RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W TY1B-MR1Q04214 1755 aa3.01□□□□□ -1.93
UBP6YFR010W TY1B-MR2Q04670 1755 aaKnown RBP3.01□□□□□ -1.93
UBP6YFR010W TY1B-LR1Q12088 1755 aaKnown RBP3.01□□□□□ -1.93
UBP6YFR010W TY1B-NL1Q12112 1755 aa3.01□□□□□ -1.93
UBP6YFR010W TY1B-GR1Q12141 1755 aa3.01□□□□□ -1.93
UBP6YFR010W TY1B-BLQ12490 1755 aa3.01□□□□□ -1.93
UBP6YFR010W PAU21P0CE86 164 aa3□□□□□ -1.93
UBP6YFR010W PAU22P0CE87 164 aa3□□□□□ -1.93
UBP6YFR010W KRE1P17260 313 aa3□□□□□ -1.93
UBP6YFR010W RPA12P32529 125 aaKnown RBP3□□□□□ -1.93
UBP6YFR010W MRPL27P36526 146 aaPredicted RBP3□□□□□ -1.93
UBP6YFR010W ECM34P38728 170 aa3□□□□□ -1.93
UBP6YFR010W YHR180WP38868 163 aa3□□□□□ -1.93
UBP6YFR010W HSP10P38910 106 aa3□□□□□ -1.93
UBP6YFR010W YEL067CP39978 195 aa3□□□□□ -1.93
UBP6YFR010W PAU12P53343 120 aa3□□□□□ -1.93
UBP6YFR010W PIR1Q03178 341 aa3□□□□□ -1.93
UBP6YFR010W NMA1Q06178 401 aaKnown RBP3□□□□□ -1.93
UBP6YFR010W YOR268CQ08734 132 aa3□□□□□ -1.93
UBP6YFR010W ATG41Q12048 136 aa3□□□□□ -1.93
UBP6YFR010W ENV10Q99382 181 aa3□□□□□ -1.93
UBP6YFR010W MSB2P32334 1306 aa3□□□□□ -1.93
UBP6YFR010W ESP1Q03018 1630 aa3□□□□□ -1.93
UBP6YFR010W TY2B-LR1P0C2J3 1770 aa3□□□□□ -1.93
UBP6YFR010W TY2B-FP0CX63 1770 aa3□□□□□ -1.93
UBP6YFR010W TY2B-GR2P0CX64 1770 aa3□□□□□ -1.93
UBP6YFR010W TY2B-CP25384 1770 aa3□□□□□ -1.93
UBP6YFR010W TY2B-DR2Q03494 1770 aa3□□□□□ -1.93
UBP6YFR010W TY2B-DR3Q07791 1770 aaKnown RBP3□□□□□ -1.93
UBP6YFR010W TY2B-OR1Q12113 1770 aa3□□□□□ -1.93
UBP6YFR010W TY2B-DR1Q12472 1770 aa3□□□□□ -1.93
UBP6YFR010W TY2B-BQ12491 1770 aa3□□□□□ -1.93
UBP6YFR010W TY2B-OR2Q12501 1770 aa3□□□□□ -1.93
UBP6YFR010W RPL40AP0CH08 128 aaKnown RBP2.99□□□□□ -1.93
UBP6YFR010W RPL40BP0CH09 128 aaKnown RBP2.99□□□□□ -1.93
UBP6YFR010W YNR077CP53758 84 aa2.99□□□□□ -1.93
UBP6YFR010W IQG1Q12280 1495 aa2.99□□□□□ -1.93
UBP6YFR010W HSP26P15992 214 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
UBP6YFR010W PAU2P32612 120 aa2.98□□□□□ -1.93
UBP6YFR010W YMR175W-AQ3E766 64 aa2.98□□□□□ -1.93
UBP6YFR010W YLR422WQ06409 1932 aa2.98□□□□□ -1.93
UBP6YFR010W YHR213WP0CI67 198 aa2.98□□□□□ -1.93
UBP6YFR010W YGR269WP40326 108 aa2.98□□□□□ -1.93
UBP6YFR010W YGL149WP53116 101 aa2.98□□□□□ -1.93
UBP6YFR010W RPL22BP56628 122 aaKnown RBP2.98□□□□□ -1.93
UBP6YFR010W YOL131WQ08270 108 aa2.98□□□□□ -1.93
UBP6YFR010W NAT5Q08689 176 aa2.98□□□□□ -1.93
UBP6YFR010W RPS25AQ3E792 108 aaPredicted RBP2.98□□□□□ -1.93
UBP6YFR010W SSK2P53599 1579 aa2.97□□□□□ -1.93
UBP6YFR010W YCF1P39109 1515 aaKnown RBP2.97□□□□□ -1.93
UBP6YFR010W YKR032WP36127 104 aa2.97□□□□□ -1.93
UBP6YFR010W YPR013CQ12145 317 aa2.97□□□□□ -1.93
UBP6YFR010W OST5Q92316 86 aa2.97□□□□□ -1.93
UBP6YFR010W PAU19P0CE85 124 aa2.96□□□□□ -1.94
UBP6YFR010W RPS23AP0CX29 145 aaKnown RBP2.96□□□□□ -1.94
UBP6YFR010W RPS23BP0CX30 145 aa2.96□□□□□ -1.94
UBP6YFR010W PAU3P25610 124 aa2.96□□□□□ -1.94
UBP6YFR010W PAU24P38155 120 aa2.96□□□□□ -1.94
UBP6YFR010W DCV1P43595 202 aa2.96□□□□□ -1.94
UBP6YFR010W TMC1Q08422 150 aaPredicted RBP2.96□□□□□ -1.94
UBP6YFR010W YLR236CA0A023PZG4 107 aa2.95□□□□□ -1.94
UBP6YFR010W TOM6P33448 61 aa2.95□□□□□ -1.94
UBP6YFR010W ATX1P38636 73 aa2.95□□□□□ -1.94
UBP6YFR010W GCV3P39726 170 aaPredicted RBP2.95□□□□□ -1.94
UBP6YFR010W RSM18P40033 138 aa2.95□□□□□ -1.94
UBP6YFR010W BRP1P53194 125 aa2.95□□□□□ -1.94
UBP6YFR010W POP3P53833 195 aaPredicted RBP2.95□□□□□ -1.94
UBP6YFR010W ICY1Q04329 127 aa2.95□□□□□ -1.94
UBP6YFR010W YPR153WQ06537 140 aa2.95□□□□□ -1.94
UBP6YFR010W GDB1Q06625 1536 aa2.95□□□□□ -1.94
UBP6YFR010W ATG8P38182 117 aaRIP-Chip data2.94□□□□□ -1.94not detected
UBP6YFR010W RPL33BP41056 107 aaKnown RBP2.94□□□□□ -1.94
UBP6YFR010W YDR119W-AQ2V2P9 66 aa2.94□□□□□ -1.94
UBP6YFR010W PCC1Q3E833 88 aa2.94□□□□□ -1.94
UBP6YFR010W VPS15P22219 1454 aa2.94□□□□□ -1.94
UBP6YFR010W FKS1P38631 1876 aaKnown RBP2.94□□□□□ -1.94
UBP6YFR010W MYO1P08964 1928 aa2.93□□□□□ -1.94
UBP6YFR010W PAU16P35994 123 aa2.93□□□□□ -1.94
UBP6YFR010W YHL005CP38752 130 aa2.93□□□□□ -1.94
UBP6YFR010W PAU15P40585 124 aa2.93□□□□□ -1.94
UBP6YFR010W YFL051CP43552 160 aa2.93□□□□□ -1.94
UBP6YFR010W YJL027CP47063 138 aaPredicted RBP2.93□□□□□ -1.94
UBP6YFR010W BOL2P53082 120 aa2.93□□□□□ -1.94
UBP6YFR010W CUE4Q04201 117 aaPredicted RBP2.93□□□□□ -1.94
UBP6YFR010W DOP1Q03921 1698 aa2.93□□□□□ -1.94
UBP6YFR010W GSC2P40989 1895 aa2.93□□□□□ -1.94
UBP6YFR010W POL1P13382 1468 aa2.93□□□□□ -1.94
UBP6YFR010W MRPS9P38120 278 aa2.93□□□□□ -1.94
UBP6YFR010W MRPS16Q02608 121 aa2.93□□□□□ -1.94
UBP6YFR010W YIL134C-AQ45U18 67 aa2.93□□□□□ -1.94
UBP6YFR010W RTC6O14464 93 aa2.92□□□□□ -1.94
UBP6YFR010W SOD1P00445 154 aaKnown RBP2.92□□□□□ -1.94
UBP6YFR010W UTH1P36135 365 aa2.92□□□□□ -1.94
UBP6YFR010W YIR020CP40575 100 aa2.92□□□□□ -1.94
UBP6YFR010W YFL012WP43580 148 aa2.92□□□□□ -1.94
UBP6YFR010W YPI1P43587 155 aa2.92□□□□□ -1.94
UBP6YFR010W ICS3P47034 131 aa2.92□□□□□ -1.94
UBP6YFR010W RGM1Q00453 211 aa2.92□□□□□ -1.94
UBP6YFR010W YIL014C-AQ02598 104 aa2.92□□□□□ -1.94
UBP6YFR010W YPR195CQ06594 109 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms