RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 CNTN1Q12860 1018 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 P3H2Q8IVL5 708 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 MICU2Q8IYU8 434 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 TNIP3Q96KP6 325 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 REEP2Q9BRK0 252 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 KDM6BO15054 1643 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 RBMXL2O75526 392 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 LTFP02788 710 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 SERPINB10P48595 397 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 NCOA4Q13772 614 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 POMZP3Q6PJE2 187 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 CLEC4GQ6UXB4 293 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 PGLYRP2Q96PD5 576 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 RAD21L1Q9H4I0 556 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 NEO1Q92859 1461 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 PPP2R2AP63151 447 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 SNAPC2Q13487 334 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 MARK2Q7KZI7 788 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 CCDC185Q8N715 623 aa17.63■□□□□ 0.41
CACNA1A-253ENST00000637927 CCL15-CCL14A0A0B4J2E2 113 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 CYP2F1P24903 491 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 RAB14P61106 215 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 COG2Q14746 738 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 CCL15Q16663 113 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 ZKSCAN4Q969J2 545 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 RBM7Q9Y580 266 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 IDH3BO43837 385 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 FAM107AO95990 144 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 NCKAP1LP55160 1127 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 TDRD10Q5VZ19 366 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 WDR36Q8NI36 951 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 APOL2Q9BQE5 337 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 DISP1Q96F81 1524 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 ERVK-7P63135 1459 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 STXBP1P61764 594 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 DMPKQ09013 629 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 CENPLQ8N0S6 344 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 CYFIP2Q96F07 1278 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 SH3D21A4FU49 640 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 CLASP2O75122 1294 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 PDGFRAP16234 1089 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 LBPP18428 481 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 PEX5P50542 639 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 PRPF39Q86UA1 669 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 PARP8Q8N3A8 854 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 RPRD1BQ9NQG5 326 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 TFR2Q9UP52 801 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 CCDC144BQ3MJ40 725 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 SHC4Q6S5L8 630 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 NEK10Q6ZWH5 1172 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 BRSK2Q8IWQ3 736 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 PROM2Q8N271 834 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 TBC1D16Q8TBP0 767 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 TADA1Q96BN2 335 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 GID8Q9NWU2 228 aa17.62■□□□□ 0.41
CACNA1A-253ENST00000637927 C18orf8Q96DM3 657 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 SENP7Q9BQF6 1050 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 OLFML3Q9NRN5 406 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 PNMA6AP0CW24 399 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 HUNKP57058 714 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 ORC2Q13416 577 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 SYBUQ9NX95 663 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 RUVBL2Q9Y230 463 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 CASTOR2A6NHX0 329 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 MTSS1LQ765P7 747 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 DPP10Q8N608 796 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 SIKE1Q9BRV8 207 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 TSPAN9O75954 239 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 VTNP04004 478 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 TAL1P17542 331 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 ATP6V1B2P21281 511 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 PRKCEQ02156 737 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 VPS37AQ8NEZ2 397 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 M0R3G1 203 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 RTN2O75298 545 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 NUDT2P50583 147 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 RABL6Q3YEC7 729 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 CDC42EP5Q6NZY7 148 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 ZNF786Q8N393 782 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 MMGT1Q8N4V1 131 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 PRPF18Q99633 342 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 KCNS3Q9BQ31 491 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 ANAPC2Q9UJX6 822 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 GH1P01241 217 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 EMC2Q15006 297 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 PPP1R26Q5T8A7 1209 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 PARGQ86W56 976 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 MB21D2Q8IYB1 491 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 NEK7Q8TDX7 302 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 FAR2Q96K12 515 aa17.61■□□□□ 0.41
CACNA1A-253ENST00000637927 FLT1P17948 1338 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 WDR19Q8NEZ3 1342 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 TK2O00142 265 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 PSMD11O00231 422 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 KCNK10P57789 538 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 CYP39A1Q9NYL5 469 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 ZNF70Q9UC06 446 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms