RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 FAM30AQ9NZY2 134 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 CEP72Q9P209 647 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 STK26Q9P289 416 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 CPSF2Q9P2I0 782 aaKnown RBP3.31□□□□□ -1.88
PSPC1-208ENST00000635562 PCSK1NQ9UHG2 260 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 SLC23A1Q9UHI7 598 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 AJAP1Q9UKB5 411 aaPredicted RBP3.31□□□□□ -1.88
PSPC1-208ENST00000635562 BLOC1S6Q9UL45 172 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 DMRT1Q9Y5R6 373 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 ACTL7AQ9Y615 435 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 ATAD2BQ9ULI0 1458 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 hCG_1642624A0A1W2PR95 340 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 UBE2QL1A1L167 161 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 CAPN8A6NHC0 703 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 CXorf49A8MYA2 514 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 MASP2O00187 686 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 RTCAO00442 366 aaKnown RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 PLOD2O00469 737 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 PJA2O43164 708 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 FRS3O43559 492 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 TIPRLO75663 272 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 STC2O76061 302 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 PYGLP06737 847 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 FTH1P19P0C7X4 201 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 ATP6V1B1P15313 513 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 RPS2P15880 293 aaKnown RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 MUTP22033 750 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 FBLP22087 321 aaKnown RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 IL4RP24394 825 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 PRDX5P30044 214 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 ALDH1A3P47895 512 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 TM4SF4P48230 202 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 CSE1LP55060 971 aaKnown RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 TPD52P55327 224 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 PER3P56645 1201 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 SLC20A2Q08357 652 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 PPFIA1Q13136 1202 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 TRIM14Q14142 442 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 PLS1Q14651 629 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 PSMD6Q15008 389 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 LLGL1Q15334 1064 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 CNN3Q15417 329 aaKnown RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 CSRP2Q16527 193 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 MFSD4BQ5TF39 518 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 KRT40Q6A162 431 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 DPY19L2P1Q6NXN4 242 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 IRGCQ6NXR0 463 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 TLDC1Q6P9B6 456 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 PDZD4Q76G19 769 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 DOK3Q7L591 496 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 GPRIN1Q7Z2K8 1008 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 HEATR3Q7Z4Q2 680 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 MYLK4Q86YV6 388 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 NRSN1Q8IZ57 195 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 KRT78Q8N1N4 520 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 CARNMT1Q8N4J0 409 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 NGEFQ8N5V2 710 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 MSANTD4Q8NCY6 345 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 SPATA18Q8TC71 538 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 SMCR8Q8TEV9 937 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 CCT6BQ92526 530 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 MAML1Q92585 1016 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 MIEF2Q96C03 454 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 SGCZQ96LD1 299 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 TSGA13Q96PP4 275 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 UHRF1Q96T88 793 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 VRK1Q99986 396 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 KATNAL1Q9BW62 490 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 CCDC94Q9BW85 323 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 SENP6Q9GZR1 1112 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 WDCPQ9H6R7 721 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 LMBRD1Q9NUN5 540 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 RRN3Q9NYV6 651 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 MOCS1Q9NZB8 636 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 FNIP2Q9P278 1114 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 WDR35Q9P2L0 1181 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 NFKBIL1Q9UBC1 381 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 PCDHA3Q9Y5H8 950 aa3.3□□□□□ -1.88
PSPC1-208ENST00000635562 CFAP65Q6ZU64 1925 aaKnown RBP3.3□□□□□ -1.88
PSPC1-208ENST00000635562 PNPLA7Q6ZV29 1317 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 A0A1W2PRX2 142 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 PRSS29PA6NIE9 313 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 INO80B-WBP1J3KQ70 363 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 F2RL2O00254 374 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 FOXN1O15353 648 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 TEX33O43247 280 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 HOXA3O43365 443 aaPredicted RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 SFTPCP11686 197 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 DESP17661 470 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 BTF3P20290 206 aaKnown RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 TGM1P22735 817 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 SMARCA1P28370 1054 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 STIP1P31948 543 aaKnown RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 ABCD1P33897 745 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 PTPN7P35236 360 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 CHKAP35790 457 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 STAT1P42224 750 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 PDE6CP51160 858 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 CACNB3P54284 484 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 NPEPPSP55786 919 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms