RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 RASAL2Q9UJF2 1139 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 PODXLO00592 558 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 DAPK3O43293 454 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 LRCH4O75427 683 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 CAPN15O75808 1086 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 KRT1P04264 644 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 CCDC130P13994 396 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 RPL9P32969 192 aaKnown RBP12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 RGS7P49802 495 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 COPS2P61201 443 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 CBX1P83916 185 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 SLC25A11Q02978 314 aaKnown RBP12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 PDE4CQ08493 712 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 BST2Q10589 180 aaKnown RBP12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 HLTFQ14527 1009 aaKnown RBP eCLIP12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 SMC1AQ14683 1233 aaKnown RBP12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 LLGL1Q15334 1064 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 ATP13A4Q4VNC1 1196 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 DUPD1Q68J44 220 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 OR6B2Q6IFH4 312 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 TRAF7Q6Q0C0 670 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 TMEM110Q86TL2 294 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 ARFGAP1Q8N6T3 406 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 ANKRD52Q8NB46 1076 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 B3GALNT2Q8NCR0 500 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 PGBD4Q96DM1 585 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 PIWIL1Q96J94 861 aaKnown RBP12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 LPIN3Q9BQK8 851 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 ERP44Q9BS26 406 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 PHF24Q9UPV7 400 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 DNAH12Q6ZR08 3092 aa12.9□□□□□ -0.34
CACNA1D-228ENST00000638120 PIK3R2O00459 728 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 GABRDO14764 452 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 FAM153BP0C7A2 387 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 PTPN7P35236 360 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 CETN2P41208 172 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 CLCNKBP51801 687 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 SNX16P57768 344 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 HTRA3P83110 453 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 GPS2Q13227 327 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 FAM153CQ494X1 144 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 WSCD1Q658N2 575 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 TXNRD3NBQ6F5E7 133 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 OLFML1Q6UWY5 402 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 ANKS1BQ7Z6G8 1248 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 DDX42Q86XP3 938 aaKnown RBP eCLIP12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 CCDC105Q8IYK2 499 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 MREGQ8N565 214 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 C3orf58Q8NDZ4 430 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 SLCO2A1Q92959 643 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 SENP8Q96LD8 212 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 SLITRK1Q96PX8 696 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 UBN1Q9NPG3 1134 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 CYLDQ9NQC7 956 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 KLHL11Q9NVR0 708 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 FAM153AQ9UHL3 310 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 TDRD15B5MCY1 1934 aaKnown RBP12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 TSC2P49815 1807 aa12.89□□□□□ -0.35
CACNA1D-228ENST00000638120 CASTOR2A6NHX0 329 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 C2CD4BA6NLJ0 364 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 KBTBD13C9JR72 458 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 PI4K2BG5E9Z4 385 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 ARVCFO00192 962 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 KRT7P08729 469 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 GPD1P21695 349 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 IGFBP6P24592 240 aaPredicted RBP12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 ADORA2BP29275 332 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 TKTP29401 623 aaKnown RBP12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 RPL34P49207 117 aaKnown RBP12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 AARSP49588 968 aaKnown RBP eCLIP12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 ZNF143P52747 638 aaPredicted RBP12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 DRG2P55039 364 aaKnown RBP12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 GRIK3Q13003 919 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 UPP1Q16831 310 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 HADHQ16836 314 aaKnown RBP12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 ZFYVE27Q5T4F4 411 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 TRNP1Q6NT89 227 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 MFSD7Q6UXD7 560 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 SPOCD1Q6ZMY3 1216 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 ZNF598Q86UK7 904 aaKnown RBP12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 ECHDC2Q86YB7 292 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 ZDHHC17Q8IUH5 632 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 TMEM86AQ8N2M4 240 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 RNF169Q8NCN4 708 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 SLC2A14Q8TDB8 520 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 HEMGNQ9BXL5 484 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 DCLK3Q9C098 648 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 NEUROG2Q9H2A3 272 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 DPH5Q9H2P9 285 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 CHST7Q9NS84 486 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 HOMER3Q9NSC5 361 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 TRIM17Q9Y577 477 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 H3BQF6 201 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 DPYSL4O14531 572 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 INPPL1O15357 1258 aa12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 PAPSS1O43252 624 aaPredicted RBP12.88□□□□□ -0.35
CACNA1D-228ENST00000638120 GABBR2O75899 941 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms