RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C BET1P22804 142 aa0.58□□□□□ -2.32
PRE4YFR050C RPL24BP24000 155 aaKnown RBP0.58□□□□□ -2.32
PRE4YFR050C YBL010CP32788 280 aa0.58□□□□□ -2.32
PRE4YFR050C SHE2P36068 246 aaKnown RBP RIP-Chip data0.58□□□□□ -2.32not detected
PRE4YFR050C YHR138CP38841 114 aaPredicted RBP0.58□□□□□ -2.32
PRE4YFR050C DIE2P50076 525 aa0.58□□□□□ -2.32
PRE4YFR050C ECM12O13529 151 aa0.57□□□□□ -2.32
PRE4YFR050C THP2O13539 261 aaKnown RBP0.57□□□□□ -2.32
PRE4YFR050C YAL064WP39711 94 aa0.57□□□□□ -2.32
PRE4YFR050C YEL067CP39978 195 aa0.57□□□□□ -2.32
PRE4YFR050C CIN5P40917 295 aa0.57□□□□□ -2.32
PRE4YFR050C DCV1P43595 202 aa0.57□□□□□ -2.32
PRE4YFR050C TMA23Q03525 211 aa0.57□□□□□ -2.32
PRE4YFR050C YHR007C-AQ07074 71 aa0.57□□□□□ -2.32
PRE4YFR050C YBL071CP38185 102 aa0.56□□□□□ -2.32
PRE4YFR050C YER085CP40058 173 aa0.56□□□□□ -2.32
PRE4YFR050C YNG1Q08465 219 aa0.56□□□□□ -2.32
PRE4YFR050C SEC11P15367 167 aa0.55□□□□□ -2.32
PRE4YFR050C DER1P38307 211 aa0.55□□□□□ -2.32
PRE4YFR050C ERI1P62651 68 aaKnown RBP0.55□□□□□ -2.32
PRE4YFR050C NMA1Q06178 401 aaKnown RBP0.55□□□□□ -2.32
PRE4YFR050C YPR108W-AQ3E7B3 70 aa0.55□□□□□ -2.32
PRE4YFR050C Q0017Q9ZZX8 53 aa0.55□□□□□ -2.32
PRE4YFR050C AQY2P0CD90 149 aa0.54□□□□□ -2.32
PRE4YFR050C GCN3P14741 305 aa0.54□□□□□ -2.32
PRE4YFR050C CKS1P20486 150 aaKnown RBP0.54□□□□□ -2.32
PRE4YFR050C YHR173CP38864 112 aa0.54□□□□□ -2.32
PRE4YFR050C YJL009WP47078 108 aa0.54□□□□□ -2.32
PRE4YFR050C CWC27Q02770 301 aa0.54□□□□□ -2.32
PRE4YFR050C HRD1Q08109 551 aa0.54□□□□□ -2.32
PRE4YFR050C HUG1Q6Q5K6 68 aa0.54□□□□□ -2.32
PRE4YFR050C YFR032C-BQ8TGU2 87 aa0.54□□□□□ -2.32
PRE4YFR050C YBR121C-AP0C5L4 52 aa0.53□□□□□ -2.32
PRE4YFR050C MAG1P22134 296 aaKnown RBP0.53□□□□□ -2.32
PRE4YFR050C YPL073CP40323 161 aa0.53□□□□□ -2.32
PRE4YFR050C YJR128WP47162 119 aa0.53□□□□□ -2.32
PRE4YFR050C GGA1Q06336 557 aa0.53□□□□□ -2.32
PRE4YFR050C DGA1Q08650 418 aa0.53□□□□□ -2.32
PRE4YFR050C YMR122W-AQ3E842 84 aa0.53□□□□□ -2.32
PRE4YFR050C YLR365WQ7LIF2 110 aa0.53□□□□□ -2.32
PRE4YFR050C SEC4P07560 215 aaKnown RBP0.52□□□□□ -2.33
PRE4YFR050C YER188C-AP0C0V2 99 aa0.52□□□□□ -2.33
PRE4YFR050C RPL27AP0C2H6 136 aaKnown RBP0.52□□□□□ -2.33
PRE4YFR050C NHP6BP11633 99 aaKnown RBP0.52□□□□□ -2.33
PRE4YFR050C ATP15P21306 62 aa0.52□□□□□ -2.33
PRE4YFR050C RTC3P38804 111 aaPredicted RBP0.52□□□□□ -2.33
PRE4YFR050C ERG28P40030 148 aa0.52□□□□□ -2.33
PRE4YFR050C PDR17P53844 350 aa0.52□□□□□ -2.33
PRE4YFR050C LSM7P53905 115 aaKnown RBP0.52□□□□□ -2.33
PRE4YFR050C DYN2Q02647 92 aa0.52□□□□□ -2.33
PRE4YFR050C GRX5Q02784 150 aa0.52□□□□□ -2.33
PRE4YFR050C EST3Q03096 181 aa0.52□□□□□ -2.33
PRE4YFR050C YGL258W-AQ3E740 77 aa0.52□□□□□ -2.33
PRE4YFR050C PET54P10834 293 aa0.51□□□□□ -2.33
PRE4YFR050C CSH1P38287 376 aa0.51□□□□□ -2.33
PRE4YFR050C YHL042WP38729 150 aa0.51□□□□□ -2.33
PRE4YFR050C YHL018WP38744 120 aaPredicted RBP0.51□□□□□ -2.33
PRE4YFR050C SMX2P40204 77 aaKnown RBP0.51□□□□□ -2.33
PRE4YFR050C YFL065CP43539 102 aa0.51□□□□□ -2.33
PRE4YFR050C HNT1Q04344 158 aaKnown RBP0.51□□□□□ -2.33
PRE4YFR050C YKL183C-AQ3E765 70 aa0.51□□□□□ -2.33
PRE4YFR050C YDR157WA0A023PZE8 133 aa0.5□□□□□ -2.33
PRE4YFR050C YCR023CP25351 611 aa0.5□□□□□ -2.33
PRE4YFR050C EMP24P32803 203 aaKnown RBP0.5□□□□□ -2.33
PRE4YFR050C YGL204CP53089 101 aa0.5□□□□□ -2.33
PRE4YFR050C CGR1P53188 120 aa0.5□□□□□ -2.33
PRE4YFR050C BRP1P53194 125 aa0.5□□□□□ -2.33
PRE4YFR050C YMR226CQ05016 267 aaKnown RBP0.5□□□□□ -2.33
PRE4YFR050C ODC2Q99297 307 aa0.5□□□□□ -2.33
PRE4YFR050C POR1P04840 283 aaKnown RBP0.49□□□□□ -2.33
PRE4YFR050C YGL041W-AP0C5N3 154 aa0.49□□□□□ -2.33
PRE4YFR050C UBC5P15732 148 aa0.49□□□□□ -2.33
PRE4YFR050C PAN3P36102 679 aaPredicted RBP0.49□□□□□ -2.33
PRE4YFR050C YIL163CP40448 117 aa0.49□□□□□ -2.33
PRE4YFR050C OTU1P43558 301 aa0.49□□□□□ -2.33
PRE4YFR050C TMA22P47089 198 aaPredicted RBP0.49□□□□□ -2.33
PRE4YFR050C MPC3P53311 146 aa0.49□□□□□ -2.33
PRE4YFR050C YDR366CP87287 132 aa0.49□□□□□ -2.33
PRE4YFR050C MRPS17Q03246 237 aaPredicted RBP0.49□□□□□ -2.33
PRE4YFR050C THI74Q04083 370 aa0.49□□□□□ -2.33
PRE4YFR050C RFA3P26755 122 aaKnown RBP0.48□□□□□ -2.33
PRE4YFR050C UGX2P32772 223 aa0.48□□□□□ -2.33
PRE4YFR050C MRPL24P36525 258 aaPredicted RBP0.48□□□□□ -2.33
PRE4YFR050C SPI1P40092 148 aa0.48□□□□□ -2.33
PRE4YFR050C RPC10P40422 70 aa0.48□□□□□ -2.33
PRE4YFR050C AIM25P47140 327 aa0.48□□□□□ -2.33
PRE4YFR050C YMR295CQ03559 197 aa0.48□□□□□ -2.33
PRE4YFR050C PST2Q12335 198 aaKnown RBP0.48□□□□□ -2.33
PRE4YFR050C YPR145C-AQ2V2P0 78 aa0.48□□□□□ -2.33
PRE4YFR050C YGL041C-BQ3E750 60 aa0.48□□□□□ -2.33
PRE4YFR050C CWC23P52868 283 aaPredicted RBP0.47□□□□□ -2.33
PRE4YFR050C AIM34Q03673 198 aa0.47□□□□□ -2.33
PRE4YFR050C YMR252CQ04814 134 aa0.47□□□□□ -2.33
PRE4YFR050C DYN3Q04949 312 aa0.47□□□□□ -2.33
PRE4YFR050C GPI11Q06636 219 aa0.47□□□□□ -2.33
PRE4YFR050C YLR031WQ07978 186 aa0.47□□□□□ -2.33
PRE4YFR050C SEC59P20048 519 aa0.46□□□□□ -2.34
PRE4YFR050C YEA4P40004 342 aa0.46□□□□□ -2.34
PRE4YFR050C YER134CP40081 178 aa0.46□□□□□ -2.34
PRE4YFR050C MSS2P40990 351 aa0.46□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms