RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 SIGLEC16A6NMB1 481 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 NT5C1B-RDH14C9J2C7 533 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 H7C4K7 107 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 MYO1FO00160 1098 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 CLDN5O00501 218 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 ENC1O14682 589 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 XPO1O14980 1071 aaKnown RBP12.42□□□□□ -0.42
CLN6-223ENST00000637823 EFEMP2O95967 443 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 ERBB2P04626 1255 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 ATP1A1P05023 1023 aaKnown RBP12.42□□□□□ -0.42
CLN6-223ENST00000637823 FAM200BP0CF97 657 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 LAG3P18627 525 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 PLA2G4AP47712 749 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 HTRA4P83105 476 aaPredicted RBP12.42□□□□□ -0.42
CLN6-223ENST00000637823 MESDQ14696 234 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 VARS2Q5ST30 1063 aaKnown RBP12.42□□□□□ -0.42
CLN6-223ENST00000637823 PPP1R15BQ5SWA1 713 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 CYP4A22Q5TCH4 519 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 KCNT2Q6UVM3 1135 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 PEX26Q7Z412 305 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 PHLDB2Q86SQ0 1253 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 ZDHHC17Q8IUH5 632 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 DCP1BQ8IZD4 617 aaKnown RBP12.42□□□□□ -0.42
CLN6-223ENST00000637823 PHOSPHO2Q8TCD6 241 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 PCED1BQ96HM7 432 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 IGSF21Q96ID5 467 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 HSFY1Q96LI6 401 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 YME1L1Q96TA2 773 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 LBHD1Q9BQE6 289 aaPredicted RBP12.42□□□□□ -0.42
CLN6-223ENST00000637823 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLN6-223ENST00000637823 ST7Q9NRC1 585 aa12.42□□□□□ -0.42
CLN6-223ENST00000637823 TMEM191CA6NGB0 347 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 AP1G2O75843 785 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 GJB5O95377 273 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 FTCDO95954 541 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 KRT3P12035 628 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 NPR3P17342 541 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 SYN1P17600 705 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 RGS7P49802 495 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 EPHB4P54760 987 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 AMPD2Q01433 879 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 RPS6KA1Q15418 735 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 USP41Q3LFD5 358 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 CTXN3Q4LDR2 81 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 COL13A1Q5TAT6 717 aaPredicted RBP12.41□□□□□ -0.42
CLN6-223ENST00000637823 OR6B2Q6IFH4 312 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 ZNF280DQ6N043 979 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 LLGL2Q6P1M3 1020 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 C4orf50Q6ZRC1 276 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 TMCO2Q7Z6W1 182 aaPredicted RBP12.41□□□□□ -0.42
CLN6-223ENST00000637823 NT5DC3Q86UY8 548 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 FAM35AQ86V20 835 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 LRRTM3Q86VH5 581 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 CEP57Q86XR8 500 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 COLGALT1Q8NBJ5 622 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 OR10T2Q8NGX3 314 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 KCTD13Q8WZ19 329 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 DPF3Q92784 378 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 SMARCD1Q96GM5 515 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 TTPALQ9BTX7 342 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 SELENOOQ9BVL4 669 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 TLR10Q9BXR5 811 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 ZCWPW1Q9H0M4 648 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 L2HGDHQ9H9P8 463 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 AAASQ9NRG9 546 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 SPG21Q9NZD8 308 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 ANAPC7Q9UJX3 599 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 INSL6Q9Y581 213 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 ALG6Q9Y672 507 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 SAR1BQ9Y6B6 198 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 MRPL42Q9Y6G3 142 aaKnown RBP12.41□□□□□ -0.42
CLN6-223ENST00000637823 SLC4A7Q9Y6M7 1214 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 PATJQ8NI35 1801 aa12.41□□□□□ -0.42
CLN6-223ENST00000637823 TMEM110-MUSTN1A8MSY1 372 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 E5RJQ4 531 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 GOLGA8SH3BPF8 625 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 TULP2O00295 520 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 TBC1D4O60343 1298 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 GABBR2O75899 941 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 PROSCO94903 275 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 TCP1P17987 556 aaKnown RBP12.4□□□□□ -0.42
CLN6-223ENST00000637823 SCNN1AP37088 669 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 PBX3P40426 434 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 SLC1A1P43005 524 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 SLC6A3Q01959 620 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 SMARCB1Q12824 385 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 NFE2Q16621 373 aaPredicted RBP12.4□□□□□ -0.42
CLN6-223ENST00000637823 CCDC142Q17RM4 750 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 DCUN1D2Q6PH85 259 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 CLEC20AQ6ZU45 233 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 ANKS3Q6ZW76 656 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 TAS1R1Q7RTX1 841 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 SPATA2LQ8IUW3 424 aaPredicted RBP12.4□□□□□ -0.42
CLN6-223ENST00000637823 SLC39A11Q8N1S5 342 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 BCL7CQ8WUZ0 217 aaPredicted RBP12.4□□□□□ -0.42
CLN6-223ENST00000637823 MYLPFQ96A32 169 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 HES6Q96HZ4 224 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 ABHD8Q96I13 439 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 BTBD6Q96KE9 485 aa12.4□□□□□ -0.42
CLN6-223ENST00000637823 TMEM209Q96SK2 561 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms