RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W TMC1Q08422 150 aaPredicted RBP1.48□□□□□ -2.17
VPS8YAL002W YOR015WQ12169 119 aa1.48□□□□□ -2.17
VPS8YAL002W PRE1P22141 198 aaKnown RBP1.48□□□□□ -2.17
VPS8YAL002W MIG1P27705 504 aa1.48□□□□□ -2.17
VPS8YAL002W FZF1P32805 299 aa1.48□□□□□ -2.17
VPS8YAL002W YKR032WP36127 104 aa1.48□□□□□ -2.17
VPS8YAL002W PAM17P36147 197 aa1.48□□□□□ -2.17
VPS8YAL002W RCE1Q03530 315 aa1.48□□□□□ -2.17
VPS8YAL002W KEI1Q06346 221 aa1.48□□□□□ -2.17
VPS8YAL002W RPL13AQ12690 199 aaPredicted RBP1.48□□□□□ -2.17
VPS8YAL002W MED11Q99278 115 aa1.48□□□□□ -2.17
VPS8YAL002W UBC5P15732 148 aa1.48□□□□□ -2.17
VPS8YAL002W SCM4P32564 187 aa1.48□□□□□ -2.17
VPS8YAL002W CCS1P40202 249 aaKnown RBP1.48□□□□□ -2.17
VPS8YAL002W YMR103CQ04436 120 aa1.48□□□□□ -2.17
VPS8YAL002W RIM9Q04734 239 aa1.48□□□□□ -2.17
VPS8YAL002W YPR174CQ06616 221 aaPredicted RBP1.48□□□□□ -2.17
VPS8YAL002W SCP1Q08873 200 aa1.48□□□□□ -2.17
VPS8YAL002W UIP4Q08926 304 aa1.48□□□□□ -2.17
VPS8YAL002W RPL43AP0CX25 92 aaKnown RBP1.47□□□□□ -2.17
VPS8YAL002W RPL43BP0CX26 92 aa1.47□□□□□ -2.17
VPS8YAL002W YCR099CP25657 155 aa1.47□□□□□ -2.17
VPS8YAL002W CLB6P32943 380 aa1.47□□□□□ -2.17
VPS8YAL002W SRL3P36167 246 aa1.47□□□□□ -2.17
VPS8YAL002W ERV15P38312 142 aa1.47□□□□□ -2.17
VPS8YAL002W IRC23Q08416 157 aa1.47□□□□□ -2.17
VPS8YAL002W YCR075W-AQ3E830 75 aa1.47□□□□□ -2.17
VPS8YAL002W RPS23AP0CX29 145 aaKnown RBP1.47□□□□□ -2.17
VPS8YAL002W RPS23BP0CX30 145 aa1.47□□□□□ -2.17
VPS8YAL002W MAK31P23059 88 aa1.47□□□□□ -2.17
VPS8YAL002W YEL045CP32616 141 aa1.47□□□□□ -2.17
VPS8YAL002W YHR130CP38834 111 aa1.47□□□□□ -2.17
VPS8YAL002W SNF11P38956 169 aa1.47□□□□□ -2.17
VPS8YAL002W YIL059CP40520 121 aa1.47□□□□□ -2.17
VPS8YAL002W GTT2Q12390 233 aa1.47□□□□□ -2.17
VPS8YAL002W YGL194C-AQ2V2P6 80 aa1.47□□□□□ -2.17
VPS8YAL002W LAA1P39526 2014 aa1.47□□□□□ -2.17
VPS8YAL002W HSP26P15992 214 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
VPS8YAL002W YGL010WP25338 174 aa1.47□□□□□ -2.17
VPS8YAL002W RPL33BP41056 107 aaKnown RBP1.47□□□□□ -2.17
VPS8YAL002W ERG25P53045 309 aa1.47□□□□□ -2.17
VPS8YAL002W YCL001W-AP87012 153 aa1.47□□□□□ -2.17
VPS8YAL002W YML079WQ03629 201 aa1.46□□□□□ -2.18
VPS8YAL002W YMR090WQ04304 227 aaKnown RBP1.46□□□□□ -2.18
VPS8YAL002W YKL044WP36092 106 aa1.46□□□□□ -2.18
VPS8YAL002W ERV14P53173 138 aa1.46□□□□□ -2.18
VPS8YAL002W MZM1Q03429 123 aaPredicted RBP1.46□□□□□ -2.18
VPS8YAL002W YOR385WQ08909 290 aa1.46□□□□□ -2.18
VPS8YAL002W SRX1P36077 127 aa1.46□□□□□ -2.18
VPS8YAL002W SNU13P39990 126 aaKnown RBP1.46□□□□□ -2.18
VPS8YAL002W YFL012WP43580 148 aa1.46□□□□□ -2.18
VPS8YAL002W YGR164WP53291 111 aa1.46□□□□□ -2.18
VPS8YAL002W IRC19Q07843 230 aa1.46□□□□□ -2.18
VPS8YAL002W RPL26AP05743 127 aaKnown RBP1.45□□□□□ -2.18
VPS8YAL002W QCR10P37299 77 aa1.45□□□□□ -2.18
VPS8YAL002W TIR3P40552 269 aa1.45□□□□□ -2.18
VPS8YAL002W BOL2P53082 120 aa1.45□□□□□ -2.18
VPS8YAL002W RPL26BP53221 127 aaKnown RBP1.45□□□□□ -2.18
VPS8YAL002W YBR209WP38311 105 aa1.45□□□□□ -2.18
VPS8YAL002W YNR077CP53758 84 aa1.45□□□□□ -2.18
VPS8YAL002W DAD4P69851 72 aa1.45□□□□□ -2.18
VPS8YAL002W YHP1Q04116 353 aa1.45□□□□□ -2.18
VPS8YAL002W CUE4Q04201 117 aaPredicted RBP1.45□□□□□ -2.18
VPS8YAL002W SOM1Q05676 74 aa1.45□□□□□ -2.18
VPS8YAL002W ATG41Q12048 136 aa1.45□□□□□ -2.18
VPS8YAL002W YLR236CA0A023PZG4 107 aa1.45□□□□□ -2.18
VPS8YAL002W HAP3P13434 144 aa1.45□□□□□ -2.18
VPS8YAL002W UPS3Q04006 179 aa1.45□□□□□ -2.18
VPS8YAL002W NMA1Q06178 401 aaKnown RBP1.45□□□□□ -2.18
VPS8YAL002W MRPL44P19956 98 aa1.44□□□□□ -2.18
VPS8YAL002W SVP26P38869 228 aa1.44□□□□□ -2.18
VPS8YAL002W PIR1Q03178 341 aa1.44□□□□□ -2.18
VPS8YAL002W GPI19Q04082 140 aa1.44□□□□□ -2.18
VPS8YAL002W RAF1Q06891 181 aa1.44□□□□□ -2.18
VPS8YAL002W FYV5P25585 152 aa1.44□□□□□ -2.18
VPS8YAL002W MRPS9P38120 278 aa1.44□□□□□ -2.18
VPS8YAL002W YGR269WP40326 108 aa1.44□□□□□ -2.18
VPS8YAL002W YFR035CP43608 114 aa1.44□□□□□ -2.18
VPS8YAL002W FIT1Q04433 528 aa1.44□□□□□ -2.18
VPS8YAL002W YDL241WQ07738 123 aa1.44□□□□□ -2.18
VPS8YAL002W FEX1Q08913 375 aa1.44□□□□□ -2.18
VPS8YAL002W FEX2Q08991 375 aa1.44□□□□□ -2.18
VPS8YAL002W YPR013CQ12145 317 aa1.44□□□□□ -2.18
VPS8YAL002W COA6Q3E846 104 aa1.44□□□□□ -2.18
VPS8YAL002W COX5BP00425 151 aa1.44□□□□□ -2.18
VPS8YAL002W HSP10P38910 106 aa1.44□□□□□ -2.18
VPS8YAL002W PEX4P29340 183 aa1.43□□□□□ -2.18
VPS8YAL002W YGL149WP53116 101 aa1.43□□□□□ -2.18
VPS8YAL002W YLR365WQ7LIF2 110 aa1.43□□□□□ -2.18
VPS8YAL002W SEC11P15367 167 aa1.43□□□□□ -2.18
VPS8YAL002W MRPL11P36521 249 aaPredicted RBP1.43□□□□□ -2.18
VPS8YAL002W ECM31P38122 312 aa1.43□□□□□ -2.18
VPS8YAL002W GTT1P40582 234 aa1.43□□□□□ -2.18
VPS8YAL002W PIR5P46999 287 aa1.43□□□□□ -2.18
VPS8YAL002W KNH1P50112 268 aa1.43□□□□□ -2.18
VPS8YAL002W YDR114CQ04597 100 aa1.43□□□□□ -2.18
VPS8YAL002W SWC7Q06707 132 aa1.43□□□□□ -2.18
VPS8YAL002W YDR029WQ12111 104 aa1.43□□□□□ -2.18
VPS8YAL002W YLR422WQ06409 1932 aa1.43□□□□□ -2.18
VPS8YAL002W YIL046W-AQ3E7Z4 54 aa1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms