RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 PGBD4Q96DM1 585 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 HEMGNQ9BXL5 484 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 SLC4A5Q9BY07 1137 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 DPH5Q9H2P9 285 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 MED4Q9NPJ6 270 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 ASNSD1Q9NWL6 643 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 FAM153AQ9UHL3 310 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 HTTP42858 3142 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 LRCH4O75427 683 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 KRT1P04264 644 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 OAS2P29728 719 aaKnown RBP18.19■□□□□ 0.5
PHGDH-208ENST00000641023 ECHS1P30084 290 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 GRK4P32298 578 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 GBP1P32455 592 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 AARSP49588 968 aaKnown RBP eCLIP18.19■□□□□ 0.5
PHGDH-208ENST00000641023 BCAT1P54687 386 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 PDE4CQ08493 712 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 TRIM71Q2Q1W2 868 aaKnown RBP18.19■□□□□ 0.5
PHGDH-208ENST00000641023 LHX8Q68G74 356 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 ZDHHC17Q8IUH5 632 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 MREGQ8N565 214 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 C1orf54Q8WWF1 131 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 OSBPL7Q9BZF2 842 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 TRIM31Q9BZY9 425 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 UBN1Q9NPG3 1134 aa18.19■□□□□ 0.5
PHGDH-208ENST00000641023 GOLGA6BA6NDN3 693 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 TJP3O95049 919 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 ECEL1O95672 775 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 RPL9P32969 192 aaKnown RBP18.18■□□□□ 0.5
PHGDH-208ENST00000641023 RGS7P49802 495 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 ZNF143P52747 638 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-208ENST00000641023 BST2Q10589 180 aaKnown RBP18.18■□□□□ 0.5
PHGDH-208ENST00000641023 FAM183BPQ6ZVS7 135 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 ZNF296Q8WUU4 475 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-208ENST00000641023 SLCO2A1Q92959 643 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 SLITRK1Q96PX8 696 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 ADAM2Q99965 735 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 RSAD1Q9HA92 442 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 STARD7Q9NQZ5 370 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 MIOSQ9NXC5 875 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 PIK3R2O00459 728 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 HCRTO43612 131 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 CAPN15O75808 1086 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 SCNN1GP51170 649 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 CLCNKBP51801 687 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 AFF1P51825 1210 aaKnown RBP18.18■□□□□ 0.5
PHGDH-208ENST00000641023 DSC3Q14574 896 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 ALS2CLQ60I27 953 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 RNF169Q8NCN4 708 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 GRK7Q8WTQ7 553 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 LRRC45Q96CN5 670 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 PTPN22Q9Y2R2 807 aa18.18■□□□□ 0.5
PHGDH-208ENST00000641023 BRCA2P51587 3418 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 TULP2O00295 520 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 MGEA5O60502 916 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 CKBP12277 381 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 CCDC130P13994 396 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 GPD1P21695 349 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 ADORA2BP29275 332 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 KCNJ1P48048 391 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 SLC8A3P57103 927 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 SLC25A11Q02978 314 aaKnown RBP18.17■□□□□ 0.5
PHGDH-208ENST00000641023 CCNG2Q16589 344 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 B3GALNT2Q8NCR0 500 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 SENP8Q96LD8 212 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 HERPUD2Q9BSE4 406 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 CYLDQ9NQC7 956 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 CHST7Q9NS84 486 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 KLHL11Q9NVR0 708 aa18.17■□□□□ 0.5
PHGDH-208ENST00000641023 A0A1W2PQ45 241 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-208ENST00000641023 A0A1W2PQY0 241 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 LRRD1A4D1F6 860 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 PI4K2BG5E9Z4 385 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 HSF2BPO75031 334 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 PDGFRAP16234 1089 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 DESP17661 470 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 SLC6A3Q01959 620 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 PPP1R7Q15435 360 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 TFDP3Q5H9I0 405 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 TXNRD3NBQ6F5E7 133 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 MFSD7Q6UXD7 560 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 SPOCD1Q6ZMY3 1216 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 SCUBE3Q8IX30 993 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 TMEM86AQ8N2M4 240 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 ARFGAP1Q8N6T3 406 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 ATL2Q8NHH9 583 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 SLC2A14Q8TDB8 520 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 LPIN3Q9BQK8 851 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 CNPY3Q9BT09 278 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 DCLK3Q9C098 648 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 C2CD4BA6NLJ0 364 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 H3BQF6 201 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 GABRDO14764 452 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 PTPN7P35236 360 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 PCK1P35558 622 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 LHX1P48742 406 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 SNX1Q13596 522 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 WSCD1Q658N2 575 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 OLFML1Q6UWY5 402 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 DSTYKQ6XUX3 929 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms