RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 MED21Q13503 144 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 COG2Q14746 738 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 R3HDM1Q15032 1099 aaKnown RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 QRICH1Q2TAL8 776 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 ZC2HC1CQ53FD0 456 aaPredicted RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 C1orf220Q5T0J3 134 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 CIAPIN1Q6FI81 312 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 KLC3Q6P597 504 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 TMEM179Q6ZVK1 233 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 OTOP1Q7RTM1 612 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 LRRC6Q86X45 466 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 CPNE8Q86YQ8 564 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 RHOT1Q8IXI2 618 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 SCYL3Q8IZE3 742 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 MCOLN2Q8IZK6 566 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 C4orf33Q8N1A6 199 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 LRRC47Q8N1G4 583 aaKnown RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 LRRC43Q8N309 656 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 ALLCQ8N6M5 410 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 RAB3IL1Q8TBN0 382 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 DGCR14Q96DF8 476 aaKnown RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 OXNAD1Q96HP4 312 aaPredicted RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 GMCL1Q96IK5 515 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 ZBED3Q96IU2 234 aaPredicted RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 BTBD6Q96KE9 485 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 KREMEN1Q96MU8 473 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 FAM161BQ96MY7 647 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 PWWP2AQ96N64 755 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 NACC1Q96RE7 527 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 TUBGCP5Q96RT8 1024 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 PHOX2BQ99453 314 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 TMEM120AQ9BXJ8 343 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 FRMD8P1Q9BZ68 369 aaPredicted RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 DNAJC17Q9NVM6 304 aaKnown RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 NDE1Q9NXR1 346 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 CNTN3Q9P232 1028 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 ANAPC7Q9UJX3 599 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 SHOC2Q9UQ13 582 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 PLXNA1Q9UIW2 1896 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 KRTAP4-8A0A0G2JLE6 195 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 IQANK1A0A1B0GTG1 560 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 USP17L15C9J2P7 530 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 USP17L13C9JLJ4 530 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 USP17L11C9JVI0 530 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 USP17L18D6R9N7 530 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 USP17L22D6RA61 530 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 USP17L17D6RBQ6 530 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 USP17L19D6RCP7 530 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 USP17L20D6RJB6 530 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 SPECC1L-ADORA2AF8WAN1 911 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 FCHO1O14526 889 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 CASQ2O14958 399 aaPredicted RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 CYP26A1O43174 497 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 LIASO43766 372 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 ZC3H11AO75152 810 aaKnown RBP eCLIP4.37□□□□□ -1.719e-9■□□□□ 9.8
PTP4A1-205ENST00000626021 ITGA2BP08514 1039 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 FAM200BP0CF97 657 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 FDX1P10109 184 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 DESP17661 470 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 POLD1P28340 1107 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 SERPINB3P29508 390 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 CHRNA5P30532 468 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 GTF2H1P32780 548 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 MXI1P50539 228 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 CYP2J2P51589 502 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 NEK3P51956 506 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 RBM5P52756 815 aaKnown RBP eCLIP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 ZBTB16Q05516 673 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 ADCY1Q08828 1119 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 USP17L24Q0WX57 530 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 CDC16Q13042 620 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 TRIP13Q15645 432 aaPredicted RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 DBN1Q16643 649 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 P3H1Q32P28 736 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 CERKLQ49MI3 558 aaPredicted RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 PRR16Q569H4 304 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 HSP90AA5PQ58FG0 334 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 ACBD5Q5T8D3 534 aaPredicted RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 RNASEH2BQ5TBB1 312 aaKnown RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 TTBK2Q6IQ55 1244 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 BORAQ6PGQ7 559 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 USP17L6PQ6QN14 398 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 IZUMO2Q6UXV1 221 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 SH2D5Q6ZV89 423 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 KIAA0825Q8IV33 1275 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 PASD1Q8IV76 773 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 RCOR2Q8IZ40 523 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 RTKN2Q8IZC4 609 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 XXYLT1Q8NBI6 393 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 OR6Y1Q8NGX8 325 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 DTX3LQ8TDB6 740 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 HELQQ8TDG4 1101 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 TCP10LQ8TDR4 215 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 ATG4AQ8WYN0 398 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 JADE3Q92613 823 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 APBB2Q92870 758 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 LENG1Q96BZ8 264 aaPredicted RBP4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 C7orf26Q96N11 449 aa4.37□□□□□ -1.71
PTP4A1-205ENST00000626021 ACCSQ96QU6 501 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms