RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ADRA2BP18089 450 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 CCNG2Q16589 344 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 PLA2G4FQ68DD2 849 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 ARL10Q8N8L6 244 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 XXYLT1Q8NBI6 393 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 PRMT6Q96LA8 375 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-227ENST00000640957 HSD17B14Q9BPX1 270 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 YIPF2Q9BWQ6 316 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 PIH1D1Q9NWS0 290 aaKnown RBP14.37□□□□□ -0.11
SCARB2-227ENST00000640957 UVRAGQ9P2Y5 699 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 AFG3L2Q9Y4W6 797 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 ROBO3Q96MS0 1386 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 A0A0J9YVX5 310 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 ATP2A1O14983 1001 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 LIASO43766 372 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 GRIN3BO60391 1043 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 RAG1P15918 1043 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 GAP43P17677 238 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 NCF2P19878 526 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-227ENST00000640957 CAV1Q03135 178 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 DGKZQ13574 1117 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 OTOP1Q7RTM1 612 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 PTAR1Q7Z6K3 402 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-227ENST00000640957 PPP1R14CQ8TAE6 165 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 PPP2R3CQ969Q6 453 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 CCDC17Q96LX7 622 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 MAN1C1Q9NR34 630 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 STK32BQ9NY57 414 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 COL14A1Q05707 1796 aaKnown RBP14.37□□□□□ -0.11
SCARB2-227ENST00000640957 DKC1O60832 514 aaKnown RBP eCLIP14.37□□□□□ -0.11
SCARB2-227ENST00000640957 GZMAP12544 262 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 DESP17661 470 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 RPL10P27635 214 aaKnown RBP14.37□□□□□ -0.11
SCARB2-227ENST00000640957 PMLP29590 882 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 PSMC5P62195 406 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 KLF1Q13351 362 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-227ENST00000640957 PRKG1Q13976 671 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 NADK2Q4G0N4 442 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 FAM102BQ5T8I3 360 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 TRIM42Q8IWZ5 723 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 SP8Q8IXZ3 490 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 FAM71DQ8N9W8 422 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 FAM163AQ96GL9 167 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-227ENST00000640957 NT5C1BQ96P26 610 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 PCSK1NQ9UHG2 260 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 FZD1Q9UP38 647 aa14.37□□□□□ -0.11
SCARB2-227ENST00000640957 MTO1Q9Y2Z2 717 aaKnown RBP14.37□□□□□ -0.11
SCARB2-227ENST00000640957 C15orf38-AP3S2A0A0A6YYH1 394 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 TRIM49D1C9J1S8 452 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 hCG_1984214I3L0E3 225 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 ADARP55265 1226 aaKnown RBP14.36□□□□□ -0.11
SCARB2-227ENST00000640957 SNRNP35Q16560 246 aaKnown RBP14.36□□□□□ -0.11
SCARB2-227ENST00000640957 CLEC16AQ2KHT3 1053 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 KLHDC10Q6PID8 442 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 TMEM270Q6UE05 265 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 ARPINQ7Z6K5 226 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 ZNF713Q8N859 430 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-227ENST00000640957 BANPQ8N9N5 519 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 UNC45AQ9H3U1 944 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 ANLNQ9NQW6 1124 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 BLOC1S6Q9UL45 172 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 AGTPBP1Q9UPW5 1226 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 COMMD3-BMI1R4GMX3 469 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 ANKRD36CQ5JPF3 1778 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 TTLL13PA6NNM8 815 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 H3BSA7 217 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 XPO1O14980 1071 aaKnown RBP14.36□□□□□ -0.11
SCARB2-227ENST00000640957 DGKIO75912 1065 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 TCN1P20061 433 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-227ENST00000640957 ELK3P41970 407 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 HADHBP55084 474 aaKnown RBP14.36□□□□□ -0.11
SCARB2-227ENST00000640957 ACTR3P61158 418 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 FOLH1Q04609 750 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 GABPAQ06546 454 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 CYP4A22Q5TCH4 519 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 MROH9Q5TGP6 573 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 LRRC8BQ6P9F7 803 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 RHOT1Q8IXI2 618 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 CPNE9Q8IYJ1 553 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 ARHGAP24Q8N264 748 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 HELQQ8TDG4 1101 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 NR1H4Q96RI1 486 aaPredicted RBP14.36□□□□□ -0.11
SCARB2-227ENST00000640957 ZNF577Q9BSK1 485 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 SLC17A6Q9P2U8 582 aa14.36□□□□□ -0.11
SCARB2-227ENST00000640957 BUD23O43709 281 aaKnown RBP14.35□□□□□ -0.11
SCARB2-227ENST00000640957 TMEM63AO94886 807 aa14.35□□□□□ -0.11
SCARB2-227ENST00000640957 INHBAP08476 426 aa14.35□□□□□ -0.11
SCARB2-227ENST00000640957 HAUS6Q7Z4H7 955 aa14.35□□□□□ -0.11
SCARB2-227ENST00000640957 METTL25Q8N6Q8 603 aa14.35□□□□□ -0.11
SCARB2-227ENST00000640957 GRIN3AQ8TCU5 1115 aa14.35□□□□□ -0.11
SCARB2-227ENST00000640957 DDX1Q92499 740 aaKnown RBP14.35□□□□□ -0.11
SCARB2-227ENST00000640957 SHC3Q92529 594 aa14.35□□□□□ -0.11
SCARB2-227ENST00000640957 MCEEQ96PE7 176 aa14.35□□□□□ -0.11
SCARB2-227ENST00000640957 SRPK1Q96SB4 655 aaKnown RBP14.35□□□□□ -0.11
SCARB2-227ENST00000640957 INPP5FQ9Y2H2 1132 aa14.35□□□□□ -0.11
SCARB2-227ENST00000640957 GAKO14976 1311 aa14.35□□□□□ -0.11
SCARB2-227ENST00000640957 COPEO14579 308 aa14.35□□□□□ -0.11
SCARB2-227ENST00000640957 STAMBPO95630 424 aa14.35□□□□□ -0.11
SCARB2-227ENST00000640957 HIC1Q14526 733 aa14.35□□□□□ -0.11
SCARB2-227ENST00000640957 CMPK2Q5EBM0 449 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms