RNA–Protein interactions for RNA: YAR042W

SWH1, Transcript of Protein similar to mammalian oxysterol-binding protein, yeast

Gene SWH1, Length 3,567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWH1	YAR042W	HMRA2	P0CY13	119 aa		3.06	□□□□□ -1.92
SWH1	YAR042W	RPA12	P32529	125 aa	Known RBP	3.06	□□□□□ -1.92
SWH1	YAR042W	RPL32	P38061	130 aa	Known RBP	3.06	□□□□□ -1.92
SWH1	YAR042W	MBB1	P39534	108 aa		3.06	□□□□□ -1.92
SWH1	YAR042W	YGR039W	P53225	103 aa		3.06	□□□□□ -1.92
SWH1	YAR042W	PCL2	P25693	308 aa		3.06	□□□□□ -1.92
SWH1	YAR042W	YFL015C	P43578	164 aa		3.06	□□□□□ -1.92
SWH1	YAR042W	GAT3	Q07928	141 aa		3.06	□□□□□ -1.92
SWH1	YAR042W	YKL070W	P36087	169 aa		3.06	□□□□□ -1.92
SWH1	YAR042W	YEL067C	P39978	195 aa		3.06	□□□□□ -1.92
SWH1	YAR042W	HST4	P53688	370 aa		3.06	□□□□□ -1.92
SWH1	YAR042W	YOR097C	Q12274	175 aa	Predicted RBP	3.06	□□□□□ -1.92
SWH1	YAR042W	YJL118W	P47022	219 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	GPI19	Q04082	140 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	LSM6	Q06406	86 aa	Known RBP	3.05	□□□□□ -1.92
SWH1	YAR042W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
SWH1	YAR042W	AQY1	P0CD91	305 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	YHR140W	P38842	239 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	PIR5	P46999	287 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	YLR112W	Q12130	139 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	FCY1	Q12178	158 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	MOH1	P38191	138 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	DSE2	P38844	325 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	YER076C	P40049	302 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	SIP18	P50263	79 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	YNR077C	P53758	84 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	MOT3	P54785	490 aa	Known RBP	3.05	□□□□□ -1.92
SWH1	YAR042W	RXT3	Q07458	294 aa		3.05	□□□□□ -1.92
SWH1	YAR042W	YDL022C-A	P0C5L6	82 aa		3.04	□□□□□ -1.92
SWH1	YAR042W	YFL051C	P43552	160 aa		3.04	□□□□□ -1.92
SWH1	YAR042W	ABF2	Q02486	183 aa		3.04	□□□□□ -1.92
SWH1	YAR042W	SEN1	Q00416	2231 aa	Known RBP	3.04	□□□□□ -1.92
SWH1	YAR042W	RPB10	P22139	70 aa		3.04	□□□□□ -1.92
SWH1	YAR042W	MID2	P36027	376 aa		3.04	□□□□□ -1.92
SWH1	YAR042W	CWP2	P43497	92 aa		3.04	□□□□□ -1.92
SWH1	YAR042W	YMR181C	Q03231	154 aa		3.04	□□□□□ -1.92
SWH1	YAR042W	MSN1	P22148	382 aa		3.04	□□□□□ -1.92
SWH1	YAR042W	MRPL20	P22354	195 aa	Predicted RBP	3.04	□□□□□ -1.92
SWH1	YAR042W	YER085C	P40058	173 aa		3.04	□□□□□ -1.92
SWH1	YAR042W	BNA2	P47125	453 aa		3.04	□□□□□ -1.92
SWH1	YAR042W	YIR021W-A	Q3E739	70 aa		3.04	□□□□□ -1.92
SWH1	YAR042W	YAL063C-A	Q3E791	96 aa		3.04	□□□□□ -1.92
SWH1	YAR042W	RPS26B	P39939	119 aa	Known RBP	3.03	□□□□□ -1.92
SWH1	YAR042W	VTC1	P40046	129 aa	RIP-Chip data	3.03	□□□□□ -1.92	not detected
SWH1	YAR042W	FIP1	P45976	327 aa		3.03	□□□□□ -1.92
SWH1	YAR042W	YIP3	P53633	176 aa		3.03	□□□□□ -1.92
SWH1	YAR042W	YOR029W	Q12243	111 aa		3.03	□□□□□ -1.92
SWH1	YAR042W	YHR213W	P0CI67	198 aa		3.03	□□□□□ -1.92
SWH1	YAR042W	RRT1	P38192	103 aa		3.03	□□□□□ -1.92
SWH1	YAR042W	MGR2	Q02889	113 aa		3.03	□□□□□ -1.92
SWH1	YAR042W	FCF1	Q05498	189 aa	Predicted RBP	3.03	□□□□□ -1.92
SWH1	YAR042W	TIM22	Q12328	207 aa		3.03	□□□□□ -1.92
SWH1	YAR042W	RPL39	P04650	51 aa		3.02	□□□□□ -1.93
SWH1	YAR042W	PFY1	P07274	126 aa		3.02	□□□□□ -1.93
SWH1	YAR042W	NRG2	P38082	220 aa		3.02	□□□□□ -1.93
SWH1	YAR042W	AIM34	Q03673	198 aa		3.02	□□□□□ -1.93
SWH1	YAR042W	YLR361C-A	Q3E795	98 aa		3.02	□□□□□ -1.93
SWH1	YAR042W	IGO2	Q9P305	131 aa		3.02	□□□□□ -1.93
SWH1	YAR042W	YNL217W	P40152	326 aa		3.02	□□□□□ -1.93
SWH1	YAR042W	YIP1	P53039	248 aa		3.02	□□□□□ -1.93
SWH1	YAR042W	KTI12	P34253	313 aa	Known RBP	3.02	□□□□□ -1.93
SWH1	YAR042W	RPS26A	P39938	119 aa	Known RBP	3.02	□□□□□ -1.93
SWH1	YAR042W	RRG8	Q06109	277 aa		3.02	□□□□□ -1.93
SWH1	YAR042W	COA3	Q3E7B2	85 aa		3.02	□□□□□ -1.93
SWH1	YAR042W	YLR342W-A	Q3E810	57 aa		3.02	□□□□□ -1.93
SWH1	YAR042W	YMR105W-A	Q8TGS8	64 aa		3.02	□□□□□ -1.93
SWH1	YAR042W	AGA1	P32323	725 aa		3.01	□□□□□ -1.93
SWH1	YAR042W	YKR045C	P36138	183 aa		3.01	□□□□□ -1.93
SWH1	YAR042W	GLO1	P50107	326 aa		3.01	□□□□□ -1.93
SWH1	YAR042W	PRM7	Q12459	698 aa		3.01	□□□□□ -1.93
SWH1	YAR042W	KRE1	P17260	313 aa		3.01	□□□□□ -1.93
SWH1	YAR042W	IRC23	Q08416	157 aa		3.01	□□□□□ -1.93
SWH1	YAR042W	YPL278C	Q08990	100 aa		3.01	□□□□□ -1.93
SWH1	YAR042W	YBR056W-A	I2HB52	66 aa		3.01	□□□□□ -1.93
SWH1	YAR042W	YCH1	P42937	148 aa		3.01	□□□□□ -1.93
SWH1	YAR042W	AIM11	P87275	137 aa		3.01	□□□□□ -1.93
SWH1	YAR042W	YLR194C	Q05777	254 aa		3.01	□□□□□ -1.93
SWH1	YAR042W	YTH1	Q06102	208 aa	Predicted RBP	3.01	□□□□□ -1.93
SWH1	YAR042W	YFL041W-A	Q3E817	63 aa		3.01	□□□□□ -1.93
SWH1	YAR042W	VPS55	P47111	140 aa		3	□□□□□ -1.93
SWH1	YAR042W	KNH1	P50112	268 aa		3	□□□□□ -1.93
SWH1	YAR042W	COF1	Q03048	143 aa	Known RBP	3	□□□□□ -1.93
SWH1	YAR042W	YIA6	P40556	373 aa		3	□□□□□ -1.93
SWH1	YAR042W	IMP2	P46972	177 aa		3	□□□□□ -1.93
SWH1	YAR042W	TOS6	P48560	102 aa		3	□□□□□ -1.93
SWH1	YAR042W	RPL28	P02406	149 aa	Known RBP	3	□□□□□ -1.93
SWH1	YAR042W	ATP15	P21306	62 aa		3	□□□□□ -1.93
SWH1	YAR042W	YIL059C	P40520	121 aa		3	□□□□□ -1.93
SWH1	YAR042W	MRPL49	P40858	161 aa	Predicted RBP	3	□□□□□ -1.93
SWH1	YAR042W	YNL046W	P53956	172 aa		3	□□□□□ -1.93
SWH1	YAR042W	YOR008C-A	Q3E7B9	74 aa		3	□□□□□ -1.93
SWH1	YAR042W	RPS23A	P0CX29	145 aa	Known RBP	2.99	□□□□□ -1.93
SWH1	YAR042W	RPS23B	P0CX30	145 aa		2.99	□□□□□ -1.93
SWH1	YAR042W	YCR085W	P25650	117 aa		2.99	□□□□□ -1.93
SWH1	YAR042W	MIC12	P38341	106 aa		2.99	□□□□□ -1.93
SWH1	YAR042W	GLE2	P40066	365 aa		2.99	□□□□□ -1.93
SWH1	YAR042W	SKI6	P46948	246 aa	Predicted RBP	2.99	□□□□□ -1.93
SWH1	YAR042W	YMR317W	Q04893	1140 aa		2.99	□□□□□ -1.93
SWH1	YAR042W	ENV10	Q99382	181 aa		2.99	□□□□□ -1.93
SWH1	YAR042W	YHR139C-A	O13536	103 aa		2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms