023CP25351 611 aa3.59□□□□□ -1.83
RPN12YFR052W DAD2P36162 133 aa3.59□□□□□ -1.83
RPN12YFR052W COX16P47081 118 aa3.59□□□□□ -1.83
RPN12YFR052W TIM21P53220 239 aa3.59□□□□□ -1.83
RPN12YFR052W CRC1Q12289 327 aa3.59□□□□□ -1.83
RPN12YFR052W YNR034W-AQ3E841 98 aa3.59□□□□□ -1.83
RPN12YFR052W ZRT1P32804 376 aa3.58□□□□□ -1.84
RPN12YFR052W HOT13P36078 116 aa3.58□□□□□ -1.84
RPN12YFR052W ATG8P38182 117 aaRIP-Chip data3.58□□□□□ -1.84not detected
RPN12YFR052W SDH8P38345 138 aa3.58□□□□□ -1.84
RPN12YFR052W YHR140WP38842 239 aa3.58□□□□□ -1.84
RPN12YFR052W SDS23P53172 527 aa3.58□□□□□ -1.84
RPN12YFR052W GPI19Q04082 140 aa3.58□□□□□ -1.84
RPN12YFR052W GTO3Q04806 366 aa3.58□□□□□ -1.84
RPN12YFR052W YPR195CQ06594 109 aa3.58□□□□□ -1.84
RPN12YFR052W DGA1Q08650 418 aa3.58□□□□□ -1.84
RPN12YFR052W SNU23Q12368 194 aaPredicted RBP3.58□□□□□ -1.84
RPN12YFR052W YGR240C-AQ3E786 66 aa3.58□□□□□ -1.84
RPN12YFR052W CNB1P25296 175 aa3.57□□□□□ -1.84
RPN12YFR052W HSP10P38910 106 aa3.57□□□□□ -1.84
RPN12YFR052W SUR2P38992 349 aa3.57□□□□□ -1.84
RPN12YFR052W YCH1P42937 148 aa3.57□□□□□ -1.84
RPN12YFR052W MGA1P53050 456 aa3.57□□□□□ -1.84
RPN12YFR052W APS2Q00381 147 aa3.57□□□□□ -1.84
RPN12YFR052W ARC18Q05933 178 aaKnown RBP3.57□□□□□ -1.84
RPN12YFR052W YLR118CQ12354 227 aa3.57□□□□□ -1.84
RPN12YFR052W RPL27AP0C2H6 136 aaKnown RBP3.56□□□□□ -1.84
RPN12YFR052W HMRA1P0CY11 126 aa3.56□□□□□ -1.84
RPN12YFR052W NHP6AP11632 93 aaKnown RBP3.56□□□□□ -1.84
RPN12YFR052W KTI12P34253 313 aaKnown RBP3.56□□□□□ -1.84
RPN12YFR052W YKR032WP36127 104 aa3.56□□□□□ -1.84
RPN12YFR052W PAU7P39545 55 aa3.56□□□□□ -1.84
RPN12YFR052W PAU5P43575 122 aa3.56□□□□□ -1.84
RPN12YFR052W DAN1P47178 298 aa3.56□□□□□ -1.84
RPN12YFR052W YOP1Q12402 180 aa3.56□□□□□ -1.84
RPN12YFR052W YBR013CP38215 129 aa3.55□□□□□ -1.84
RPN12YFR052W IRC22P40006 225 aa3.55□□□□□ -1.84
RPN12YFR052W PAU15P40585 124 aa3.55□□□□□ -1.84
RPN12YFR052W NSE4P43124 402 aa3.55□□□□□ -1.84
RPN12YFR052W TVP18Q04767 167 aa3.55□□□□□ -1.84
RPN12YFR052W DPP1Q05521 289 aa3.55□□□□□ -1.84
RPN12YFR052W RPL23AP0CX41 137 aaKnown RBP3.54□□□□□ -1.84
RPN12YFR052W RPL23BP0CX42 137 aaKnown RBP3.54□□□□□ -1.84
RPN12YFR052W PET8P38921 284 aa3.54□□□□□ -1.84
RPN12YFR052W CDC40P40968 455 aaPredicted RBP3.54□□□□□ -1.84
RPN12YFR052W PBA1Q05778 276 aa3.54□□□□□ -1.84
RPN12YFR052W ORM2Q06144 216 aa3.54□□□□□ -1.84
RPN12YFR052W FSF1Q12029 327 aaKnown RBP3.54□□□□□ -1.84
RPN12YFR052W SEC4P07560 215 aaKnown RBP3.53□□□□□ -1.84
RPN12YFR052W TEM1P38987 245 aa3.53□□□□□ -1.84
RPN12YFR052W SPC1P46965 94 aa3.53□□□□□ -1.84
RPN12YFR052W YGR149WP48236 432 aa3.53□□□□□ -1.84
RPN12YFR052W PMP3P87284 55 aa3.53□□□□□ -1.84
RPN12YFR052W YCR024C-BQ3E7Z8 88 aa3.53□□□□□ -1.84
RPN12YFR052W RRT15Q3E811 62 aa3.53□□□□□ -1.84
RPN12YFR052W YLL066W-BQ8TGJ7 56 aa3.53□□□□□ -1.84
RPN12YFR052W RPL42AP0CX27 106 aaKnown RBP3.52□□□□□ -1.85
RPN12YFR052W RPL42BP0CX28 106 aaKnown RBP3.52□□□□□ -1.85
RPN12YFR052W UBC5P15732 148 aa3.52□□□□□ -1.85
RPN12YFR052W YGL088WP53151 121 aa3.52□□□□□ -1.85
RPN12YFR052W POM33Q12164 279 aa3.52□□□□□ -1.85
RPN12YFR052W WIP1Q2V2P8 89 aa3.52□□□□□ -1.85
RPN12YFR052W TMA7Q3E764 64 aaKnown RBP3.52□□□□□ -1.85
RPN12YFR052W POR1P04840 283 aaKnown RBP3.51□□□□□ -1.85
RPN12YFR052W YBR209WP38311 105 aa3.51□□□□□ -1.85
RPN12YFR052W SVP26P38869 228 aa3.51□□□□□ -1.85
RPN12YFR052W GAT4P40569 121 aa3.51□□□□□ -1.85
RPN12YFR052W DCV1P43595 202 aa3.51□□□□□ -1.85
RPN12YFR052W SAL1D6W196 494 aa3.5□□□□□ -1.85
RPN12YFR052W RPL33AP05744 107 aaKnown RBP3.5□□□□□ -1.85
RPN12YFR052W ANB1P19211 157 aa3.5□□□□□ -1.85
RPN12YFR052W YER076CP40049 302 aa3.5□□□□□ -1.85
RPN12YFR052W ARC15P40518 154 aaRIP-Chip data3.5□□□□□ -1.85not detected
RPN12YFR052W YIL059CP40520 121 aa3.5□□□□□ -1.85
RPN12YFR052W RPL33BP41056 107 aaKnown RBP3.5□□□□□ -1.85
RPN12YFR052W YJL028WP47062 111 aa3.5□□□□□ -1.85
RPN12YFR052W YPR014CQ6B0W2 109 aa3.5□□□□□ -1.85
RPN12YFR052W RTC6O14464 93 aa3.49□□□□□ -1.85
RPN12YFR052W PRE1P22141 198 aaKnown RBP3.49□□□□□ -1.85
RPN12YFR052W YNL200CP40165 246 aaKnown RBP3.49□□□□□ -1.85
RPN12YFR052W HHO1P53551 258 aa3.49□□□□□ -1.85
RPN12YFR052W YMR320WQ04897 101 aa3.49□□□□□ -1.85
RPN12YFR052W FCF1Q05498 189 aaPredicted RBP3.49□□□□□ -1.85
RPN12YFR052W LCL2Q08045 131 aa3.49□□□□□ -1.85
RPN12YFR052W YMR122W-AQ3E842 84 aa3.49□□□□□ -1.85
RPN12YFR052W PAU19P0CE85 124 aa3.48□□□□□ -1.85
RPN12YFR052W PAU21P0CE86 164 aa3.48□□□□□ -1.85
RPN12YFR052W PAU22P0CE87 164 aa3.48□□□□□ -1.85
RPN12YFR052W PAU3P25610 124 aa3.48□□□□□ -1.85
RPN12YFR052W YER085CP40058 173 aa3.48□□□□□ -1.85
RPN12YFR052W GIS2P53849 153 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
RPN12YFR052W ERI1P62651 68 aaKnown RBP3.48□□□□□ -1.85
RPN12YFR052W YIL014C-AQ02598 104 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 76.9 ms