RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 TINF2Q9BSI4 451 aa19.44■□□□□ 0.7
CTSD-212ENST00000637815 TMEM121Q9BTD3 319 aa19.44■□□□□ 0.7
CTSD-212ENST00000637815 ADAMTS10Q9H324 1103 aa19.44■□□□□ 0.7
CTSD-212ENST00000637815 ZNF408Q9H9D4 720 aa19.44■□□□□ 0.7
CTSD-212ENST00000637815 PLEKHA5Q9HAU0 1116 aa19.44■□□□□ 0.7
CTSD-212ENST00000637815 EURLQ9NYK6 297 aa19.44■□□□□ 0.7
CTSD-212ENST00000637815 CTNNAL1Q9UBT7 734 aa19.44■□□□□ 0.7
CTSD-212ENST00000637815 CDH16O75309 829 aa19.43■□□□□ 0.7
CTSD-212ENST00000637815 CPP00450 1065 aa19.43■□□□□ 0.7
CTSD-212ENST00000637815 MIPP30301 263 aa19.43■□□□□ 0.7
CTSD-212ENST00000637815 PCK1P35558 622 aa19.43■□□□□ 0.7
CTSD-212ENST00000637815 ZNF143P52747 638 aaPredicted RBP19.43■□□□□ 0.7
CTSD-212ENST00000637815 OTUD4Q01804 1114 aaKnown RBP19.43■□□□□ 0.7
CTSD-212ENST00000637815 MYO1EQ12965 1108 aa19.43■□□□□ 0.7
CTSD-212ENST00000637815 GKAP1Q5VSY0 366 aaPredicted RBP19.43■□□□□ 0.7
CTSD-212ENST00000637815 IQSEC1Q6DN90 963 aa19.43■□□□□ 0.7
CTSD-212ENST00000637815 OTUD6BQ8N6M0 293 aa19.43■□□□□ 0.7
CTSD-212ENST00000637815 ACTL9Q8TC94 416 aa19.43■□□□□ 0.7
CTSD-212ENST00000637815 TTC25Q96NG3 672 aa19.43■□□□□ 0.7
CTSD-212ENST00000637815 CCDC77Q9BR77 488 aa19.43■□□□□ 0.7
CTSD-212ENST00000637815 NT5C1AQ9BXI3 368 aa19.43■□□□□ 0.7
CTSD-212ENST00000637815 RRN3P2A6NIE6 340 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 SGK1O00141 431 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 CST8O60676 142 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 RNF8O76064 485 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 PECAM1P16284 738 aaPredicted RBP19.42■□□□□ 0.7
CTSD-212ENST00000637815 HOXA11P31270 313 aaPredicted RBP19.42■□□□□ 0.7
CTSD-212ENST00000637815 MKRN3Q13064 507 aaKnown RBP19.42■□□□□ 0.7
CTSD-212ENST00000637815 STILQ15468 1287 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 FAM102AQ5T9C2 384 aaPredicted RBP19.42■□□□□ 0.7
CTSD-212ENST00000637815 VSTM1Q6UX27 236 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 CACNA2D3Q8IZS8 1091 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 UBA3Q8TBC4 463 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 CFAP57Q96MR6 1250 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 MIS12Q9H081 205 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 ASNSD1Q9NWL6 643 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 ADCY6O43306 1168 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 TRUB2O95900 331 aaKnown RBP19.42■□□□□ 0.7
CTSD-212ENST00000637815 PLCB3Q01970 1234 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 IFT88Q13099 833 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 FAM110CQ1W6H9 321 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 PLEKHH3Q7Z736 793 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 RIBC1Q8N443 379 aaPredicted RBP19.42■□□□□ 0.7
CTSD-212ENST00000637815 PRMT1Q99873 361 aaKnown RBP19.42■□□□□ 0.7
CTSD-212ENST00000637815 CNPY3Q9BT09 278 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 SAYSD1Q9NPB0 183 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 TSPAN16Q9UKR8 245 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 USP18Q9UMW8 372 aa19.42■□□□□ 0.7
CTSD-212ENST00000637815 TRIP12Q14669 1992 aaPredicted RBP19.41■□□□□ 0.7
CTSD-212ENST00000637815 PFKMP08237 780 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 CD48P09326 243 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 DYNLT1P63172 113 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 KIZQ2M2Z5 673 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 APBB1IPQ7Z5R6 666 aaPredicted RBP19.41■□□□□ 0.7
CTSD-212ENST00000637815 PRCCQ92733 491 aaPredicted RBP19.41■□□□□ 0.7
CTSD-212ENST00000637815 SNX27Q96L92 541 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 PARK7Q99497 189 aaKnown RBP19.41■□□□□ 0.7
CTSD-212ENST00000637815 SETD4Q9NVD3 440 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 SAE1Q9UBE0 346 aaPredicted RBP19.41■□□□□ 0.7
CTSD-212ENST00000637815 FARP1Q9Y4F1 1045 aaPredicted RBP19.41■□□□□ 0.7
CTSD-212ENST00000637815 TMEM120BA0PK00 339 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 C2CD4BA6NLJ0 364 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 NPTXRO95502 500 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 GPD1P21695 349 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 LIG3P49916 1009 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 FKBP1BP68106 108 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 CDC42EP1Q00587 391 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 SLC27A1Q6PCB7 646 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 PCGF5Q86SE9 256 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 KCTD6Q8NC69 237 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 CABS1Q96KC9 395 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 PHACTR1Q9C0D0 580 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 PCSK1NQ9UHG2 260 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 NAALADL1Q9UQQ1 740 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 ACTL7BQ9Y614 415 aa19.41■□□□□ 0.7
CTSD-212ENST00000637815 E5RJQ4 531 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 APOC4-APOC2K7ER74 178 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 GPR32O75388 356 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 ENDOD1O94919 500 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 APOC2P02655 101 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 CREB1P16220 341 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 PSMC4P43686 418 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 ZBTB6Q15916 424 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 PKDCCQ504Y2 493 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 CYP4F22Q6NT55 531 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 TRNP1Q6NT89 227 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 FAM183BPQ6ZVS7 135 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 CYP4V2Q6ZWL3 525 aaPredicted RBP19.4■□□□□ 0.7
CTSD-212ENST00000637815 CYP4X1Q8N118 509 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 NPLOC4Q8TAT6 608 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 ZMAT2Q96NC0 199 aaKnown RBP19.4■□□□□ 0.7
CTSD-212ENST00000637815 PEBP4Q96S96 227 aa19.4■□□□□ 0.7
CTSD-212ENST00000637815 GCOM2Q9BZD3 368 aaPredicted RBP19.4■□□□□ 0.7
CTSD-212ENST00000637815 GBA2Q9HCG7 927 aaPredicted RBP19.4■□□□□ 0.7
CTSD-212ENST00000637815 ALOX15BO15296 676 aa19.39■□□□□ 0.69
CTSD-212ENST00000637815 FSBPO95073 299 aa19.39■□□□□ 0.69
CTSD-212ENST00000637815 IFNB1P01574 187 aa19.39■□□□□ 0.69
CTSD-212ENST00000637815 GDF10P55107 478 aa19.39■□□□□ 0.69
CTSD-212ENST00000637815 PCBP1Q15365 356 aaKnown RBP eCLIP19.39■□□□□ 0.691e-9■■■■■ 30.2
CTSD-212ENST00000637815 TAF5Q15542 800 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms