RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	EDC2	P40023	145 aa	Predicted RBP	2.78	□□□□□ -1.96
UBC8	YEL012W	YER085C	P40058	173 aa		2.78	□□□□□ -1.96
UBC8	YEL012W	SPI1	P40092	148 aa		2.78	□□□□□ -1.96
UBC8	YEL012W	AVO2	Q04749	426 aa		2.78	□□□□□ -1.96
UBC8	YEL012W	YMR253C	Q04835	414 aa		2.78	□□□□□ -1.96
UBC8	YEL012W	YPL229W	Q99395	206 aa		2.78	□□□□□ -1.96
UBC8	YEL012W	YNL217W	P40152	326 aa		2.77	□□□□□ -1.97
UBC8	YEL012W	RPL13B	P40212	199 aa	Known RBP	2.77	□□□□□ -1.97
UBC8	YEL012W	SPC1	P46965	94 aa		2.77	□□□□□ -1.97
UBC8	YEL012W	FCF1	Q05498	189 aa	Predicted RBP	2.77	□□□□□ -1.97
UBC8	YEL012W	SDO1	Q07953	250 aa	Known RBP	2.77	□□□□□ -1.97
UBC8	YEL012W	RPL13A	Q12690	199 aa	Predicted RBP	2.77	□□□□□ -1.97
UBC8	YEL012W	YGR240C-A	Q3E786	66 aa		2.77	□□□□□ -1.97
UBC8	YEL012W	RTC6	O14464	93 aa		2.76	□□□□□ -1.97
UBC8	YEL012W	YDR034C-A	P0C289	58 aa		2.76	□□□□□ -1.97
UBC8	YEL012W	CPT1	P17898	393 aa		2.76	□□□□□ -1.97
UBC8	YEL012W	AHT1	P29589	182 aa		2.76	□□□□□ -1.97
UBC8	YEL012W	TRS20	P38334	175 aa		2.76	□□□□□ -1.97
UBC8	YEL012W	SVP26	P38869	228 aa		2.76	□□□□□ -1.97
UBC8	YEL012W	TAD2	P47058	250 aa		2.76	□□□□□ -1.97
UBC8	YEL012W	YJL028W	P47062	111 aa		2.76	□□□□□ -1.97
UBC8	YEL012W	DIA1	P54005	336 aa		2.76	□□□□□ -1.97
UBC8	YEL012W	DID2	P69771	204 aa		2.76	□□□□□ -1.97
UBC8	YEL012W	RAV2	Q03956	351 aa		2.76	□□□□□ -1.97
UBC8	YEL012W	HSP12	P22943	109 aa	Known RBP	2.75	□□□□□ -1.97
UBC8	YEL012W	ARC18	Q05933	178 aa	Known RBP	2.75	□□□□□ -1.97
UBC8	YEL012W	SME1	Q12330	94 aa	Predicted RBP	2.75	□□□□□ -1.97
UBC8	YEL012W	RNA15	P25299	296 aa	Predicted RBP	2.74	□□□□□ -1.97
UBC8	YEL012W	MRPL28	P36527	147 aa		2.74	□□□□□ -1.97
UBC8	YEL012W	YBL081W	P38180	368 aa	Known RBP	2.74	□□□□□ -1.97
UBC8	YEL012W	POG1	P40473	351 aa		2.74	□□□□□ -1.97
UBC8	YEL012W	YLR179C	Q06252	201 aa	Known RBP	2.74	□□□□□ -1.97
UBC8	YEL012W	YBR200W-A	Q3E755	54 aa		2.74	□□□□□ -1.97
UBC8	YEL012W	YDR157W	A0A023PZE8	133 aa		2.73	□□□□□ -1.97
UBC8	YEL012W	RPL33A	P05744	107 aa	Known RBP	2.73	□□□□□ -1.97
UBC8	YEL012W	MRS1	P07266	363 aa		2.73	□□□□□ -1.97
UBC8	YEL012W	QCR9	P22289	66 aa		2.73	□□□□□ -1.97
UBC8	YEL012W	SEC72	P39742	193 aa	Known RBP	2.73	□□□□□ -1.97
UBC8	YEL012W	YEA4	P40004	342 aa		2.73	□□□□□ -1.97
UBC8	YEL012W	RPL33B	P41056	107 aa	Known RBP	2.73	□□□□□ -1.97
UBC8	YEL012W	MGA1	P53050	456 aa		2.73	□□□□□ -1.97
UBC8	YEL012W	BRP1	P53194	125 aa		2.73	□□□□□ -1.97
UBC8	YEL012W	DXO1	Q06349	442 aa		2.73	□□□□□ -1.97
UBC8	YEL012W	CKS1	P20486	150 aa	Known RBP	2.72	□□□□□ -1.97
UBC8	YEL012W	YCR023C	P25351	611 aa		2.72	□□□□□ -1.97
UBC8	YEL012W	AME1	P38313	324 aa		2.72	□□□□□ -1.97
UBC8	YEL012W	YDR366C	P87287	132 aa		2.72	□□□□□ -1.97
UBC8	YEL012W	AIM34	Q03673	198 aa		2.72	□□□□□ -1.97
UBC8	YEL012W	RUB1	Q03919	77 aa		2.72	□□□□□ -1.97
UBC8	YEL012W	YLR042C	Q07990	161 aa		2.72	□□□□□ -1.97
UBC8	YEL012W	DGA1	Q08650	418 aa		2.72	□□□□□ -1.97
UBC8	YEL012W	YOR015W	Q12169	119 aa		2.72	□□□□□ -1.97
UBC8	YEL012W	YCL001W-B	Q96VH2	84 aa		2.72	□□□□□ -1.97
UBC8	YEL012W	DDR48	P18899	430 aa	Known RBP	2.71	□□□□□ -1.98
UBC8	YEL012W	QRI5	P32344	111 aa		2.71	□□□□□ -1.98
UBC8	YEL012W	YBR090C	P38253	122 aa		2.71	□□□□□ -1.98
UBC8	YEL012W	YIL163C	P40448	117 aa		2.71	□□□□□ -1.98
UBC8	YEL012W	EMC5	P40540	141 aa		2.71	□□□□□ -1.98
UBC8	YEL012W	YFR045W	P43617	309 aa		2.71	□□□□□ -1.98
UBC8	YEL012W	DAD4	P69851	72 aa		2.71	□□□□□ -1.98
UBC8	YEL012W	CSM4	Q08955	156 aa		2.71	□□□□□ -1.98
UBC8	YEL012W	YLR307C-A	Q3E825	87 aa		2.71	□□□□□ -1.98
UBC8	YEL012W	YAR023C	D6VPM8	179 aa		2.7	□□□□□ -1.98
UBC8	YEL012W	RPL27A	P0C2H6	136 aa	Known RBP	2.7	□□□□□ -1.98
UBC8	YEL012W	RPL27B	P0C2H7	136 aa	Known RBP	2.7	□□□□□ -1.98
UBC8	YEL012W	FCF2	Q12035	217 aa	Predicted RBP	2.7	□□□□□ -1.98
UBC8	YEL012W	FZF1	P32805	299 aa		2.69	□□□□□ -1.98
UBC8	YEL012W	GSP1	P32835	219 aa	Known RBP	2.69	□□□□□ -1.98
UBC8	YEL012W	GSP2	P32836	220 aa	Known RBP	2.69	□□□□□ -1.98
UBC8	YEL012W	YHR173C	P38864	112 aa		2.69	□□□□□ -1.98
UBC8	YEL012W	YIL059C	P40520	121 aa		2.69	□□□□□ -1.98
UBC8	YEL012W	YMR320W	Q04897	101 aa		2.69	□□□□□ -1.98
UBC8	YEL012W	FYV7	Q12247	151 aa		2.69	□□□□□ -1.98
UBC8	YEL012W	DAD1	Q12248	94 aa		2.69	□□□□□ -1.98
UBC8	YEL012W	SNU23	Q12368	194 aa	Predicted RBP	2.69	□□□□□ -1.98
UBC8	YEL012W	YGL194C-A	Q2V2P6	80 aa		2.69	□□□□□ -1.98
UBC8	YEL012W	WIP1	Q2V2P8	89 aa		2.69	□□□□□ -1.98
UBC8	YEL012W	YBL112C	Q3E7Y4	105 aa		2.69	□□□□□ -1.98
UBC8	YEL012W	NHP6A	P11632	93 aa	Known RBP	2.68	□□□□□ -1.98
UBC8	YEL012W	PGD1	P40356	397 aa		2.68	□□□□□ -1.98
UBC8	YEL012W	OST3	P48439	350 aa		2.68	□□□□□ -1.98
UBC8	YEL012W	MMS2	P53152	137 aa		2.68	□□□□□ -1.98
UBC8	YEL012W	CWC27	Q02770	301 aa		2.68	□□□□□ -1.98
UBC8	YEL012W	YLR342W-A	Q3E810	57 aa		2.68	□□□□□ -1.98
UBC8	YEL012W	SEC59	P20048	519 aa		2.67	□□□□□ -1.98
UBC8	YEL012W	RPL14A	P36105	138 aa	Known RBP	2.67	□□□□□ -1.98
UBC8	YEL012W	RPL14B	P38754	138 aa	Known RBP	2.67	□□□□□ -1.98
UBC8	YEL012W	YGR017W	P53210	297 aa		2.67	□□□□□ -1.98
UBC8	YEL012W	LSM8	P47093	109 aa	Known RBP	2.66	□□□□□ -1.98
UBC8	YEL012W	LCL1	Q02786	101 aa		2.66	□□□□□ -1.98
UBC8	YEL012W	TIM22	Q12328	207 aa		2.66	□□□□□ -1.98
UBC8	YEL012W	YDR010C	Q12426	110 aa		2.66	□□□□□ -1.98
UBC8	YEL012W	UBI4	P0CG63	381 aa	Known RBP	2.65	□□□□□ -1.99
UBC8	YEL012W	UBC5	P15732	148 aa		2.65	□□□□□ -1.99
UBC8	YEL012W	CNB1	P25296	175 aa		2.65	□□□□□ -1.99
UBC8	YEL012W	SRP14	P38985	146 aa		2.65	□□□□□ -1.99
UBC8	YEL012W	ERG28	P40030	148 aa		2.65	□□□□□ -1.99
UBC8	YEL012W	YGL034C	P53186	121 aa		2.65	□□□□□ -1.99
UBC8	YEL012W	ANT1	Q06497	328 aa		2.65	□□□□□ -1.99
UBC8	YEL012W	YDR029W	Q12111	104 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms